RNA–Protein interactions for RNA: ENST00000574435.1

XPO6-223, Transcript of exportin 6, human

TSL 5

Gene XPO6, Length 765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
XPO6-223	ENST00000574435	KRTAP19-3	Q7Z4W3	81 aa		5.83	□□□□□ -1.48
XPO6-223	ENST00000574435	KRTAP19-4	Q3LI73	84 aa		5.82	□□□□□ -1.48
XPO6-223	ENST00000574435	MDN1	Q9NU22	5596 aa		5.79	□□□□□ -1.48
XPO6-223	ENST00000574435	MT1G	P13640	62 aa		5.77	□□□□□ -1.49
XPO6-223	ENST00000574435	LCE5A	Q5TCM9	118 aa		5.76	□□□□□ -1.49
XPO6-223	ENST00000574435	MT1L	Q93083	61 aa		5.76	□□□□□ -1.49
XPO6-223	ENST00000574435	NEB	P20929	6669 aa		5.75	□□□□□ -1.49
XPO6-223	ENST00000574435	SPRR2D	P22532	72 aa		5.71	□□□□□ -1.5
XPO6-223	ENST00000574435	KRTAP15-1	Q3LI76	137 aa		5.7	□□□□□ -1.5
XPO6-223	ENST00000574435	KTN1-AS1	Q86SY8	53 aa		5.69	□□□□□ -1.5
XPO6-223	ENST00000574435	MT1M	Q8N339	61 aa		5.62	□□□□□ -1.51
XPO6-223	ENST00000574435	KRTAP2-3	P0C7H8	128 aa		5.58	□□□□□ -1.52
XPO6-223	ENST00000574435	KRTAP20-1	Q3LI63	56 aa		5.58	□□□□□ -1.52
XPO6-223	ENST00000574435	KRTAP2-4	Q9BYR9	128 aa		5.58	□□□□□ -1.52
XPO6-223	ENST00000574435	PRAC1	Q96KF2	57 aa		5.55	□□□□□ -1.52
XPO6-223	ENST00000574435	LCE3B	Q5TA77	95 aa		5.51	□□□□□ -1.53
XPO6-223	ENST00000574435	LCE3C	Q5T5A8	94 aa		5.48	□□□□□ -1.53
XPO6-223	ENST00000574435	KRTAP2-2	Q9BYT5	123 aa		5.44	□□□□□ -1.54
XPO6-223	ENST00000574435	KRTAP2-1	Q9BYU5	128 aa		5.44	□□□□□ -1.54
XPO6-223	ENST00000574435	KRTAP4-7	Q9BYR0	210 aa		5.36	□□□□□ -1.55
XPO6-223	ENST00000574435	GPR98	Q8WXG9	6306 aa		5.35	□□□□□ -1.55
XPO6-223	ENST00000574435	SVIP	Q8NHG7	77 aa		5.33	□□□□□ -1.56
XPO6-223	ENST00000574435	KRTAP4-3	Q9BYR4	195 aa		5.32	□□□□□ -1.56
XPO6-223	ENST00000574435	DST	Q03001	7570 aa	Known RBP	5.32	□□□□□ -1.56
XPO6-223	ENST00000574435	LCE4A	Q5TA78	99 aa		5.15	□□□□□ -1.59
XPO6-223	ENST00000574435	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.12	□□□□□ -1.59
XPO6-223	ENST00000574435	SPRR5	A0A1B0GTR4	108 aa		5.1	□□□□□ -1.59
XPO6-223	ENST00000574435	KRTAP5-4	Q6L8H1	288 aa		5.1	□□□□□ -1.59
XPO6-223	ENST00000574435	LOC100996750	A0A140TA64	210 aa		5.07	□□□□□ -1.6
XPO6-223	ENST00000574435	KRTAP9-6	A8MVA2	160 aa		5.05	□□□□□ -1.6
XPO6-223	ENST00000574435	KRTAP4-6	Q9BYQ5	205 aa		5.02	□□□□□ -1.61
XPO6-223	ENST00000574435	MT1A	P04731	61 aa		4.94	□□□□□ -1.62
XPO6-223	ENST00000574435	KRTAP12-4	P60329	112 aa		4.93	□□□□□ -1.62
XPO6-223	ENST00000574435	LCE1D	Q5T752	114 aa		4.91	□□□□□ -1.62
XPO6-223	ENST00000574435		H3BS24	57 aa		4.9	□□□□□ -1.63
XPO6-223	ENST00000574435	MT4	P47944	62 aa		4.89	□□□□□ -1.63
XPO6-223	ENST00000574435	KRTAP4-9	Q9BYQ8	210 aa		4.88	□□□□□ -1.63
XPO6-223	ENST00000574435	LUZP6	Q538Z0	58 aa		4.82	□□□□□ -1.64
