RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 KRTAP19-4Q3LI73 84 aa10.19□□□□□ -0.78
CTDNEP1-210ENST00000574322 LUZP6Q538Z0 58 aa10.12□□□□□ -0.79
CTDNEP1-210ENST00000574322 LCE3CQ5T5A8 94 aa10.11□□□□□ -0.79
CTDNEP1-210ENST00000574322 MT1LQ93083 61 aa10.09□□□□□ -0.79
CTDNEP1-210ENST00000574322 NDUFAF8A1L188 74 aa10.07□□□□□ -0.8
CTDNEP1-210ENST00000574322 MDN1Q9NU22 5596 aa10.05□□□□□ -0.8
CTDNEP1-210ENST00000574322 NEBP20929 6669 aa9.99□□□□□ -0.81
CTDNEP1-210ENST00000574322 SPRR2EP22531 72 aa9.95□□□□□ -0.82
CTDNEP1-210ENST00000574322 SPRR2BP35325 72 aa9.95□□□□□ -0.82
CTDNEP1-210ENST00000574322 SPRR2AP35326 72 aa9.95□□□□□ -0.82
CTDNEP1-210ENST00000574322 LCE1AQ5T7P2 110 aa9.9□□□□□ -0.83
CTDNEP1-210ENST00000574322 KRTAP19-3Q7Z4W3 81 aa9.8□□□□□ -0.84
CTDNEP1-210ENST00000574322 KRTAP4-7Q9BYR0 210 aa9.76□□□□□ -0.85
CTDNEP1-210ENST00000574322 MT1GP13640 62 aa9.76□□□□□ -0.85
CTDNEP1-210ENST00000574322 MT1MQ8N339 61 aa9.63□□□□□ -0.87
CTDNEP1-210ENST00000574322 LCE5AQ5TCM9 118 aa9.62□□□□□ -0.87
CTDNEP1-210ENST00000574322 SPRR2DP22532 72 aa9.6□□□□□ -0.87
CTDNEP1-210ENST00000574322 KRTAP9-6A8MVA2 160 aa9.59□□□□□ -0.87
CTDNEP1-210ENST00000574322 KRTAP20-1Q3LI63 56 aa9.43□□□□□ -0.9
CTDNEP1-210ENST00000574322 KRTAP4-3Q9BYR4 195 aa9.42□□□□□ -0.9
CTDNEP1-210ENST00000574322 KRTAP2-3P0C7H8 128 aa9.38□□□□□ -0.91
CTDNEP1-210ENST00000574322 KRTAP2-4Q9BYR9 128 aa9.38□□□□□ -0.91
CTDNEP1-210ENST00000574322 H3BS24 57 aa9.32□□□□□ -0.92
CTDNEP1-210ENST00000574322 LCE3BQ5TA77 95 aa9.28□□□□□ -0.92
CTDNEP1-210ENST00000574322 DSTQ03001 7570 aaKnown RBP9.18□□□□□ -0.94
CTDNEP1-210ENST00000574322 LOC100996750A0A140TA64 210 aa9.15□□□□□ -0.94
CTDNEP1-210ENST00000574322 KRTAP2-2Q9BYT5 123 aa9.13□□□□□ -0.95
CTDNEP1-210ENST00000574322 KRTAP2-1Q9BYU5 128 aa9.13□□□□□ -0.95
CTDNEP1-210ENST00000574322 A0A0A0MQY5 61 aa8.91□□□□□ -0.98
CTDNEP1-210ENST00000574322 KRTAP5-5Q701N2 237 aaPredicted RBP8.71□□□□□ -1.02
CTDNEP1-210ENST00000574322 MT1AP04731 61 aa8.58□□□□□ -1.04
CTDNEP1-210ENST00000574322 LCE4AQ5TA78 99 aa8.51□□□□□ -1.05
CTDNEP1-210ENST00000574322 KRTAP6-1Q3LI64 71 aa8.49□□□□□ -1.05
CTDNEP1-210ENST00000574322 KRTAP5-4Q6L8H1 288 aa8.48□□□□□ -1.05
CTDNEP1-210ENST00000574322 KRTAP4-9Q9BYQ8 210 aa8.45□□□□□ -1.06
CTDNEP1-210ENST00000574322 INE1O15225 51 aa8.37□□□□□ -1.07
CTDNEP1-210ENST00000574322 MT4P47944 62 aa8.36□□□□□ -1.07
CTDNEP1-210ENST00000574322 LCE1DQ5T752 114 aa8.32□□□□□ -1.08
CTDNEP1-210ENST00000574322 KRTAP4-6Q9BYQ5 205 aa8.19□□□□□ -1.1
