RNA–Protein interactions for RNA: ENST00000578315.1

UPF3AP2-202, Transcript of UPF3A pseudogene 2, humanhuman

TSL 5 BASIC

Gene UPF3AP2, Length 730 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-202ENST00000578315 SERP1Q9Y6X1 66 aa4.53□□□□□ -1.68
UPF3AP2-202ENST00000578315 SEC61GP60059 68 aa4.52□□□□□ -1.69
UPF3AP2-202ENST00000578315 J3QR89 54 aa4.51□□□□□ -1.69
UPF3AP2-202ENST00000578315 SPANXA2-OT1Q8N9U9 137 aa4.51□□□□□ -1.69
UPF3AP2-202ENST00000578315 A0A1B0GU33 70 aa4.49□□□□□ -1.69
UPF3AP2-202ENST00000578315 A0A1B0GV90 55 aa4.48□□□□□ -1.69
UPF3AP2-202ENST00000578315 KRTAP5-5Q701N2 237 aaPredicted RBP4.48□□□□□ -1.69
UPF3AP2-202ENST00000578315 COA5Q86WW8 74 aa4.47□□□□□ -1.69
UPF3AP2-202ENST00000578315 TNP1P09430 55 aa4.46□□□□□ -1.7
UPF3AP2-202ENST00000578315 KRTAP12-4P60329 112 aa4.46□□□□□ -1.7
UPF3AP2-202ENST00000578315 SYNE1Q8NF91 8797 aaKnown RBP4.41□□□□□ -1.7
UPF3AP2-202ENST00000578315 KRTAP12-3P60328 96 aa4.4□□□□□ -1.71
UPF3AP2-202ENST00000578315 A8MU10 97 aa4.39□□□□□ -1.71
UPF3AP2-202ENST00000578315 SMIM26A0A096LP01 95 aa4.35□□□□□ -1.71
UPF3AP2-202ENST00000578315 SERP2Q8N6R1 65 aa4.27□□□□□ -1.73
UPF3AP2-202ENST00000578315 A0A1B0GU69 56 aa4.24□□□□□ -1.73
UPF3AP2-202ENST00000578315 MUC5ACP98088 5654 aa4.19□□□□□ -1.74
UPF3AP2-202ENST00000578315 KRTAP5-8O75690 187 aa4.18□□□□□ -1.74
UPF3AP2-202ENST00000578315 AHNAKQ09666 5890 aaKnown RBP4.17□□□□□ -1.74
UPF3AP2-202ENST00000578315 K7ERU9 68 aa4.16□□□□□ -1.74
UPF3AP2-202ENST00000578315 KRTAP5-2Q701N4 177 aa4.16□□□□□ -1.74
UPF3AP2-202ENST00000578315 MUC5BQ9HC84 5762 aaPredicted RBP4.14□□□□□ -1.75
UPF3AP2-202ENST00000578315 KRTAP6-1Q3LI64 71 aa4.1□□□□□ -1.75
UPF3AP2-202ENST00000578315 H7BZZ5 65 aa4.07□□□□□ -1.76
UPF3AP2-202ENST00000578315 MT1AP04731 61 aa4.05□□□□□ -1.76
UPF3AP2-202ENST00000578315 OBSCNQ5VST9 7968 aa4.03□□□□□ -1.76
UPF3AP2-202ENST00000578315 COX7CP15954 63 aa4.02□□□□□ -1.77
UPF3AP2-202ENST00000578315 PCP4P48539 62 aa4.02□□□□□ -1.77
UPF3AP2-202ENST00000578315 LCE3CQ5T5A8 94 aa4.01□□□□□ -1.77
UPF3AP2-202ENST00000578315 KRTAP25-1Q3LHN0 102 aa4□□□□□ -1.77
UPF3AP2-202ENST00000578315 KRTAP6-2Q3LI66 62 aa3.99□□□□□ -1.77
UPF3AP2-202ENST00000578315 KRTAP15-1Q3LI76 137 aa3.97□□□□□ -1.77
UPF3AP2-202ENST00000578315 PRR15LQ9BU68 103 aa3.97□□□□□ -1.77
UPF3AP2-202ENST00000578315 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.89□□□□□ -1.79
UPF3AP2-202ENST00000578315 LINC01558Q9Y6Z2 57 aa3.84□□□□□ -1.79
UPF3AP2-202ENST00000578315 KRTAP9-6A8MVA2 160 aa3.83□□□□□ -1.8
UPF3AP2-202ENST00000578315 UQCR11O14957 56 aa3.83□□□□□ -1.8
