RNA–Protein interactions for RNA: ENST00000577605.1

CASC3-205, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-205ENST00000577605 SYNE2Q8WXH0 6885 aaKnown RBP3.04□□□□□ -1.92
CASC3-205ENST00000577605 PLAC4Q8WY50 150 aa3.04□□□□□ -1.92
CASC3-205ENST00000577605 MACF1Q9UPN3 7388 aaKnown RBP3.03□□□□□ -1.92
CASC3-205ENST00000577605 LCE3CQ5T5A8 94 aa3.03□□□□□ -1.92
CASC3-205ENST00000577605 SPATA8Q6RVD6 105 aa3.03□□□□□ -1.92
CASC3-205ENST00000577605 COA5Q86WW8 74 aa3.03□□□□□ -1.92
CASC3-205ENST00000577605 M0QZ58 72 aa3.02□□□□□ -1.93
CASC3-205ENST00000577605 P0C880 135 aa3.01□□□□□ -1.93
CASC3-205ENST00000577605 KRTAP5-1Q6L8H4 278 aa3.01□□□□□ -1.93
CASC3-205ENST00000577605 UQCR11O14957 56 aa2.98□□□□□ -1.93
CASC3-205ENST00000577605 NEBP20929 6669 aa2.95□□□□□ -1.94
CASC3-205ENST00000577605 KRTAP5-9P26371 169 aa2.93□□□□□ -1.94
CASC3-205ENST00000577605 MT1XP80297 61 aa2.93□□□□□ -1.94
CASC3-205ENST00000577605 KRTAP12-2P59991 146 aa2.92□□□□□ -1.94
CASC3-205ENST00000577605 KRTAP4-4Q9BYR3 166 aa2.87□□□□□ -1.95
CASC3-205ENST00000577605 MUC12Q9UKN1 5478 aa2.86□□□□□ -1.95
CASC3-205ENST00000577605 A0A1B0GU69 56 aa2.86□□□□□ -1.95
CASC3-205ENST00000577605 KRTAP5-4Q6L8H1 288 aa2.86□□□□□ -1.95
CASC3-205ENST00000577605 KRTAP8-1Q8IUC2 63 aa2.85□□□□□ -1.95
CASC3-205ENST00000577605 KRTAP20-1Q3LI63 56 aa2.82□□□□□ -1.96
CASC3-205ENST00000577605 SPRR2FQ96RM1 72 aa2.82□□□□□ -1.96
CASC3-205ENST00000577605 KRTAP13-4Q3LI77 160 aa2.81□□□□□ -1.96
CASC3-205ENST00000577605 GPR98Q8WXG9 6306 aa2.8□□□□□ -1.96
CASC3-205ENST00000577605 SPRR2EP22531 72 aa2.78□□□□□ -1.96
CASC3-205ENST00000577605 SPRR2BP35325 72 aa2.78□□□□□ -1.96
CASC3-205ENST00000577605 SPRR2AP35326 72 aa2.78□□□□□ -1.96
CASC3-205ENST00000577605 LCE3EQ5T5B0 92 aa2.77□□□□□ -1.97
CASC3-205ENST00000577605 KRTAP2-3P0C7H8 128 aa2.76□□□□□ -1.97
CASC3-205ENST00000577605 KRTAP2-4Q9BYR9 128 aa2.76□□□□□ -1.97
CASC3-205ENST00000577605 A0A0D9SG42 100 aa2.75□□□□□ -1.97
CASC3-205ENST00000577605 KMT2DO14686 5537 aa2.74□□□□□ -1.97
CASC3-205ENST00000577605 KRTAP12-1P59990 96 aa2.72□□□□□ -1.97
CASC3-205ENST00000577605 OBSCNQ5VST9 7968 aa2.71□□□□□ -1.98
CASC3-205ENST00000577605 SPRR5A0A1B0GTR4 108 aa2.7□□□□□ -1.98
CASC3-205ENST00000577605 SPRR2DP22532 72 aa2.69□□□□□ -1.98
CASC3-205ENST00000577605 MDN1Q9NU22 5596 aa2.69□□□□□ -1.98
CASC3-205ENST00000577605 KRTAP2-1Q9BYU5 128 aa2.68□□□□□ -1.98
CASC3-205ENST00000577605 TNP1P09430 55 aa2.64□□□□□ -1.99
