RNA–Protein interactions for RNA: ENST00000579609.5

PPP4R1-213, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-213ENST00000579609 KRTAP10-5P60370 271 aa3.6□□□□□ -1.83
PPP4R1-213ENST00000579609 MT1XP80297 61 aa3.6□□□□□ -1.83
PPP4R1-213ENST00000579609 KRTAP8-1Q8IUC2 63 aa3.58□□□□□ -1.84
PPP4R1-213ENST00000579609 LCE1FQ5T754 118 aa3.57□□□□□ -1.84
PPP4R1-213ENST00000579609 SPRR5A0A1B0GTR4 108 aa3.53□□□□□ -1.84
PPP4R1-213ENST00000579609 LCE3AQ5TA76 89 aa3.52□□□□□ -1.85
PPP4R1-213ENST00000579609 KRTAP10-12P60413 245 aa3.51□□□□□ -1.85
PPP4R1-213ENST00000579609 LUZP6Q538Z0 58 aa3.49□□□□□ -1.85
PPP4R1-213ENST00000579609 KRTAP12-3P60328 96 aa3.42□□□□□ -1.86
PPP4R1-213ENST00000579609 KRTAP10-7P60409 375 aaPredicted RBP3.41□□□□□ -1.86
PPP4R1-213ENST00000579609 SSPOA2VEC9 5147 aa3.39□□□□□ -1.87
PPP4R1-213ENST00000579609 FCGBPQ9Y6R7 5405 aaPredicted RBP3.38□□□□□ -1.87
PPP4R1-213ENST00000579609 USH2AO75445 5202 aa3.34□□□□□ -1.87
PPP4R1-213ENST00000579609 KRTAP19-6Q3LI70 58 aa3.34□□□□□ -1.87
PPP4R1-213ENST00000579609 LCE3CQ5T5A8 94 aa3.33□□□□□ -1.88
PPP4R1-213ENST00000579609 SYNE2Q8WXH0 6885 aaKnown RBP3.33□□□□□ -1.88
PPP4R1-213ENST00000579609 MACF1Q9UPN3 7388 aaKnown RBP3.31□□□□□ -1.88
PPP4R1-213ENST00000579609 KRTAP19-5Q3LI72 72 aa3.27□□□□□ -1.89
PPP4R1-213ENST00000579609 KRTAP6-3Q3LI67 103 aa3.24□□□□□ -1.89
PPP4R1-213ENST00000579609 KRTAP19-7Q3SYF9 63 aa3.21□□□□□ -1.9
PPP4R1-213ENST00000579609 MT1EP04732 61 aa3.16□□□□□ -1.9
PPP4R1-213ENST00000579609 KRTAP20-1Q3LI63 56 aa3.16□□□□□ -1.9
PPP4R1-213ENST00000579609 LCE1EQ5T753 118 aa3.16□□□□□ -1.9
PPP4R1-213ENST00000579609 MT1LQ93083 61 aa3.13□□□□□ -1.91
PPP4R1-213ENST00000579609 NEBP20929 6669 aa3.13□□□□□ -1.91
PPP4R1-213ENST00000579609 MUC12Q9UKN1 5478 aa3.07□□□□□ -1.92
PPP4R1-213ENST00000579609 LCE3EQ5T5B0 92 aa3.05□□□□□ -1.92
PPP4R1-213ENST00000579609 MT1GP13640 62 aa3.04□□□□□ -1.92
PPP4R1-213ENST00000579609 KRTAP5-11Q6L8G4 156 aa3.04□□□□□ -1.92
PPP4R1-213ENST00000579609 INE1O15225 51 aa3.02□□□□□ -1.93
PPP4R1-213ENST00000579609 KRTAP19-3Q7Z4W3 81 aa3.01□□□□□ -1.93
PPP4R1-213ENST00000579609 KRTAP2-3P0C7H8 128 aa2.99□□□□□ -1.93
PPP4R1-213ENST00000579609 KRTAP2-4Q9BYR9 128 aa2.99□□□□□ -1.93
PPP4R1-213ENST00000579609 KMT2DO14686 5537 aa2.98□□□□□ -1.93
PPP4R1-213ENST00000579609 KRTAP9-6A8MVA2 160 aa2.97□□□□□ -1.93
PPP4R1-213ENST00000579609 MT1MQ8N339 61 aa2.96□□□□□ -1.94
PPP4R1-213ENST00000579609 KRTAP2-1Q9BYU5 128 aa2.96□□□□□ -1.94
PPP4R1-213ENST00000579609 KRTAP5-9P26371 169 aa2.95□□□□□ -1.94
PPP4R1-213ENST00000579609 MDN1Q9NU22 5596 aa2.94□□□□□ -1.94
