RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 KRTAP23-1A1A580 65 aa5.43□□□□□ -1.54
MKS1-207ENST00000578789 UQCR11O14957 56 aa5.42□□□□□ -1.54
MKS1-207ENST00000578789 MT1EP04732 61 aa5.39□□□□□ -1.55
MKS1-207ENST00000578789 C10orf95Q9H7T3 257 aa5.39□□□□□ -1.55
MKS1-207ENST00000578789 KRTAP2-2Q9BYT5 123 aa5.36□□□□□ -1.55
MKS1-207ENST00000578789 KRTAP2-1Q9BYU5 128 aa5.36□□□□□ -1.55
MKS1-207ENST00000578789 TNP1P09430 55 aa5.33□□□□□ -1.56
MKS1-207ENST00000578789 V9GYY9 64 aa5.33□□□□□ -1.56
MKS1-207ENST00000578789 KRTAP19-5Q3LI72 72 aa5.32□□□□□ -1.56
MKS1-207ENST00000578789 Q1T7F1 81 aa5.31□□□□□ -1.56
MKS1-207ENST00000578789 KRTAP19-3Q7Z4W3 81 aa5.31□□□□□ -1.56
MKS1-207ENST00000578789 MIR22HGQ0VDD5 57 aa5.3□□□□□ -1.56
MKS1-207ENST00000578789 LCE3AQ5TA76 89 aa5.26□□□□□ -1.57
MKS1-207ENST00000578789 PSPHP1O15172 72 aa5.25□□□□□ -1.57
MKS1-207ENST00000578789 MT1GP13640 62 aa5.19□□□□□ -1.58
MKS1-207ENST00000578789 K7ERS5 55 aa5.17□□□□□ -1.58
MKS1-207ENST00000578789 MT1LQ93083 61 aa5.17□□□□□ -1.58
MKS1-207ENST00000578789 PCP4P48539 62 aa5.16□□□□□ -1.58
MKS1-207ENST00000578789 GPR98Q8WXG9 6306 aa5.16□□□□□ -1.58
MKS1-207ENST00000578789 RPS28P62857 69 aaKnown RBP5.14□□□□□ -1.59
MKS1-207ENST00000578789 PP632Q6XCG6 107 aa5.14□□□□□ -1.59
MKS1-207ENST00000578789 DSTQ03001 7570 aaKnown RBP5.12□□□□□ -1.59
MKS1-207ENST00000578789 KRTAP25-1Q3LHN0 102 aa5.12□□□□□ -1.59
MKS1-207ENST00000578789 MT1MQ8N339 61 aa5.11□□□□□ -1.59
MKS1-207ENST00000578789 A6NED7 52 aa5.09□□□□□ -1.59
MKS1-207ENST00000578789 KRTAP12-3P60328 96 aa5.07□□□□□ -1.6
MKS1-207ENST00000578789 KRTAP4-3Q9BYR4 195 aa4.96□□□□□ -1.62
MKS1-207ENST00000578789 CDC42SE1Q9NRR8 79 aa4.92□□□□□ -1.62
MKS1-207ENST00000578789 SVIPQ8NHG7 77 aa4.88□□□□□ -1.63
MKS1-207ENST00000578789 ROMO1P60602 79 aa4.85□□□□□ -1.63
MKS1-207ENST00000578789 KRTAP5-4Q6L8H1 288 aa4.82□□□□□ -1.64
MKS1-207ENST00000578789 MT4P47944 62 aa4.75□□□□□ -1.65
MKS1-207ENST00000578789 HMCN1Q96RW7 5635 aa4.72□□□□□ -1.65
MKS1-207ENST00000578789 KRTAP5-5Q701N2 237 aaPredicted RBP4.7□□□□□ -1.66
MKS1-207ENST00000578789 LCE3CQ5T5A8 94 aa4.68□□□□□ -1.66
MKS1-207ENST00000578789 KRTAP5-10Q6L8G5 202 aa4.65□□□□□ -1.67
MKS1-207ENST00000578789 AHNAK2Q8IVF2 5795 aa4.63□□□□□ -1.67
MKS1-207ENST00000578789 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.56□□□□□ -1.68
MKS1-207ENST00000578789 KRTAP5-11Q6L8G4 156 aa4.53□□□□□ -1.68
