RNA–Protein interactions for RNA: ENST00000577483.1

SSH2-205, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,630 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-205ENST00000577483 SEC61GP60059 68 aa4.81□□□□□ -1.64
SSH2-205ENST00000577483 KRTAP19-7Q3SYF9 63 aa4.79□□□□□ -1.64
SSH2-205ENST00000577483 PRR15LQ9BU68 103 aa4.79□□□□□ -1.64
SSH2-205ENST00000577483 A0A1B0GU69 56 aa4.78□□□□□ -1.64
SSH2-205ENST00000577483 KRTAP4-11Q9BYQ6 195 aa4.78□□□□□ -1.64
SSH2-205ENST00000577483 A0A1B0GU33 70 aa4.77□□□□□ -1.65
SSH2-205ENST00000577483 PSPHP1O15172 72 aa4.76□□□□□ -1.65
SSH2-205ENST00000577483 KRTAP12-1P59990 96 aa4.75□□□□□ -1.65
SSH2-205ENST00000577483 SPINT4Q6UDR6 99 aa4.75□□□□□ -1.65
SSH2-205ENST00000577483 MT1EP04732 61 aa4.73□□□□□ -1.65
SSH2-205ENST00000577483 DSTQ03001 7570 aaKnown RBP4.73□□□□□ -1.65
SSH2-205ENST00000577483 KRTAP19-3Q7Z4W3 81 aa4.69□□□□□ -1.66
SSH2-205ENST00000577483 A8MU10 97 aa4.64□□□□□ -1.67
SSH2-205ENST00000577483 KRTAP19-5Q3LI72 72 aa4.64□□□□□ -1.67
SSH2-205ENST00000577483 A6NED7 52 aa4.61□□□□□ -1.67
SSH2-205ENST00000577483 UQCR11O14957 56 aa4.61□□□□□ -1.67
SSH2-205ENST00000577483 MT1GP13640 62 aa4.56□□□□□ -1.68
SSH2-205ENST00000577483 MIR22HGQ0VDD5 57 aa4.56□□□□□ -1.68
SSH2-205ENST00000577483 C10orf95Q9H7T3 257 aa4.55□□□□□ -1.68
SSH2-205ENST00000577483 CDC42SE1Q9NRR8 79 aa4.54□□□□□ -1.68
SSH2-205ENST00000577483 LCE3AQ5TA76 89 aa4.52□□□□□ -1.69
SSH2-205ENST00000577483 BRK1Q8WUW1 75 aa4.52□□□□□ -1.69
SSH2-205ENST00000577483 MT1MQ8N339 61 aa4.51□□□□□ -1.69
SSH2-205ENST00000577483 MT1LQ93083 61 aa4.51□□□□□ -1.69
SSH2-205ENST00000577483 PP632Q6XCG6 107 aa4.5□□□□□ -1.69
SSH2-205ENST00000577483 TNP1P09430 55 aa4.49□□□□□ -1.69
SSH2-205ENST00000577483 KRTAP4-3Q9BYR4 195 aa4.43□□□□□ -1.7
SSH2-205ENST00000577483 PRO0628Q9UI54 55 aa4.38□□□□□ -1.71
SSH2-205ENST00000577483 K7ERS5 55 aa4.35□□□□□ -1.71
SSH2-205ENST00000577483 MT4P47944 62 aa4.35□□□□□ -1.71
SSH2-205ENST00000577483 GPR98Q8WXG9 6306 aa4.34□□□□□ -1.71
SSH2-205ENST00000577483 KRTAP12-3P60328 96 aa4.33□□□□□ -1.72
SSH2-205ENST00000577483 KRTAP5-4Q6L8H1 288 aa4.32□□□□□ -1.72
SSH2-205ENST00000577483 HMCN1Q96RW7 5635 aa4.29□□□□□ -1.72
SSH2-205ENST00000577483 PMAIP1Q13794 54 aa4.25□□□□□ -1.73
SSH2-205ENST00000577483 PRAC1Q96KF2 57 aa4.24□□□□□ -1.73
SSH2-205ENST00000577483 KRTAP25-1Q3LHN0 102 aa4.21□□□□□ -1.73
SSH2-205ENST00000577483 ROMO1P60602 79 aa4.17□□□□□ -1.74
SSH2-205ENST00000577483 KRTAP5-5Q701N2 237 aaPredicted RBP4.16□□□□□ -1.74