CTDNEP1-210ENST00000574322 HMCN1Q96RW7 5635 aa8.19□□□□□ -1.1
CTDNEP1-210ENST00000574322 SYNE1Q8NF91 8797 aaKnown RBP8.19□□□□□ -1.1
CTDNEP1-210ENST00000574322 KRTAP12-4P60329 112 aa8.14□□□□□ -1.11
CTDNEP1-210ENST00000574322 KRTAP9-4Q9BYQ2 154 aa8.13□□□□□ -1.11
CTDNEP1-210ENST00000574322 KRTAP20-2Q3LI61 65 aa7.98□□□□□ -1.13
CTDNEP1-210ENST00000574322 KRTAP6-2Q3LI66 62 aa7.75□□□□□ -1.17
CTDNEP1-210ENST00000574322 MT3P25713 68 aa7.75□□□□□ -1.17
CTDNEP1-210ENST00000574322 KRTAP5-3Q6L8H2 238 aa7.7□□□□□ -1.18
CTDNEP1-210ENST00000574322 LCE3DQ9BYE3 92 aa7.63□□□□□ -1.19
CTDNEP1-210ENST00000574322 AHNAK2Q8IVF2 5795 aa7.57□□□□□ -1.2
CTDNEP1-210ENST00000574322 KRTAP5-2Q701N4 177 aa7.56□□□□□ -1.2
CTDNEP1-210ENST00000574322 GPR98Q8WXG9 6306 aa7.48□□□□□ -1.21
CTDNEP1-210ENST00000574322 LCE3EQ5T5B0 92 aa7.45□□□□□ -1.22
CTDNEP1-210ENST00000574322 KRTAP5-10Q6L8G5 202 aa7.32□□□□□ -1.24
CTDNEP1-210ENST00000574322 KRTAP4-11Q9BYQ6 195 aa7.1□□□□□ -1.27
CTDNEP1-210ENST00000574322 OBSCNQ5VST9 7968 aa7.05□□□□□ -1.28
CTDNEP1-210ENST00000574322 KRTAP5-7Q6L8G8 165 aa6.93□□□□□ -1.3
CTDNEP1-210ENST00000574322 KRTAP5-8O75690 187 aa6.84□□□□□ -1.31
CTDNEP1-210ENST00000574322 LCE1EQ5T753 118 aa6.72□□□□□ -1.33
CTDNEP1-210ENST00000574322 KRTAP5-1Q6L8H4 278 aa6.65□□□□□ -1.34
CTDNEP1-210ENST00000574322 PRM1P04553 51 aa6.58□□□□□ -1.36
CTDNEP1-210ENST00000574322 MUC5ACP98088 5654 aa6.48□□□□□ -1.37
CTDNEP1-210ENST00000574322 KRTAP9-9Q9BYP9 154 aa6.36□□□□□ -1.39
CTDNEP1-210ENST00000574322 KRTAP4-12Q9BQ66 201 aa6.32□□□□□ -1.4
CTDNEP1-210ENST00000574322 LCE1CQ5T751 118 aa6.25□□□□□ -1.41
CTDNEP1-210ENST00000574322 LCE1BQ5T7P3 118 aa6.25□□□□□ -1.41
CTDNEP1-210ENST00000574322 KRTAP4-2Q9BYR5 136 aa6.23□□□□□ -1.41
CTDNEP1-210ENST00000574322 MUC5BQ9HC84 5762 aaPredicted RBP6.16□□□□□ -1.42
CTDNEP1-210ENST00000574322 AHNAKQ09666 5890 aaKnown RBP6□□□□□ -1.45
CTDNEP1-210ENST00000574322 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.91□□□□□ -1.46
CTDNEP1-210ENST00000574322 KRTAP21-2Q3LI59 83 aa5.58□□□□□ -1.52
CTDNEP1-210ENST00000574322 KRTAP5-11Q6L8G4 156 aa5.51□□□□□ -1.53
CTDNEP1-210ENST00000574322 LCE1FQ5T754 118 aa5.17□□□□□ -1.58
CTDNEP1-210ENST00000574322 KRTAP4-4Q9BYR3 166 aa4.86□□□□□ -1.63
CTDNEP1-210ENST00000574322 PHGR1C9JFL3 82 aa4.74□□□□□ -1.65
CTDNEP1-210ENST00000574322 MUC19Q7Z5P9 8384 aa4.27□□□□□ -1.73
CTDNEP1-210ENST00000574322 KRTAP21-1Q3LI58 79 aa4.12□□□□□ -1.75
CTDNEP1-210ENST00000574322 MUC16Q8WXI7 14507 aa3.11□□□□□ -1.91
Retrieved 77 of 20,778 RNA–protein pairs in 11.8 ms