CASC3-205ENST00000577605 KRTAP19-7Q3SYF9 63 aa2.62□□□□□ -1.99
CASC3-205ENST00000577605 LCE3AQ5TA76 89 aa2.62□□□□□ -1.99
CASC3-205ENST00000577605 MT1EP04732 61 aa2.6□□□□□ -1.99
CASC3-205ENST00000577605 KRTAP19-3Q7Z4W3 81 aa2.6□□□□□ -1.99
CASC3-205ENST00000577605 PP632Q6XCG6 107 aa2.58□□□□□ -2
CASC3-205ENST00000577605 KRTAP4-3Q9BYR4 195 aa2.58□□□□□ -2
CASC3-205ENST00000577605 C10orf95Q9H7T3 257 aa2.58□□□□□ -2
CASC3-205ENST00000577605 MT1GP13640 62 aa2.57□□□□□ -2
CASC3-205ENST00000577605 KRTAP19-5Q3LI72 72 aa2.57□□□□□ -2
CASC3-205ENST00000577605 INE1O15225 51 aa2.53□□□□□ -2
CASC3-205ENST00000577605 MT1LQ93083 61 aa2.5□□□□□ -2.01
CASC3-205ENST00000577605 KRTAP12-3P60328 96 aa2.47□□□□□ -2.01
CASC3-205ENST00000577605 MT1MQ8N339 61 aa2.47□□□□□ -2.01
CASC3-205ENST00000577605 KRTAP5-5Q701N2 237 aaPredicted RBP2.4□□□□□ -2.03
CASC3-205ENST00000577605 DSTQ03001 7570 aaKnown RBP2.39□□□□□ -2.03
CASC3-205ENST00000577605 AHNAK2Q8IVF2 5795 aa2.36□□□□□ -2.03
CASC3-205ENST00000577605 KRTAP5-2Q701N4 177 aa2.34□□□□□ -2.03
CASC3-205ENST00000577605 MT4P47944 62 aa2.31□□□□□ -2.04
CASC3-205ENST00000577605 LCE3DQ9BYE3 92 aa2.31□□□□□ -2.04
CASC3-205ENST00000577605 HMCN1Q96RW7 5635 aa2.26□□□□□ -2.05
CASC3-205ENST00000577605 KRTAP12-4P60329 112 aa2.26□□□□□ -2.05
CASC3-205ENST00000577605 LCE1CQ5T751 118 aa2.26□□□□□ -2.05
CASC3-205ENST00000577605 LCE1BQ5T7P3 118 aa2.26□□□□□ -2.05
CASC3-205ENST00000577605 KRTAP5-10Q6L8G5 202 aa2.26□□□□□ -2.05
CASC3-205ENST00000577605 KRTAP5-7Q6L8G8 165 aa2.25□□□□□ -2.05
CASC3-205ENST00000577605 KRTAP20-2Q3LI61 65 aa2.2□□□□□ -2.06
CASC3-205ENST00000577605 MT1AP04731 61 aa2.15□□□□□ -2.07
CASC3-205ENST00000577605 AHNAKQ09666 5890 aaKnown RBP2.12□□□□□ -2.07
CASC3-205ENST00000577605 KRTAP6-1Q3LI64 71 aa2.08□□□□□ -2.08
CASC3-205ENST00000577605 MUC5BQ9HC84 5762 aaPredicted RBP2.02□□□□□ -2.09
CASC3-205ENST00000577605 SYNE1Q8NF91 8797 aaKnown RBP2.01□□□□□ -2.09
CASC3-205ENST00000577605 KRTAP6-2Q3LI66 62 aa2□□□□□ -2.09
CASC3-205ENST00000577605 MUC5ACP98088 5654 aa1.98□□□□□ -2.09
CASC3-205ENST00000577605 KRTAP5-8O75690 187 aa1.93□□□□□ -2.1
CASC3-205ENST00000577605 MUC19Q7Z5P9 8384 aa1.85□□□□□ -2.11
CASC3-205ENST00000577605 KRTAP21-2Q3LI59 83 aa1.63□□□□□ -2.15
CASC3-205ENST00000577605 PRM1P04553 51 aa1.42□□□□□ -2.18
CASC3-205ENST00000577605 PHGR1C9JFL3 82 aa1.32□□□□□ -2.2
CASC3-205ENST00000577605 KRTAP21-1Q3LI58 79 aa1.03□□□□□ -2.24
CASC3-205ENST00000577605 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 9.5 ms