SSH2-205ENST00000577483 AHNAK2Q8IVF2 5795 aa4.12□□□□□ -1.75
SSH2-205ENST00000577483 KRTAP5-10Q6L8G5 202 aa4.11□□□□□ -1.75
SSH2-205ENST00000577483 KRTAP20-2Q3LI61 65 aa4.08□□□□□ -1.76
SSH2-205ENST00000577483 KTN1-AS1Q86SY8 53 aa4.07□□□□□ -1.76
SSH2-205ENST00000577483 SYNE1Q8NF91 8797 aaKnown RBP4.03□□□□□ -1.76
SSH2-205ENST00000577483 SPRR5A0A1B0GTR4 108 aa4.03□□□□□ -1.77
SSH2-205ENST00000577483 MT3P25713 68 aa3.99□□□□□ -1.77
SSH2-205ENST00000577483 KRTAP12-4P60329 112 aa3.99□□□□□ -1.77
SSH2-205ENST00000577483 LCE3CQ5T5A8 94 aa3.99□□□□□ -1.77
SSH2-205ENST00000577483 NDUFAF8A1L188 74 aa3.95□□□□□ -1.78
SSH2-205ENST00000577483 KRTAP5-7Q6L8G8 165 aa3.94□□□□□ -1.78
SSH2-205ENST00000577483 MT1AP04731 61 aa3.84□□□□□ -1.8
SSH2-205ENST00000577483 KRTAP6-1Q3LI64 71 aa3.84□□□□□ -1.8
SSH2-205ENST00000577483 KRTAP9-6A8MVA2 160 aa3.81□□□□□ -1.8
SSH2-205ENST00000577483 KRTAP5-2Q701N4 177 aa3.78□□□□□ -1.8
SSH2-205ENST00000577483 LCE1FQ5T754 118 aa3.7□□□□□ -1.82
SSH2-205ENST00000577483 KRTAP6-2Q3LI66 62 aa3.66□□□□□ -1.82
SSH2-205ENST00000577483 OBSCNQ5VST9 7968 aa3.63□□□□□ -1.83
SSH2-205ENST00000577483 KRTAP5-8O75690 187 aa3.62□□□□□ -1.83
SSH2-205ENST00000577483 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.45□□□□□ -1.86
SSH2-205ENST00000577483 KRTAP5-1Q6L8H4 278 aa3.41□□□□□ -1.86
SSH2-205ENST00000577483 MUC5ACP98088 5654 aa3.38□□□□□ -1.87
SSH2-205ENST00000577483 MUC5BQ9HC84 5762 aaPredicted RBP3.37□□□□□ -1.87
SSH2-205ENST00000577483 LCE1EQ5T753 118 aa3.37□□□□□ -1.87
SSH2-205ENST00000577483 AHNAKQ09666 5890 aaKnown RBP3.31□□□□□ -1.88
SSH2-205ENST00000577483 LUZP6Q538Z0 58 aa3.25□□□□□ -1.89
SSH2-205ENST00000577483 KRTAP5-11Q6L8G4 156 aa3.23□□□□□ -1.89
SSH2-205ENST00000577483 LCE3EQ5T5B0 92 aa3.18□□□□□ -1.9
SSH2-205ENST00000577483 LCE1BQ5T7P3 118 aa3.04□□□□□ -1.92
SSH2-205ENST00000577483 LCE1CQ5T751 118 aa2.99□□□□□ -1.93
SSH2-205ENST00000577483 KRTAP4-4Q9BYR3 166 aa2.88□□□□□ -1.95
SSH2-205ENST00000577483 LCE3DQ9BYE3 92 aa2.86□□□□□ -1.95
SSH2-205ENST00000577483 INE1O15225 51 aa2.58□□□□□ -2
SSH2-205ENST00000577483 KRTAP21-2Q3LI59 83 aa2.53□□□□□ -2
SSH2-205ENST00000577483 PHGR1C9JFL3 82 aa2.38□□□□□ -2.03
SSH2-205ENST00000577483 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
SSH2-205ENST00000577483 PRM1P04553 51 aa2.18□□□□□ -2.06
SSH2-205ENST00000577483 KRTAP21-1Q3LI58 79 aa1.79□□□□□ -2.12
SSH2-205ENST00000577483 MUC16Q8WXI7 14507 aa1.57□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 98.8 ms