RNA–Protein interactions for RNA: ENST00000574728.1

PRPF8-211, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-211ENST00000574728 SPINT4Q6UDR6 99 aa2.07□□□□□ -2.08
PRPF8-211ENST00000574728 LINC00208Q96KT6 92 aa2.07□□□□□ -2.08
PRPF8-211ENST00000574728 H0YAA0 97 aa2.06□□□□□ -2.08
PRPF8-211ENST00000574728 ROMO1P60602 79 aa2.06□□□□□ -2.08
PRPF8-211ENST00000574728 TRAV7A0A075B6U4 112 aa2.05□□□□□ -2.08
PRPF8-211ENST00000574728 CDC42SE1Q9NRR8 79 aa2.05□□□□□ -2.08
PRPF8-211ENST00000574728 Q5VV11 94 aa2.04□□□□□ -2.08
PRPF8-211ENST00000574728 SPTSSBQ8NFR3 76 aa2.04□□□□□ -2.08
PRPF8-211ENST00000574728 DMAC1Q96GE9 116 aa2.04□□□□□ -2.08
PRPF8-211ENST00000574728 H3BPC8 53 aa2.03□□□□□ -2.08
PRPF8-211ENST00000574728 KRTAP6-3Q3LI67 103 aa2.03□□□□□ -2.08
PRPF8-211ENST00000574728 CRIPTQ9P021 101 aa2.03□□□□□ -2.08
PRPF8-211ENST00000574728 P0C880 135 aa2.02□□□□□ -2.09
PRPF8-211ENST00000574728 C20orf197Q8N268 126 aa2.01□□□□□ -2.09
PRPF8-211ENST00000574728 MT1XP80297 61 aa2□□□□□ -2.09
PRPF8-211ENST00000574728 CHKB-CPT1BH3BT56 60 aa1.99□□□□□ -2.09
PRPF8-211ENST00000574728 MIR22HGQ0VDD5 57 aa1.99□□□□□ -2.09
PRPF8-211ENST00000574728 SNURFQ9Y675 71 aa1.95□□□□□ -2.1
PRPF8-211ENST00000574728 A0A1B0GU33 70 aa1.93□□□□□ -2.1
PRPF8-211ENST00000574728 ACYP2P14621 99 aa1.93□□□□□ -2.1
PRPF8-211ENST00000574728 M0QZ58 72 aa1.92□□□□□ -2.1
PRPF8-211ENST00000574728 KRTAP13-4Q3LI77 160 aa1.92□□□□□ -2.1
PRPF8-211ENST00000574728 R4GN34 69 aa1.92□□□□□ -2.1
PRPF8-211ENST00000574728 PRR15LQ9BU68 103 aa1.9□□□□□ -2.11
PRPF8-211ENST00000574728 PLAC4Q8WY50 150 aa1.89□□□□□ -2.11
PRPF8-211ENST00000574728 PRO2289Q9P1D8 64 aa1.88□□□□□ -2.11
PRPF8-211ENST00000574728 KRTAP25-1Q3LHN0 102 aa1.87□□□□□ -2.11
PRPF8-211ENST00000574728 COA5Q86WW8 74 aa1.87□□□□□ -2.11
PRPF8-211ENST00000574728 SPRR2FQ96RM1 72 aa1.86□□□□□ -2.11
PRPF8-211ENST00000574728 LINC01558Q9Y6Z2 57 aa1.86□□□□□ -2.11
PRPF8-211ENST00000574728 KRTAP8-1Q8IUC2 63 aa1.85□□□□□ -2.11
PRPF8-211ENST00000574728 UQCR11O14957 56 aa1.83□□□□□ -2.12
PRPF8-211ENST00000574728 KRTAP20-1Q3LI63 56 aa1.83□□□□□ -2.12
PRPF8-211ENST00000574728 KRTAP5-8O75690 187 aa1.82□□□□□ -2.12
PRPF8-211ENST00000574728 SPRR2EP22531 72 aa1.81□□□□□ -2.12
PRPF8-211ENST00000574728 SPRR2BP35325 72 aa1.81□□□□□ -2.12
PRPF8-211ENST00000574728 SPRR2AP35326 72 aa1.81□□□□□ -2.12
PRPF8-211ENST00000574728 KRTAP2-3P0C7H8 128 aa1.8□□□□□ -2.12
PRPF8-211ENST00000574728 KRTAP12-1P59990 96 aa1.8□□□□□ -2.12
