RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 KRTAP25-1Q3LHN0 102 aa7.77□□□□□ -1.17
CDC42EP4-203ENST00000578516 MT1LQ93083 61 aa7.77□□□□□ -1.17
CDC42EP4-203ENST00000578516 CDC42SE1Q9NRR8 79 aa7.74□□□□□ -1.17
CDC42EP4-203ENST00000578516 KRTAP2-2Q9BYT5 123 aa7.73□□□□□ -1.17
CDC42EP4-203ENST00000578516 KRTAP2-1Q9BYU5 128 aa7.73□□□□□ -1.17
CDC42EP4-203ENST00000578516 MT1GP13640 62 aa7.68□□□□□ -1.18
CDC42EP4-203ENST00000578516 KRTAP12-3P60328 96 aa7.68□□□□□ -1.18
CDC42EP4-203ENST00000578516 MT1MQ8N339 61 aa7.66□□□□□ -1.18
CDC42EP4-203ENST00000578516 KRTAP4-3Q9BYR4 195 aa7.59□□□□□ -1.19
CDC42EP4-203ENST00000578516 ROMO1P60602 79 aa7.57□□□□□ -1.2
CDC42EP4-203ENST00000578516 PP632Q6XCG6 107 aa7.57□□□□□ -1.2
CDC42EP4-203ENST00000578516 DSTQ03001 7570 aaKnown RBP7.55□□□□□ -1.2
CDC42EP4-203ENST00000578516 KRTAP4-7Q9BYR0 210 aa7.52□□□□□ -1.21
CDC42EP4-203ENST00000578516 KRTAP23-1A1A580 65 aa7.41□□□□□ -1.22
CDC42EP4-203ENST00000578516 BRK1Q8WUW1 75 aa7.33□□□□□ -1.24
CDC42EP4-203ENST00000578516 KRTAP15-1Q3LI76 137 aa7.27□□□□□ -1.25
CDC42EP4-203ENST00000578516 KRTAP4-9Q9BYQ8 210 aa7.24□□□□□ -1.25
CDC42EP4-203ENST00000578516 LOC100996750A0A140TA64 210 aa7.1□□□□□ -1.27
CDC42EP4-203ENST00000578516 LCE3CQ5T5A8 94 aa7.1□□□□□ -1.27
CDC42EP4-203ENST00000578516 LCE1DQ5T752 114 aa7.08□□□□□ -1.28
CDC42EP4-203ENST00000578516 MT4P47944 62 aa7.07□□□□□ -1.28
CDC42EP4-203ENST00000578516 LCE4AQ5TA78 99 aa7.06□□□□□ -1.28
CDC42EP4-203ENST00000578516 KRTAP5-4Q6L8H1 288 aa7.05□□□□□ -1.28
CDC42EP4-203ENST00000578516 KRTAP19-4Q3LI73 84 aa7.01□□□□□ -1.29
CDC42EP4-203ENST00000578516 KRTAP5-5Q701N2 237 aaPredicted RBP6.97□□□□□ -1.29
CDC42EP4-203ENST00000578516 KRTAP4-6Q9BYQ5 205 aa6.91□□□□□ -1.3
CDC42EP4-203ENST00000578516 PMAIP1Q13794 54 aa6.84□□□□□ -1.31
CDC42EP4-203ENST00000578516 HMCN1Q96RW7 5635 aa6.82□□□□□ -1.32
CDC42EP4-203ENST00000578516 KRTAP9-6A8MVA2 160 aa6.82□□□□□ -1.32
CDC42EP4-203ENST00000578516 SYNE1Q8NF91 8797 aaKnown RBP6.71□□□□□ -1.33
CDC42EP4-203ENST00000578516 PRAC1Q96KF2 57 aa6.7□□□□□ -1.34
CDC42EP4-203ENST00000578516 KRTAP20-2Q3LI61 65 aa6.66□□□□□ -1.34
CDC42EP4-203ENST00000578516 GPR98Q8WXG9 6306 aa6.61□□□□□ -1.35
CDC42EP4-203ENST00000578516 KRTAP12-4P60329 112 aa6.6□□□□□ -1.35
CDC42EP4-203ENST00000578516 MT1AP04731 61 aa6.59□□□□□ -1.35
CDC42EP4-203ENST00000578516 KRTAP6-1Q3LI64 71 aa6.59□□□□□ -1.35
CDC42EP4-203ENST00000578516 PRO0628Q9UI54 55 aa6.59□□□□□ -1.35
CDC42EP4-203ENST00000578516 SPRR5A0A1B0GTR4 108 aa6.57□□□□□ -1.36
CDC42EP4-203ENST00000578516 AHNAK2Q8IVF2 5795 aa6.54□□□□□ -1.36
