RNA–Protein interactions for RNA: ENST00000579727.5

RARA-209, Transcript of retinoic acid receptor alpha, humanhuman

TSL 4

Gene RARA, Length 564 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-209ENST00000579727 PRO0628Q9UI54 55 aa6.06□□□□□ -1.44
RARA-209ENST00000579727 KRTAP19-5Q3LI72 72 aa6.05□□□□□ -1.44
RARA-209ENST00000579727 LCE3AQ5TA76 89 aa6.02□□□□□ -1.45
RARA-209ENST00000579727 KRTAP19-3Q7Z4W3 81 aa5.96□□□□□ -1.46
RARA-209ENST00000579727 A6NED7 52 aa5.94□□□□□ -1.46
RARA-209ENST00000579727 LCE5AQ5TCM9 118 aa5.94□□□□□ -1.46
RARA-209ENST00000579727 HMCN1Q96RW7 5635 aa5.93□□□□□ -1.46
RARA-209ENST00000579727 K7ERS5 55 aa5.93□□□□□ -1.46
RARA-209ENST00000579727 AHNAK2Q8IVF2 5795 aa5.89□□□□□ -1.47
RARA-209ENST00000579727 MT1LQ93083 61 aa5.83□□□□□ -1.48
RARA-209ENST00000579727 LCE1DQ5T752 114 aa5.82□□□□□ -1.48
RARA-209ENST00000579727 MT1GP13640 62 aa5.81□□□□□ -1.48
RARA-209ENST00000579727 KRTAP25-1Q3LHN0 102 aa5.8□□□□□ -1.48
RARA-209ENST00000579727 MT1MQ8N339 61 aa5.77□□□□□ -1.49
RARA-209ENST00000579727 KRTAP5-10Q6L8G5 202 aa5.76□□□□□ -1.49
RARA-209ENST00000579727 PP632Q6XCG6 107 aa5.76□□□□□ -1.49
RARA-209ENST00000579727 KRTAP12-3P60328 96 aa5.75□□□□□ -1.49
RARA-209ENST00000579727 KRTAP4-3Q9BYR4 195 aa5.69□□□□□ -1.5
RARA-209ENST00000579727 PMAIP1Q13794 54 aa5.68□□□□□ -1.5
RARA-209ENST00000579727 MT4P47944 62 aa5.67□□□□□ -1.5
RARA-209ENST00000579727 BRK1Q8WUW1 75 aa5.67□□□□□ -1.5
RARA-209ENST00000579727 CDC42SE1Q9NRR8 79 aa5.67□□□□□ -1.5
RARA-209ENST00000579727 KRTAP4-7Q9BYR0 210 aa5.62□□□□□ -1.51
RARA-209ENST00000579727 ROMO1P60602 79 aa5.6□□□□□ -1.51
RARA-209ENST00000579727 KRTAP5-7Q6L8G8 165 aa5.6□□□□□ -1.51
RARA-209ENST00000579727 LCE4AQ5TA78 99 aa5.57□□□□□ -1.52
RARA-209ENST00000579727 KRTAP23-1A1A580 65 aa5.53□□□□□ -1.52
RARA-209ENST00000579727 KTN1-AS1Q86SY8 53 aa5.49□□□□□ -1.53
RARA-209ENST00000579727 KRTAP5-3Q6L8H2 238 aa5.46□□□□□ -1.54
RARA-209ENST00000579727 KRTAP4-6Q9BYQ5 205 aa5.46□□□□□ -1.54
RARA-209ENST00000579727 KRTAP15-1Q3LI76 137 aa5.43□□□□□ -1.54
RARA-209ENST00000579727 SPRR5A0A1B0GTR4 108 aa5.42□□□□□ -1.54
RARA-209ENST00000579727 KRTAP5-4Q6L8H1 288 aa5.39□□□□□ -1.55
RARA-209ENST00000579727 LOC100996750A0A140TA64 210 aa5.31□□□□□ -1.56
RARA-209ENST00000579727 LCE3CQ5T5A8 94 aa5.31□□□□□ -1.56
RARA-209ENST00000579727 KRTAP19-4Q3LI73 84 aa5.29□□□□□ -1.56
RARA-209ENST00000579727 KRTAP5-5Q701N2 237 aaPredicted RBP5.25□□□□□ -1.57
RARA-209ENST00000579727 KRTAP20-2Q3LI61 65 aa5.14□□□□□ -1.59