PPP4R1-213ENST00000579609 SPRR2FQ96RM1 72 aa2.9□□□□□ -1.95
PPP4R1-213ENST00000579609 SPRR2EP22531 72 aa2.83□□□□□ -1.96
PPP4R1-213ENST00000579609 SPRR2BP35325 72 aa2.83□□□□□ -1.96
PPP4R1-213ENST00000579609 SPRR2AP35326 72 aa2.83□□□□□ -1.96
PPP4R1-213ENST00000579609 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.77□□□□□ -1.97
PPP4R1-213ENST00000579609 KRTAP4-3Q9BYR4 195 aa2.77□□□□□ -1.97
PPP4R1-213ENST00000579609 GPR98Q8WXG9 6306 aa2.76□□□□□ -1.97
PPP4R1-213ENST00000579609 SPRR2DP22532 72 aa2.74□□□□□ -1.97
PPP4R1-213ENST00000579609 MT1AP04731 61 aa2.7□□□□□ -1.98
PPP4R1-213ENST00000579609 KRTAP5-5Q701N2 237 aaPredicted RBP2.68□□□□□ -1.98
PPP4R1-213ENST00000579609 DSTQ03001 7570 aaKnown RBP2.61□□□□□ -1.99
PPP4R1-213ENST00000579609 LCE3DQ9BYE3 92 aa2.59□□□□□ -1.99
PPP4R1-213ENST00000579609 KRTAP6-1Q3LI64 71 aa2.58□□□□□ -2
PPP4R1-213ENST00000579609 KRTAP5-4Q6L8H1 288 aa2.49□□□□□ -2.01
PPP4R1-213ENST00000579609 KRTAP12-4P60329 112 aa2.48□□□□□ -2.01
PPP4R1-213ENST00000579609 KRTAP5-10Q6L8G5 202 aa2.48□□□□□ -2.01
PPP4R1-213ENST00000579609 KRTAP5-1Q6L8H4 278 aa2.48□□□□□ -2.01
PPP4R1-213ENST00000579609 AHNAK2Q8IVF2 5795 aa2.46□□□□□ -2.02
PPP4R1-213ENST00000579609 HMCN1Q96RW7 5635 aa2.45□□□□□ -2.02
PPP4R1-213ENST00000579609 KRTAP5-7Q6L8G8 165 aa2.43□□□□□ -2.02
PPP4R1-213ENST00000579609 MT4P47944 62 aa2.42□□□□□ -2.02
PPP4R1-213ENST00000579609 KRTAP6-2Q3LI66 62 aa2.34□□□□□ -2.03
PPP4R1-213ENST00000579609 SYNE1Q8NF91 8797 aaKnown RBP2.34□□□□□ -2.04
PPP4R1-213ENST00000579609 KRTAP4-4Q9BYR3 166 aa2.33□□□□□ -2.04
PPP4R1-213ENST00000579609 OBSCNQ5VST9 7968 aa2.32□□□□□ -2.04
PPP4R1-213ENST00000579609 KRTAP5-2Q701N4 177 aa2.29□□□□□ -2.04
PPP4R1-213ENST00000579609 KRTAP20-2Q3LI61 65 aa2.27□□□□□ -2.05
PPP4R1-213ENST00000579609 PRM1P04553 51 aa2.14□□□□□ -2.07
PPP4R1-213ENST00000579609 LCE1CQ5T751 118 aa2.12□□□□□ -2.07
PPP4R1-213ENST00000579609 LCE1BQ5T7P3 118 aa2.12□□□□□ -2.07
PPP4R1-213ENST00000579609 AHNAKQ09666 5890 aaKnown RBP2.11□□□□□ -2.07
PPP4R1-213ENST00000579609 MUC5ACP98088 5654 aa2.09□□□□□ -2.08
PPP4R1-213ENST00000579609 MUC5BQ9HC84 5762 aaPredicted RBP2.08□□□□□ -2.08
PPP4R1-213ENST00000579609 KRTAP5-8O75690 187 aa2.04□□□□□ -2.08
PPP4R1-213ENST00000579609 MUC19Q7Z5P9 8384 aa1.76□□□□□ -2.13
PPP4R1-213ENST00000579609 KRTAP21-2Q3LI59 83 aa1.72□□□□□ -2.13
PPP4R1-213ENST00000579609 PHGR1C9JFL3 82 aa1.47□□□□□ -2.17
PPP4R1-213ENST00000579609 KRTAP21-1Q3LI58 79 aa1.42□□□□□ -2.18
PPP4R1-213ENST00000579609 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 12.7 ms