UPF3AP2-202ENST00000578315 KRTAP5-1Q6L8H4 278 aa3.82□□□□□ -1.8
UPF3AP2-202ENST00000578315 ANAPC13Q9BS18 74 aa3.79□□□□□ -1.8
UPF3AP2-202ENST00000578315 KRTAP23-1A1A580 65 aa3.77□□□□□ -1.81
UPF3AP2-202ENST00000578315 MT3P25713 68 aa3.73□□□□□ -1.81
UPF3AP2-202ENST00000578315 MIR22HGQ0VDD5 57 aa3.73□□□□□ -1.81
UPF3AP2-202ENST00000578315 K7ERS5 55 aa3.71□□□□□ -1.82
UPF3AP2-202ENST00000578315 KRTAP5-11Q6L8G4 156 aa3.71□□□□□ -1.82
UPF3AP2-202ENST00000578315 CCDC179H3BU77 68 aa3.7□□□□□ -1.82
UPF3AP2-202ENST00000578315 ATP5EP56381 51 aaPredicted RBP3.65□□□□□ -1.83
UPF3AP2-202ENST00000578315 TMEM258P61165 79 aa3.56□□□□□ -1.84
UPF3AP2-202ENST00000578315 RPS28P62857 69 aaKnown RBP3.56□□□□□ -1.84
UPF3AP2-202ENST00000578315 LCE1EQ5T753 118 aa3.48□□□□□ -1.85
UPF3AP2-202ENST00000578315 PSPHP1O15172 72 aa3.47□□□□□ -1.85
UPF3AP2-202ENST00000578315 CDC42SE1Q9NRR8 79 aa3.47□□□□□ -1.85
UPF3AP2-202ENST00000578315 Q1T7F1 81 aa3.45□□□□□ -1.86
UPF3AP2-202ENST00000578315 ROMO1P60602 79 aa3.4□□□□□ -1.87
UPF3AP2-202ENST00000578315 LCE1BQ5T7P3 118 aa3.4□□□□□ -1.87
UPF3AP2-202ENST00000578315 SVIPQ8NHG7 77 aa3.39□□□□□ -1.87
UPF3AP2-202ENST00000578315 V9GYY9 64 aa3.31□□□□□ -1.88
UPF3AP2-202ENST00000578315 A6NED7 52 aa3.3□□□□□ -1.88
UPF3AP2-202ENST00000578315 LCE1CQ5T751 118 aa3.24□□□□□ -1.89
UPF3AP2-202ENST00000578315 KRTAP4-4Q9BYR3 166 aa3.24□□□□□ -1.89
UPF3AP2-202ENST00000578315 PRO0628Q9UI54 55 aa3.24□□□□□ -1.89
UPF3AP2-202ENST00000578315 BRK1Q8WUW1 75 aa3.22□□□□□ -1.89
UPF3AP2-202ENST00000578315 PMAIP1Q13794 54 aa3.06□□□□□ -1.92
UPF3AP2-202ENST00000578315 A0A0A0MQY5 61 aa3.01□□□□□ -1.93
UPF3AP2-202ENST00000578315 KTN1-AS1Q86SY8 53 aa2.97□□□□□ -1.93
UPF3AP2-202ENST00000578315 LCE1FQ5T754 118 aa2.96□□□□□ -1.94
UPF3AP2-202ENST00000578315 PHGR1C9JFL3 82 aa2.93□□□□□ -1.94
UPF3AP2-202ENST00000578315 PRAC1Q96KF2 57 aa2.81□□□□□ -1.96
UPF3AP2-202ENST00000578315 LCE3DQ9BYE3 92 aa2.81□□□□□ -1.96
UPF3AP2-202ENST00000578315 KRTAP21-2Q3LI59 83 aa2.69□□□□□ -1.98
UPF3AP2-202ENST00000578315 LCE3EQ5T5B0 92 aa2.57□□□□□ -2
UPF3AP2-202ENST00000578315 MUC19Q7Z5P9 8384 aa2.53□□□□□ -2
UPF3AP2-202ENST00000578315 NDUFAF8A1L188 74 aa2.37□□□□□ -2.03
UPF3AP2-202ENST00000578315 LUZP6Q538Z0 58 aa2.31□□□□□ -2.04
UPF3AP2-202ENST00000578315 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
UPF3AP2-202ENST00000578315 INE1O15225 51 aa1.97□□□□□ -2.09
UPF3AP2-202ENST00000578315 MUC16Q8WXI7 14507 aa1.81□□□□□ -2.12
UPF3AP2-202ENST00000578315 PRM1P04553 51 aa1.74□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 45.1 ms