RNA–Protein interactions for RNA: ENST00000576502.5

NDE1-211, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 2

Gene NDE1, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-211ENST00000576502 KRTAP19-3Q7Z4W3 81 aa5.12□□□□□ -1.59
NDE1-211ENST00000576502 A6NED7 52 aa5.1□□□□□ -1.59
NDE1-211ENST00000576502 MIR22HGQ0VDD5 57 aa5.1□□□□□ -1.59
NDE1-211ENST00000576502 LCE5AQ5TCM9 118 aa5.1□□□□□ -1.59
NDE1-211ENST00000576502 KRTAP19-5Q3LI72 72 aa5.06□□□□□ -1.6
NDE1-211ENST00000576502 PP632Q6XCG6 107 aa5.05□□□□□ -1.6
NDE1-211ENST00000576502 C10orf95Q9H7T3 257 aa5.05□□□□□ -1.6
NDE1-211ENST00000576502 K7ERS5 55 aa5.04□□□□□ -1.6
NDE1-211ENST00000576502 MT1GP13640 62 aa5.02□□□□□ -1.61
NDE1-211ENST00000576502 LCE3AQ5TA76 89 aa4.98□□□□□ -1.61
NDE1-211ENST00000576502 CDC42SE1Q9NRR8 79 aa4.96□□□□□ -1.62
NDE1-211ENST00000576502 MT1LQ93083 61 aa4.92□□□□□ -1.62
NDE1-211ENST00000576502 DSTQ03001 7570 aaKnown RBP4.9□□□□□ -1.63
NDE1-211ENST00000576502 MT1MQ8N339 61 aa4.89□□□□□ -1.63
NDE1-211ENST00000576502 KRTAP25-1Q3LHN0 102 aa4.85□□□□□ -1.63
NDE1-211ENST00000576502 BRK1Q8WUW1 75 aa4.84□□□□□ -1.63
NDE1-211ENST00000576502 KRTAP12-3P60328 96 aa4.83□□□□□ -1.64
NDE1-211ENST00000576502 KRTAP4-9Q9BYQ8 210 aa4.78□□□□□ -1.64
NDE1-211ENST00000576502 LCE4AQ5TA78 99 aa4.77□□□□□ -1.65
NDE1-211ENST00000576502 KRTAP4-12Q9BQ66 201 aa4.75□□□□□ -1.65
NDE1-211ENST00000576502 LCE1DQ5T752 114 aa4.7□□□□□ -1.66
NDE1-211ENST00000576502 KRTAP4-3Q9BYR4 195 aa4.7□□□□□ -1.66
NDE1-211ENST00000576502 ROMO1P60602 79 aa4.68□□□□□ -1.66
NDE1-211ENST00000576502 MT4P47944 62 aa4.67□□□□□ -1.66
NDE1-211ENST00000576502 KRTAP19-4Q3LI73 84 aa4.66□□□□□ -1.66
NDE1-211ENST00000576502 KRTAP9-9Q9BYP9 154 aa4.66□□□□□ -1.66
NDE1-211ENST00000576502 KRTAP9-4Q9BYQ2 154 aa4.66□□□□□ -1.66
NDE1-211ENST00000576502 KRTAP5-4Q6L8H1 288 aa4.63□□□□□ -1.67
NDE1-211ENST00000576502 PRAC1Q96KF2 57 aa4.63□□□□□ -1.67
NDE1-211ENST00000576502 PRO0628Q9UI54 55 aa4.63□□□□□ -1.67
NDE1-211ENST00000576502 KRTAP4-7Q9BYR0 210 aa4.61□□□□□ -1.67
NDE1-211ENST00000576502 GPR98Q8WXG9 6306 aa4.59□□□□□ -1.68
NDE1-211ENST00000576502 PMAIP1Q13794 54 aa4.58□□□□□ -1.68
NDE1-211ENST00000576502 HMCN1Q96RW7 5635 aa4.55□□□□□ -1.68
NDE1-211ENST00000576502 KRTAP15-1Q3LI76 137 aa4.53□□□□□ -1.68
NDE1-211ENST00000576502 KRTAP5-5Q701N2 237 aaPredicted RBP4.45□□□□□ -1.7
NDE1-211ENST00000576502 KRTAP12-4P60329 112 aa4.44□□□□□ -1.7
NDE1-211ENST00000576502 LCE3CQ5T5A8 94 aa4.44□□□□□ -1.7
