RNA–Protein interactions for RNA: ENST00000575857.3

SLC12A4-215, Transcript of solute carrier family 12 member 4, human

TSL 3

Gene SLC12A4, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC12A4-215	ENST00000575857	MT1E	P04732	61 aa		4.03	□□□□□ -1.76
SLC12A4-215	ENST00000575857	KRTAP19-5	Q3LI72	72 aa		4.01	□□□□□ -1.77
SLC12A4-215	ENST00000575857	LCE3A	Q5TA76	89 aa		4.01	□□□□□ -1.77
SLC12A4-215	ENST00000575857	ROMO1	P60602	79 aa		3.98	□□□□□ -1.77
SLC12A4-215	ENST00000575857	PRO0628	Q9UI54	55 aa		3.96	□□□□□ -1.78
SLC12A4-215	ENST00000575857	DST	Q03001	7570 aa	Known RBP	3.95	□□□□□ -1.78
SLC12A4-215	ENST00000575857	KRTAP25-1	Q3LHN0	102 aa		3.95	□□□□□ -1.78
SLC12A4-215	ENST00000575857	KRTAP4-9	Q9BYQ8	210 aa		3.95	□□□□□ -1.78
SLC12A4-215	ENST00000575857	LCE5A	Q5TCM9	118 aa		3.94	□□□□□ -1.78
SLC12A4-215	ENST00000575857	KRTAP19-3	Q7Z4W3	81 aa		3.94	□□□□□ -1.78
SLC12A4-215	ENST00000575857	PMAIP1	Q13794	54 aa		3.91	□□□□□ -1.78
SLC12A4-215	ENST00000575857	MT1L	Q93083	61 aa		3.88	□□□□□ -1.79
SLC12A4-215	ENST00000575857	MT1G	P13640	62 aa		3.86	□□□□□ -1.79
SLC12A4-215	ENST00000575857	KRTAP12-3	P60328	96 aa		3.86	□□□□□ -1.79
SLC12A4-215	ENST00000575857	KRTAP23-1	A1A580	65 aa		3.84	□□□□□ -1.79
SLC12A4-215	ENST00000575857	MT1M	Q8N339	61 aa		3.82	□□□□□ -1.8
SLC12A4-215	ENST00000575857	LCE1D	Q5T752	114 aa		3.8	□□□□□ -1.8
SLC12A4-215	ENST00000575857	PP632	Q6XCG6	107 aa		3.79	□□□□□ -1.8
SLC12A4-215	ENST00000575857	HMCN1	Q96RW7	5635 aa		3.74	□□□□□ -1.81
SLC12A4-215	ENST00000575857	MT4	P47944	62 aa		3.73	□□□□□ -1.81
SLC12A4-215	ENST00000575857	KRTAP4-3	Q9BYR4	195 aa		3.72	□□□□□ -1.81
SLC12A4-215	ENST00000575857	AHNAK2	Q8IVF2	5795 aa		3.71	□□□□□ -1.81
SLC12A4-215	ENST00000575857	KTN1-AS1	Q86SY8	53 aa		3.7	□□□□□ -1.82
SLC12A4-215	ENST00000575857	KRTAP4-7	Q9BYR0	210 aa		3.7	□□□□□ -1.82
SLC12A4-215	ENST00000575857	PRAC1	Q96KF2	57 aa		3.69	□□□□□ -1.82
SLC12A4-215	ENST00000575857	KRTAP15-1	Q3LI76	137 aa		3.67	□□□□□ -1.82
SLC12A4-215	ENST00000575857	KRTAP19-4	Q3LI73	84 aa		3.65	□□□□□ -1.83
SLC12A4-215	ENST00000575857	LCE4A	Q5TA78	99 aa		3.64	□□□□□ -1.83
SLC12A4-215	ENST00000575857	KRTAP5-10	Q6L8G5	202 aa		3.64	□□□□□ -1.83
SLC12A4-215	ENST00000575857	KRTAP4-6	Q9BYQ5	205 aa		3.61	□□□□□ -1.83
SLC12A4-215	ENST00000575857	LCE3C	Q5T5A8	94 aa		3.57	□□□□□ -1.84
SLC12A4-215	ENST00000575857	KRTAP5-4	Q6L8H1	288 aa		3.57	□□□□□ -1.84
SLC12A4-215	ENST00000575857	KRTAP5-7	Q6L8G8	165 aa		3.51	□□□□□ -1.85
SLC12A4-215	ENST00000575857	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.5	□□□□□ -1.85
SLC12A4-215	ENST00000575857	LOC100996750	A0A140TA64	210 aa		3.49	□□□□□ -1.85
SLC12A4-215	ENST00000575857	KRTAP5-3	Q6L8H2	238 aa		3.49	□□□□□ -1.85
SLC12A4-215	ENST00000575857	SVIP	Q8NHG7	77 aa		3.48	□□□□□ -1.85
SLC12A4-215	ENST00000575857	KRTAP9-6	A8MVA2	160 aa		3.41	□□□□□ -1.86