CDC42EP4-203ENST00000578516 SVIPQ8NHG7 77 aa6.48□□□□□ -1.37
CDC42EP4-203ENST00000578516 KRTAP5-3Q6L8H2 238 aa6.45□□□□□ -1.38
CDC42EP4-203ENST00000578516 KRTAP5-10Q6L8G5 202 aa6.36□□□□□ -1.39
CDC42EP4-203ENST00000578516 KRTAP9-4Q9BYQ2 154 aa6.31□□□□□ -1.4
CDC42EP4-203ENST00000578516 KRTAP5-2Q701N4 177 aa6.26□□□□□ -1.41
CDC42EP4-203ENST00000578516 KTN1-AS1Q86SY8 53 aa6.26□□□□□ -1.41
CDC42EP4-203ENST00000578516 KRTAP6-2Q3LI66 62 aa6.21□□□□□ -1.42
CDC42EP4-203ENST00000578516 KRTAP5-7Q6L8G8 165 aa6.03□□□□□ -1.44
CDC42EP4-203ENST00000578516 KRTAP4-11Q9BYQ6 195 aa5.96□□□□□ -1.46
CDC42EP4-203ENST00000578516 MT3P25713 68 aa5.95□□□□□ -1.46
CDC42EP4-203ENST00000578516 KRTAP5-8O75690 187 aa5.79□□□□□ -1.48
CDC42EP4-203ENST00000578516 OBSCNQ5VST9 7968 aa5.77□□□□□ -1.49
CDC42EP4-203ENST00000578516 KRTAP5-1Q6L8H4 278 aa5.55□□□□□ -1.52
CDC42EP4-203ENST00000578516 LUZP6Q538Z0 58 aa5.36□□□□□ -1.55
CDC42EP4-203ENST00000578516 KRTAP9-9Q9BYP9 154 aa5.35□□□□□ -1.55
CDC42EP4-203ENST00000578516 MUC5ACP98088 5654 aa5.34□□□□□ -1.55
CDC42EP4-203ENST00000578516 LCE1EQ5T753 118 aa5.33□□□□□ -1.56
CDC42EP4-203ENST00000578516 MUC5BQ9HC84 5762 aaPredicted RBP5.2□□□□□ -1.58
CDC42EP4-203ENST00000578516 AHNAKQ09666 5890 aaKnown RBP5.19□□□□□ -1.58
CDC42EP4-203ENST00000578516 LCE3DQ9BYE3 92 aa5.15□□□□□ -1.59
CDC42EP4-203ENST00000578516 LCE1BQ5T7P3 118 aa5.14□□□□□ -1.59
CDC42EP4-203ENST00000578516 KRTAP4-2Q9BYR5 136 aa5.14□□□□□ -1.59
CDC42EP4-203ENST00000578516 LCE1CQ5T751 118 aa4.97□□□□□ -1.61
CDC42EP4-203ENST00000578516 LCE3EQ5T5B0 92 aa4.91□□□□□ -1.62
CDC42EP4-203ENST00000578516 NDUFAF8A1L188 74 aa4.74□□□□□ -1.65
CDC42EP4-203ENST00000578516 KRTAP4-12Q9BQ66 201 aa4.6□□□□□ -1.67
CDC42EP4-203ENST00000578516 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.57□□□□□ -1.68
CDC42EP4-203ENST00000578516 KRTAP5-11Q6L8G4 156 aa4.5□□□□□ -1.69
CDC42EP4-203ENST00000578516 H3BS24 57 aa4.49□□□□□ -1.69
CDC42EP4-203ENST00000578516 A0A0A0MQY5 61 aa4.38□□□□□ -1.71
CDC42EP4-203ENST00000578516 KRTAP21-2Q3LI59 83 aa4.31□□□□□ -1.72
CDC42EP4-203ENST00000578516 LCE1FQ5T754 118 aa4.21□□□□□ -1.74
CDC42EP4-203ENST00000578516 KRTAP4-4Q9BYR3 166 aa4□□□□□ -1.77
CDC42EP4-203ENST00000578516 PRM1P04553 51 aa3.96□□□□□ -1.78
CDC42EP4-203ENST00000578516 PHGR1C9JFL3 82 aa3.89□□□□□ -1.79
CDC42EP4-203ENST00000578516 INE1O15225 51 aa3.71□□□□□ -1.82
CDC42EP4-203ENST00000578516 MUC19Q7Z5P9 8384 aa3.57□□□□□ -1.84
CDC42EP4-203ENST00000578516 KRTAP21-1Q3LI58 79 aa2.72□□□□□ -1.97
CDC42EP4-203ENST00000578516 MUC16Q8WXI7 14507 aa2.54□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 39.6 ms