RNA–Protein interactions for RNA: ENST00000578609.1

SLC6A4-204, Transcript of solute carrier family 6 member 4, humanhuman

TSL 4

Gene SLC6A4, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-204ENST00000578609 C10orf95Q9H7T3 257 aa5.79□□□□□ -1.48
SLC6A4-204ENST00000578609 KRTAP20-1Q3LI63 56 aa5.75□□□□□ -1.49
SLC6A4-204ENST00000578609 KRTAP19-7Q3SYF9 63 aa5.74□□□□□ -1.49
SLC6A4-204ENST00000578609 TNP1P09430 55 aa5.72□□□□□ -1.49
SLC6A4-204ENST00000578609 MT1EP04732 61 aa5.68□□□□□ -1.5
SLC6A4-204ENST00000578609 KRTAP2-3P0C7H8 128 aa5.66□□□□□ -1.5
SLC6A4-204ENST00000578609 SPRR2DP22532 72 aa5.66□□□□□ -1.5
SLC6A4-204ENST00000578609 KRTAP2-4Q9BYR9 128 aa5.66□□□□□ -1.5
SLC6A4-204ENST00000578609 K7ERS5 55 aa5.65□□□□□ -1.5
SLC6A4-204ENST00000578609 A6NED7 52 aa5.64□□□□□ -1.51
SLC6A4-204ENST00000578609 KRTAP19-5Q3LI72 72 aa5.63□□□□□ -1.51
SLC6A4-204ENST00000578609 LCE3AQ5TA76 89 aa5.62□□□□□ -1.51
SLC6A4-204ENST00000578609 KRTAP19-3Q7Z4W3 81 aa5.57□□□□□ -1.52
SLC6A4-204ENST00000578609 KRTAP25-1Q3LHN0 102 aa5.53□□□□□ -1.52
SLC6A4-204ENST00000578609 KRTAP2-2Q9BYT5 123 aa5.5□□□□□ -1.53
SLC6A4-204ENST00000578609 KRTAP2-1Q9BYU5 128 aa5.5□□□□□ -1.53
SLC6A4-204ENST00000578609 MT1GP13640 62 aa5.46□□□□□ -1.54
SLC6A4-204ENST00000578609 MT1LQ93083 61 aa5.46□□□□□ -1.54
SLC6A4-204ENST00000578609 CDC42SE1Q9NRR8 79 aa5.46□□□□□ -1.54
SLC6A4-204ENST00000578609 KRTAP12-3P60328 96 aa5.41□□□□□ -1.54
SLC6A4-204ENST00000578609 PP632Q6XCG6 107 aa5.41□□□□□ -1.54
SLC6A4-204ENST00000578609 MT1MQ8N339 61 aa5.38□□□□□ -1.55
SLC6A4-204ENST00000578609 DSTQ03001 7570 aaKnown RBP5.37□□□□□ -1.55
SLC6A4-204ENST00000578609 KRTAP23-1A1A580 65 aa5.35□□□□□ -1.55
SLC6A4-204ENST00000578609 ROMO1P60602 79 aa5.33□□□□□ -1.56
SLC6A4-204ENST00000578609 KRTAP4-3Q9BYR4 195 aa5.22□□□□□ -1.57
SLC6A4-204ENST00000578609 KRTAP15-1Q3LI76 137 aa5.14□□□□□ -1.59
SLC6A4-204ENST00000578609 BRK1Q8WUW1 75 aa5.09□□□□□ -1.59
SLC6A4-204ENST00000578609 KRTAP5-4Q6L8H1 288 aa5.02□□□□□ -1.61
SLC6A4-204ENST00000578609 LCE3CQ5T5A8 94 aa5□□□□□ -1.61
SLC6A4-204ENST00000578609 KRTAP5-5Q701N2 237 aaPredicted RBP4.94□□□□□ -1.62
SLC6A4-204ENST00000578609 MT4P47944 62 aa4.92□□□□□ -1.62
SLC6A4-204ENST00000578609 HMCN1Q96RW7 5635 aa4.92□□□□□ -1.62
SLC6A4-204ENST00000578609 PMAIP1Q13794 54 aa4.79□□□□□ -1.64
SLC6A4-204ENST00000578609 H3BS24 57 aa4.76□□□□□ -1.65
SLC6A4-204ENST00000578609 KRTAP9-6A8MVA2 160 aa4.74□□□□□ -1.65
SLC6A4-204ENST00000578609 GPR98Q8WXG9 6306 aa4.74□□□□□ -1.65
SLC6A4-204ENST00000578609 SPRR5A0A1B0GTR4 108 aa4.71□□□□□ -1.66