NDE1-211ENST00000576502 SPRR5A0A1B0GTR4 108 aa4.4□□□□□ -1.71
NDE1-211ENST00000576502 AHNAK2Q8IVF2 5795 aa4.39□□□□□ -1.71
NDE1-211ENST00000576502 KRTAP20-2Q3LI61 65 aa4.37□□□□□ -1.71
NDE1-211ENST00000576502 KRTAP5-10Q6L8G5 202 aa4.33□□□□□ -1.72
NDE1-211ENST00000576502 KTN1-AS1Q86SY8 53 aa4.33□□□□□ -1.72
NDE1-211ENST00000576502 KRTAP4-2Q9BYR5 136 aa4.27□□□□□ -1.73
NDE1-211ENST00000576502 SYNE1Q8NF91 8797 aaKnown RBP4.27□□□□□ -1.73
NDE1-211ENST00000576502 KRTAP5-3Q6L8H2 238 aa4.26□□□□□ -1.73
NDE1-211ENST00000576502 MT1AP04731 61 aa4.21□□□□□ -1.74
NDE1-211ENST00000576502 KRTAP5-7Q6L8G8 165 aa4.19□□□□□ -1.74
NDE1-211ENST00000576502 KRTAP4-11Q9BYQ6 195 aa4.17□□□□□ -1.74
NDE1-211ENST00000576502 KRTAP6-1Q3LI64 71 aa4.14□□□□□ -1.75
NDE1-211ENST00000576502 KRTAP9-6A8MVA2 160 aa4.13□□□□□ -1.75
NDE1-211ENST00000576502 KRTAP5-2Q701N4 177 aa4.06□□□□□ -1.76
NDE1-211ENST00000576502 NDUFAF8A1L188 74 aa4.04□□□□□ -1.76
NDE1-211ENST00000576502 KRTAP6-2Q3LI66 62 aa3.96□□□□□ -1.78
NDE1-211ENST00000576502 MT3P25713 68 aa3.88□□□□□ -1.79
NDE1-211ENST00000576502 KRTAP5-8O75690 187 aa3.83□□□□□ -1.8
NDE1-211ENST00000576502 LUZP6Q538Z0 58 aa3.77□□□□□ -1.81
NDE1-211ENST00000576502 OBSCNQ5VST9 7968 aa3.69□□□□□ -1.82
NDE1-211ENST00000576502 KRTAP5-1Q6L8H4 278 aa3.62□□□□□ -1.83
NDE1-211ENST00000576502 AHNAKQ09666 5890 aaKnown RBP3.6□□□□□ -1.83
NDE1-211ENST00000576502 MUC5ACP98088 5654 aa3.59□□□□□ -1.84
NDE1-211ENST00000576502 MUC5BQ9HC84 5762 aaPredicted RBP3.59□□□□□ -1.84
NDE1-211ENST00000576502 LCE1EQ5T753 118 aa3.55□□□□□ -1.84
NDE1-211ENST00000576502 LCE1FQ5T754 118 aa3.41□□□□□ -1.86
NDE1-211ENST00000576502 LCE1BQ5T7P3 118 aa3.32□□□□□ -1.88
NDE1-211ENST00000576502 LCE1CQ5T751 118 aa3.28□□□□□ -1.88
NDE1-211ENST00000576502 LCE3DQ9BYE3 92 aa3.23□□□□□ -1.89
NDE1-211ENST00000576502 LCE3EQ5T5B0 92 aa3.06□□□□□ -1.92
NDE1-211ENST00000576502 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.98□□□□□ -1.93
NDE1-211ENST00000576502 KRTAP5-11Q6L8G4 156 aa2.97□□□□□ -1.93
NDE1-211ENST00000576502 INE1O15225 51 aa2.79□□□□□ -1.96
NDE1-211ENST00000576502 KRTAP21-2Q3LI59 83 aa2.72□□□□□ -1.97
NDE1-211ENST00000576502 PHGR1C9JFL3 82 aa2.55□□□□□ -2
NDE1-211ENST00000576502 KRTAP4-4Q9BYR3 166 aa2.47□□□□□ -2.01
NDE1-211ENST00000576502 PRM1P04553 51 aa2.4□□□□□ -2.03
NDE1-211ENST00000576502 MUC19Q7Z5P9 8384 aa2.31□□□□□ -2.04
NDE1-211ENST00000576502 KRTAP21-1Q3LI58 79 aa1.97□□□□□ -2.09
NDE1-211ENST00000576502 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 133.7 ms