XPO6-223	ENST00000574435	KRTAP6-1	Q3LI64	71 aa		4.81	□□□□□ -1.64
XPO6-223	ENST00000574435	SYNE1	Q8NF91	8797 aa	Known RBP	4.77	□□□□□ -1.65
XPO6-223	ENST00000574435	KRTAP20-2	Q3LI61	65 aa		4.76	□□□□□ -1.65
XPO6-223	ENST00000574435	HMCN1	Q96RW7	5635 aa		4.74	□□□□□ -1.65
XPO6-223	ENST00000574435	KRTAP9-4	Q9BYQ2	154 aa		4.7	□□□□□ -1.66
XPO6-223	ENST00000574435	KRTAP5-3	Q6L8H2	238 aa		4.59	□□□□□ -1.67
XPO6-223	ENST00000574435	KRTAP5-2	Q701N4	177 aa		4.57	□□□□□ -1.68
XPO6-223	ENST00000574435	MT3	P25713	68 aa		4.52	□□□□□ -1.69
XPO6-223	ENST00000574435	AHNAK2	Q8IVF2	5795 aa		4.51	□□□□□ -1.69
XPO6-223	ENST00000574435	KRTAP6-2	Q3LI66	62 aa		4.5	□□□□□ -1.69
XPO6-223	ENST00000574435	KRTAP4-12	Q9BQ66	201 aa		4.39	□□□□□ -1.71
XPO6-223	ENST00000574435	KRTAP5-10	Q6L8G5	202 aa		4.34	□□□□□ -1.71
XPO6-223	ENST00000574435	KRTAP9-9	Q9BYP9	154 aa		4.33	□□□□□ -1.72
XPO6-223	ENST00000574435	KRTAP5-7	Q6L8G8	165 aa		4.32	□□□□□ -1.72
XPO6-223	ENST00000574435	NDUFAF8	A1L188	74 aa		4.24	□□□□□ -1.73
XPO6-223	ENST00000574435	KRTAP4-11	Q9BYQ6	195 aa		4.23	□□□□□ -1.73
XPO6-223	ENST00000574435	AHNAK	Q09666	5890 aa	Known RBP	4.08	□□□□□ -1.76
XPO6-223	ENST00000574435	LCE1E	Q5T753	118 aa		4.07	□□□□□ -1.76
XPO6-223	ENST00000574435	LCE3D	Q9BYE3	92 aa		4.07	□□□□□ -1.76
XPO6-223	ENST00000574435	KRTAP5-8	O75690	187 aa		4.06	□□□□□ -1.76
XPO6-223	ENST00000574435	OBSCN	Q5VST9	7968 aa		4.04	□□□□□ -1.76
XPO6-223	ENST00000574435	KRTAP5-1	Q6L8H4	278 aa		3.97	□□□□□ -1.77
XPO6-223	ENST00000574435	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.95	□□□□□ -1.78
XPO6-223	ENST00000574435	KRTAP4-2	Q9BYR5	136 aa		3.93	□□□□□ -1.78
XPO6-223	ENST00000574435	LCE3E	Q5T5B0	92 aa		3.92	□□□□□ -1.78
XPO6-223	ENST00000574435	MUC5AC	P98088	5654 aa		3.85	□□□□□ -1.79
XPO6-223	ENST00000574435		A0A0A0MQY5	61 aa		3.78	□□□□□ -1.8
XPO6-223	ENST00000574435	LCE1C	Q5T751	118 aa		3.76	□□□□□ -1.81
XPO6-223	ENST00000574435	LCE1B	Q5T7P3	118 aa		3.76	□□□□□ -1.81
XPO6-223	ENST00000574435	INE1	O15225	51 aa		3.65	□□□□□ -1.83
XPO6-223	ENST00000574435	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.51	□□□□□ -1.85
XPO6-223	ENST00000574435	KRTAP5-11	Q6L8G4	156 aa		3.37	□□□□□ -1.87
XPO6-223	ENST00000574435	LCE1F	Q5T754	118 aa		3.21	□□□□□ -1.9
XPO6-223	ENST00000574435	PRM1	P04553	51 aa		3.18	□□□□□ -1.9
XPO6-223	ENST00000574435	KRTAP21-2	Q3LI59	83 aa		3.17	□□□□□ -1.9
XPO6-223	ENST00000574435	PHGR1	C9JFL3	82 aa		2.86	□□□□□ -1.95
XPO6-223	ENST00000574435	KRTAP4-4	Q9BYR3	166 aa		2.72	□□□□□ -1.97
XPO6-223	ENST00000574435	MUC19	Q7Z5P9	8384 aa		2.45	□□□□□ -2.02
XPO6-223	ENST00000574435	KRTAP21-1	Q3LI58	79 aa		1.96	□□□□□ -2.1
XPO6-223	ENST00000574435	MUC16	Q8WXI7	14507 aa		1.87	□□□□□ -2.11

Retrieved 78 of 20,778 RNA–protein pairs in 8.4 ms