SLC6A4-204ENST00000578609 SYNE1Q8NF91 8797 aaKnown RBP4.7□□□□□ -1.66
SLC6A4-204ENST00000578609 KRTAP12-4P60329 112 aa4.7□□□□□ -1.66
SLC6A4-204ENST00000578609 KRTAP20-2Q3LI61 65 aa4.7□□□□□ -1.66
SLC6A4-204ENST00000578609 MT1AP04731 61 aa4.66□□□□□ -1.66
SLC6A4-204ENST00000578609 AHNAK2Q8IVF2 5795 aa4.64□□□□□ -1.67
SLC6A4-204ENST00000578609 PRO0628Q9UI54 55 aa4.64□□□□□ -1.67
SLC6A4-204ENST00000578609 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.63□□□□□ -1.67
SLC6A4-204ENST00000578609 KRTAP6-1Q3LI64 71 aa4.6□□□□□ -1.67
SLC6A4-204ENST00000578609 PRAC1Q96KF2 57 aa4.57□□□□□ -1.68
SLC6A4-204ENST00000578609 KRTAP5-10Q6L8G5 202 aa4.51□□□□□ -1.69
SLC6A4-204ENST00000578609 KRTAP5-2Q701N4 177 aa4.45□□□□□ -1.7
SLC6A4-204ENST00000578609 KTN1-AS1Q86SY8 53 aa4.4□□□□□ -1.71
SLC6A4-204ENST00000578609 KRTAP5-11Q6L8G4 156 aa4.36□□□□□ -1.71
SLC6A4-204ENST00000578609 KRTAP6-2Q3LI66 62 aa4.34□□□□□ -1.71
SLC6A4-204ENST00000578609 KRTAP5-7Q6L8G8 165 aa4.31□□□□□ -1.72
SLC6A4-204ENST00000578609 MT3P25713 68 aa4.23□□□□□ -1.73
SLC6A4-204ENST00000578609 SVIPQ8NHG7 77 aa4.16□□□□□ -1.74
SLC6A4-204ENST00000578609 KRTAP5-8O75690 187 aa4.09□□□□□ -1.75
SLC6A4-204ENST00000578609 OBSCNQ5VST9 7968 aa4.06□□□□□ -1.76
SLC6A4-204ENST00000578609 LCE1EQ5T753 118 aa3.96□□□□□ -1.78
SLC6A4-204ENST00000578609 KRTAP5-1Q6L8H4 278 aa3.96□□□□□ -1.78
SLC6A4-204ENST00000578609 MUC5ACP98088 5654 aa3.83□□□□□ -1.8
SLC6A4-204ENST00000578609 KRTAP4-4Q9BYR3 166 aa3.83□□□□□ -1.8
SLC6A4-204ENST00000578609 LUZP6Q538Z0 58 aa3.81□□□□□ -1.8
SLC6A4-204ENST00000578609 MUC5BQ9HC84 5762 aaPredicted RBP3.8□□□□□ -1.8
SLC6A4-204ENST00000578609 AHNAKQ09666 5890 aaKnown RBP3.76□□□□□ -1.81
SLC6A4-204ENST00000578609 LCE3DQ9BYE3 92 aa3.64□□□□□ -1.83
SLC6A4-204ENST00000578609 LCE1CQ5T751 118 aa3.58□□□□□ -1.84
SLC6A4-204ENST00000578609 LCE1BQ5T7P3 118 aa3.58□□□□□ -1.84
SLC6A4-204ENST00000578609 LCE3EQ5T5B0 92 aa3.47□□□□□ -1.85
SLC6A4-204ENST00000578609 A0A0A0MQY5 61 aa3.38□□□□□ -1.87
SLC6A4-204ENST00000578609 NDUFAF8A1L188 74 aa3.26□□□□□ -1.89
SLC6A4-204ENST00000578609 LCE1FQ5T754 118 aa3.07□□□□□ -1.92
SLC6A4-204ENST00000578609 KRTAP21-2Q3LI59 83 aa3.04□□□□□ -1.92
SLC6A4-204ENST00000578609 PHGR1C9JFL3 82 aa2.77□□□□□ -1.97
SLC6A4-204ENST00000578609 PRM1P04553 51 aa2.73□□□□□ -1.97
SLC6A4-204ENST00000578609 INE1O15225 51 aa2.67□□□□□ -1.98
SLC6A4-204ENST00000578609 MUC19Q7Z5P9 8384 aa2.48□□□□□ -2.01
SLC6A4-204ENST00000578609 KRTAP21-1Q3LI58 79 aa1.98□□□□□ -2.09
SLC6A4-204ENST00000578609 MUC16Q8WXI7 14507 aa1.82□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 67.1 ms