RARA-209ENST00000579727 AHNAKQ09666 5890 aaKnown RBP5.06□□□□□ -1.6
RARA-209ENST00000579727 KRTAP9-6A8MVA2 160 aa5.05□□□□□ -1.6
RARA-209ENST00000579727 KRTAP12-4P60329 112 aa5.04□□□□□ -1.6
RARA-209ENST00000579727 SYNE1Q8NF91 8797 aaKnown RBP5.01□□□□□ -1.61
RARA-209ENST00000579727 MT1AP04731 61 aa4.95□□□□□ -1.62
RARA-209ENST00000579727 MUC5ACP98088 5654 aa4.95□□□□□ -1.62
RARA-209ENST00000579727 KRTAP6-1Q3LI64 71 aa4.94□□□□□ -1.62
RARA-209ENST00000579727 H3BS24 57 aa4.93□□□□□ -1.62
RARA-209ENST00000579727 MUC5BQ9HC84 5762 aaPredicted RBP4.92□□□□□ -1.62
RARA-209ENST00000579727 PRAC1Q96KF2 57 aa4.87□□□□□ -1.63
RARA-209ENST00000579727 KRTAP4-11Q9BYQ6 195 aa4.85□□□□□ -1.63
RARA-209ENST00000579727 KRTAP5-8O75690 187 aa4.76□□□□□ -1.65
RARA-209ENST00000579727 KRTAP9-4Q9BYQ2 154 aa4.76□□□□□ -1.65
RARA-209ENST00000579727 KRTAP5-2Q701N4 177 aa4.72□□□□□ -1.65
RARA-209ENST00000579727 KRTAP6-2Q3LI66 62 aa4.68□□□□□ -1.66
RARA-209ENST00000579727 OBSCNQ5VST9 7968 aa4.59□□□□□ -1.68
RARA-209ENST00000579727 KRTAP9-9Q9BYP9 154 aa4.55□□□□□ -1.68
RARA-209ENST00000579727 MT3P25713 68 aa4.51□□□□□ -1.69
RARA-209ENST00000579727 NDUFAF8A1L188 74 aa4.28□□□□□ -1.72
RARA-209ENST00000579727 KRTAP5-1Q6L8H4 278 aa4.27□□□□□ -1.73
RARA-209ENST00000579727 A0A0A0MQY5 61 aa4.23□□□□□ -1.73
RARA-209ENST00000579727 LUZP6Q538Z0 58 aa4.14□□□□□ -1.75
RARA-209ENST00000579727 LCE1EQ5T753 118 aa4.05□□□□□ -1.76
RARA-209ENST00000579727 LCE1BQ5T7P3 118 aa3.9□□□□□ -1.79
RARA-209ENST00000579727 LCE3DQ9BYE3 92 aa3.87□□□□□ -1.79
RARA-209ENST00000579727 KRTAP4-2Q9BYR5 136 aa3.86□□□□□ -1.79
RARA-209ENST00000579727 INE1O15225 51 aa3.8□□□□□ -1.8
RARA-209ENST00000579727 LCE1CQ5T751 118 aa3.77□□□□□ -1.81
RARA-209ENST00000579727 LCE3EQ5T5B0 92 aa3.67□□□□□ -1.82
RARA-209ENST00000579727 KRTAP4-12Q9BQ66 201 aa3.62□□□□□ -1.83
RARA-209ENST00000579727 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.44□□□□□ -1.86
RARA-209ENST00000579727 KRTAP5-11Q6L8G4 156 aa3.41□□□□□ -1.86
RARA-209ENST00000579727 PHGR1C9JFL3 82 aa3.37□□□□□ -1.87
RARA-209ENST00000579727 LCE1FQ5T754 118 aa3.29□□□□□ -1.88
RARA-209ENST00000579727 KRTAP21-2Q3LI59 83 aa3.23□□□□□ -1.89
RARA-209ENST00000579727 KRTAP4-4Q9BYR3 166 aa3□□□□□ -1.93
RARA-209ENST00000579727 PRM1P04553 51 aa2.9□□□□□ -1.95
RARA-209ENST00000579727 MUC19Q7Z5P9 8384 aa2.89□□□□□ -1.95
RARA-209ENST00000579727 KRTAP21-1Q3LI58 79 aa2.53□□□□□ -2
RARA-209ENST00000579727 MUC16Q8WXI7 14507 aa2□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 37.2 ms