SLC12A4-215	ENST00000575857	SPRR5	A0A1B0GTR4	108 aa		3.4	□□□□□ -1.87
SLC12A4-215	ENST00000575857	KRTAP20-2	Q3LI61	65 aa		3.4	□□□□□ -1.87
SLC12A4-215	ENST00000575857	SYNE1	Q8NF91	8797 aa	Known RBP	3.4	□□□□□ -1.87
SLC12A4-215	ENST00000575857	MT1A	P04731	61 aa		3.3	□□□□□ -1.88
SLC12A4-215	ENST00000575857	KRTAP12-4	P60329	112 aa		3.29	□□□□□ -1.88
SLC12A4-215	ENST00000575857	KRTAP6-1	Q3LI64	71 aa		3.27	□□□□□ -1.89
SLC12A4-215	ENST00000575857	KRTAP9-4	Q9BYQ2	154 aa		3.16	□□□□□ -1.9
SLC12A4-215	ENST00000575857	KRTAP4-11	Q9BYQ6	195 aa		3.16	□□□□□ -1.9
SLC12A4-215	ENST00000575857	KRTAP5-2	Q701N4	177 aa		3.14	□□□□□ -1.91
SLC12A4-215	ENST00000575857	AHNAK	Q09666	5890 aa	Known RBP	3.11	□□□□□ -1.91
SLC12A4-215	ENST00000575857	MUC5AC	P98088	5654 aa		3.1	□□□□□ -1.91
SLC12A4-215	ENST00000575857	KRTAP5-8	O75690	187 aa		3.08	□□□□□ -1.92
SLC12A4-215	ENST00000575857	KRTAP6-2	Q3LI66	62 aa		3.07	□□□□□ -1.92
SLC12A4-215	ENST00000575857	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.05	□□□□□ -1.92
SLC12A4-215	ENST00000575857	LUZP6	Q538Z0	58 aa		3.03	□□□□□ -1.92
SLC12A4-215	ENST00000575857	MT3	P25713	68 aa		2.99	□□□□□ -1.93
SLC12A4-215	ENST00000575857	OBSCN	Q5VST9	7968 aa		2.95	□□□□□ -1.94
SLC12A4-215	ENST00000575857	KRTAP9-9	Q9BYP9	154 aa		2.92	□□□□□ -1.94
SLC12A4-215	ENST00000575857	KRTAP5-1	Q6L8H4	278 aa		2.83	□□□□□ -1.96
SLC12A4-215	ENST00000575857	NDUFAF8	A1L188	74 aa		2.82	□□□□□ -1.96
SLC12A4-215	ENST00000575857	LCE1E	Q5T753	118 aa		2.72	□□□□□ -1.97
SLC12A4-215	ENST00000575857	LCE3D	Q9BYE3	92 aa		2.6	□□□□□ -1.99
SLC12A4-215	ENST00000575857	KRTAP4-2	Q9BYR5	136 aa		2.57	□□□□□ -2
SLC12A4-215	ENST00000575857	LCE1C	Q5T751	118 aa		2.52	□□□□□ -2.01
SLC12A4-215	ENST00000575857	LCE1B	Q5T7P3	118 aa		2.52	□□□□□ -2.01
SLC12A4-215	ENST00000575857	LCE3E	Q5T5B0	92 aa		2.48	□□□□□ -2.01
SLC12A4-215	ENST00000575857		A0A0A0MQY5	61 aa		2.42	□□□□□ -2.02
SLC12A4-215	ENST00000575857	KRTAP4-12	Q9BQ66	201 aa		2.41	□□□□□ -2.02
SLC12A4-215	ENST00000575857	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.34	□□□□□ -2.03
SLC12A4-215	ENST00000575857	INE1	O15225	51 aa		2.33	□□□□□ -2.04
SLC12A4-215	ENST00000575857	KRTAP5-11	Q6L8G4	156 aa		2.27	□□□□□ -2.05
SLC12A4-215	ENST00000575857	KRTAP21-2	Q3LI59	83 aa		2.17	□□□□□ -2.06
SLC12A4-215	ENST00000575857	LCE1F	Q5T754	118 aa		2.15	□□□□□ -2.07
SLC12A4-215	ENST00000575857	PHGR1	C9JFL3	82 aa		2.13	□□□□□ -2.07
SLC12A4-215	ENST00000575857		H3BS24	57 aa		2.11	□□□□□ -2.07
SLC12A4-215	ENST00000575857	PRM1	P04553	51 aa		2.06	□□□□□ -2.08
SLC12A4-215	ENST00000575857	KRTAP4-4	Q9BYR3	166 aa		1.93	□□□□□ -2.1
SLC12A4-215	ENST00000575857	MUC19	Q7Z5P9	8384 aa		1.83	□□□□□ -2.12
SLC12A4-215	ENST00000575857	KRTAP21-1	Q3LI58	79 aa		1.59	□□□□□ -2.15
SLC12A4-215	ENST00000575857	MUC16	Q8WXI7	14507 aa		1.29	□□□□□ -2.2

Retrieved 78 of 20,778 RNA–protein pairs in 49 ms