MKS1-207ENST00000578789 SPRR5A0A1B0GTR4 108 aa4.52□□□□□ -1.69
MKS1-207ENST00000578789 KRTAP20-2Q3LI61 65 aa4.52□□□□□ -1.69
MKS1-207ENST00000578789 KRTAP5-7Q6L8G8 165 aa4.52□□□□□ -1.69
MKS1-207ENST00000578789 KRTAP12-4P60329 112 aa4.5□□□□□ -1.69
MKS1-207ENST00000578789 BRK1Q8WUW1 75 aa4.49□□□□□ -1.69
MKS1-207ENST00000578789 SYNE1Q8NF91 8797 aaKnown RBP4.46□□□□□ -1.7
MKS1-207ENST00000578789 KRTAP9-6A8MVA2 160 aa4.42□□□□□ -1.7
MKS1-207ENST00000578789 MT1AP04731 61 aa4.41□□□□□ -1.7
MKS1-207ENST00000578789 KRTAP6-1Q3LI64 71 aa4.36□□□□□ -1.71
MKS1-207ENST00000578789 LCE1EQ5T753 118 aa4.35□□□□□ -1.71
MKS1-207ENST00000578789 KRTAP5-2Q701N4 177 aa4.26□□□□□ -1.73
MKS1-207ENST00000578789 PMAIP1Q13794 54 aa4.22□□□□□ -1.73
MKS1-207ENST00000578789 MT3P25713 68 aa4.18□□□□□ -1.74
MKS1-207ENST00000578789 KRTAP6-2Q3LI66 62 aa4.12□□□□□ -1.75
MKS1-207ENST00000578789 PRAC1Q96KF2 57 aa4.06□□□□□ -1.76
MKS1-207ENST00000578789 PRO0628Q9UI54 55 aa4.02□□□□□ -1.77
MKS1-207ENST00000578789 KRTAP5-1Q6L8H4 278 aa3.98□□□□□ -1.77
MKS1-207ENST00000578789 KRTAP5-8O75690 187 aa3.95□□□□□ -1.78
MKS1-207ENST00000578789 AHNAKQ09666 5890 aaKnown RBP3.91□□□□□ -1.78
MKS1-207ENST00000578789 MUC5ACP98088 5654 aa3.89□□□□□ -1.79
MKS1-207ENST00000578789 OBSCNQ5VST9 7968 aa3.87□□□□□ -1.79
MKS1-207ENST00000578789 KTN1-AS1Q86SY8 53 aa3.84□□□□□ -1.79
MKS1-207ENST00000578789 MUC5BQ9HC84 5762 aaPredicted RBP3.83□□□□□ -1.8
MKS1-207ENST00000578789 KRTAP4-4Q9BYR3 166 aa3.81□□□□□ -1.8
MKS1-207ENST00000578789 A0A0A0MQY5 61 aa3.78□□□□□ -1.8
MKS1-207ENST00000578789 LCE1FQ5T754 118 aa3.65□□□□□ -1.83
MKS1-207ENST00000578789 LUZP6Q538Z0 58 aa3.4□□□□□ -1.87
MKS1-207ENST00000578789 LCE1CQ5T751 118 aa3.4□□□□□ -1.87
MKS1-207ENST00000578789 LCE1BQ5T7P3 118 aa3.4□□□□□ -1.87
MKS1-207ENST00000578789 LCE3DQ9BYE3 92 aa3.39□□□□□ -1.87
MKS1-207ENST00000578789 LCE3EQ5T5B0 92 aa3.22□□□□□ -1.89
MKS1-207ENST00000578789 NDUFAF8A1L188 74 aa3.15□□□□□ -1.91
MKS1-207ENST00000578789 KRTAP21-2Q3LI59 83 aa2.88□□□□□ -1.95
MKS1-207ENST00000578789 PHGR1C9JFL3 82 aa2.68□□□□□ -1.98
MKS1-207ENST00000578789 PRM1P04553 51 aa2.48□□□□□ -2.01
MKS1-207ENST00000578789 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
MKS1-207ENST00000578789 INE1O15225 51 aa2.3□□□□□ -2.04
MKS1-207ENST00000578789 KRTAP21-1Q3LI58 79 aa2.03□□□□□ -2.08
MKS1-207ENST00000578789 MUC16Q8WXI7 14507 aa1.7□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 100.4 ms