PRPF8-211ENST00000574728 KRTAP19-7Q3SYF9 63 aa1.8□□□□□ -2.12
PRPF8-211ENST00000574728 SPATA8Q6RVD6 105 aa1.8□□□□□ -2.12
PRPF8-211ENST00000574728 KRTAP2-4Q9BYR9 128 aa1.8□□□□□ -2.12
PRPF8-211ENST00000574728 KRTAP12-3P60328 96 aa1.78□□□□□ -2.12
PRPF8-211ENST00000574728 A0A0D9SG42 100 aa1.77□□□□□ -2.13
PRPF8-211ENST00000574728 MT1EP04732 61 aa1.77□□□□□ -2.13
PRPF8-211ENST00000574728 SPRR2DP22532 72 aa1.76□□□□□ -2.13
PRPF8-211ENST00000574728 DSTQ03001 7570 aaKnown RBP1.74□□□□□ -2.13
PRPF8-211ENST00000574728 KRTAP2-1Q9BYU5 128 aa1.74□□□□□ -2.13
PRPF8-211ENST00000574728 A0A1B0GU69 56 aa1.73□□□□□ -2.13
PRPF8-211ENST00000574728 KRTAP5-7Q6L8G8 165 aa1.73□□□□□ -2.13
PRPF8-211ENST00000574728 C10orf95Q9H7T3 257 aa1.73□□□□□ -2.13
PRPF8-211ENST00000574728 HMCN1Q96RW7 5635 aa1.73□□□□□ -2.13
PRPF8-211ENST00000574728 GPR98Q8WXG9 6306 aa1.72□□□□□ -2.13
PRPF8-211ENST00000574728 KRTAP12-4P60329 112 aa1.72□□□□□ -2.13
PRPF8-211ENST00000574728 KRTAP19-5Q3LI72 72 aa1.72□□□□□ -2.13
PRPF8-211ENST00000574728 KRTAP19-3Q7Z4W3 81 aa1.71□□□□□ -2.14
PRPF8-211ENST00000574728 INE1O15225 51 aa1.69□□□□□ -2.14
PRPF8-211ENST00000574728 MT1LQ93083 61 aa1.69□□□□□ -2.14
PRPF8-211ENST00000574728 MUC19Q7Z5P9 8384 aa1.68□□□□□ -2.14
PRPF8-211ENST00000574728 MT1GP13640 62 aa1.67□□□□□ -2.14
PRPF8-211ENST00000574728 MT1MQ8N339 61 aa1.67□□□□□ -2.14
PRPF8-211ENST00000574728 AHNAK2Q8IVF2 5795 aa1.66□□□□□ -2.14
PRPF8-211ENST00000574728 TNP1P09430 55 aa1.63□□□□□ -2.15
PRPF8-211ENST00000574728 SYNE1Q8NF91 8797 aaKnown RBP1.56□□□□□ -2.16
PRPF8-211ENST00000574728 MT4P47944 62 aa1.53□□□□□ -2.16
PRPF8-211ENST00000574728 KRTAP20-2Q3LI61 65 aa1.49□□□□□ -2.17
PRPF8-211ENST00000574728 KRTAP5-10Q6L8G5 202 aa1.49□□□□□ -2.17
PRPF8-211ENST00000574728 KRTAP21-2Q3LI59 83 aa1.46□□□□□ -2.18
PRPF8-211ENST00000574728 KRTAP6-1Q3LI64 71 aa1.43□□□□□ -2.18
PRPF8-211ENST00000574728 AHNAKQ09666 5890 aaKnown RBP1.42□□□□□ -2.18
PRPF8-211ENST00000574728 MT1AP04731 61 aa1.42□□□□□ -2.18
PRPF8-211ENST00000574728 MUC5BQ9HC84 5762 aaPredicted RBP1.41□□□□□ -2.18
PRPF8-211ENST00000574728 MUC5ACP98088 5654 aa1.39□□□□□ -2.19
PRPF8-211ENST00000574728 KRTAP6-2Q3LI66 62 aa1.34□□□□□ -2.19
PRPF8-211ENST00000574728 PHGR1C9JFL3 82 aa0.87□□□□□ -2.27
PRPF8-211ENST00000574728 PRM1P04553 51 aa0.82□□□□□ -2.28
PRPF8-211ENST00000574728 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
PRPF8-211ENST00000574728 KRTAP21-1Q3LI58 79 aa0.64□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 156.6 ms