RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 SPINT4Q6UDR6 99 aa3.79□□□□□ -1.8
RPA1-206ENST00000573994 SMIM26A0A096LP01 95 aa3.76□□□□□ -1.81
RPA1-206ENST00000573994 A0A1B0GU69 56 aa3.76□□□□□ -1.81
RPA1-206ENST00000573994 LCE1FQ5T754 118 aa3.76□□□□□ -1.81
RPA1-206ENST00000573994 ANAPC13Q9BS18 74 aa3.76□□□□□ -1.81
RPA1-206ENST00000573994 KRTAP19-7Q3SYF9 63 aa3.75□□□□□ -1.81
RPA1-206ENST00000573994 KRTAP5-4Q6L8H1 288 aa3.75□□□□□ -1.81
RPA1-206ENST00000573994 KRTAP12-1P59990 96 aa3.74□□□□□ -1.81
RPA1-206ENST00000573994 MT1EP04732 61 aa3.73□□□□□ -1.81
RPA1-206ENST00000573994 ATP5EP56381 51 aaPredicted RBP3.71□□□□□ -1.82
RPA1-206ENST00000573994 A8MU10 97 aa3.7□□□□□ -1.82
RPA1-206ENST00000573994 KRTAP4-4Q9BYR3 166 aa3.7□□□□□ -1.82
RPA1-206ENST00000573994 KRTAP19-3Q7Z4W3 81 aa3.69□□□□□ -1.82
RPA1-206ENST00000573994 PRR15LQ9BU68 103 aa3.69□□□□□ -1.82
RPA1-206ENST00000573994 DSTQ03001 7570 aaKnown RBP3.68□□□□□ -1.82
RPA1-206ENST00000573994 CCDC179H3BU77 68 aa3.68□□□□□ -1.82
RPA1-206ENST00000573994 KRTAP19-5Q3LI72 72 aa3.67□□□□□ -1.82
RPA1-206ENST00000573994 GPR98Q8WXG9 6306 aa3.63□□□□□ -1.83
RPA1-206ENST00000573994 TNP1P09430 55 aa3.61□□□□□ -1.83
RPA1-206ENST00000573994 MT1GP13640 62 aa3.61□□□□□ -1.83
RPA1-206ENST00000573994 PP632Q6XCG6 107 aa3.61□□□□□ -1.83
RPA1-206ENST00000573994 LINC01558Q9Y6Z2 57 aa3.6□□□□□ -1.83
RPA1-206ENST00000573994 LCE3CQ5T5A8 94 aa3.59□□□□□ -1.83
RPA1-206ENST00000573994 C10orf95Q9H7T3 257 aa3.59□□□□□ -1.83
RPA1-206ENST00000573994 LCE3AQ5TA76 89 aa3.58□□□□□ -1.84
RPA1-206ENST00000573994 TMEM258P61165 79 aa3.57□□□□□ -1.84
RPA1-206ENST00000573994 MT1LQ93083 61 aa3.56□□□□□ -1.84
RPA1-206ENST00000573994 NDUFAF8A1L188 74 aa3.55□□□□□ -1.84
RPA1-206ENST00000573994 UQCR11O14957 56 aa3.55□□□□□ -1.84
RPA1-206ENST00000573994 MT1MQ8N339 61 aa3.55□□□□□ -1.84
RPA1-206ENST00000573994 HMCN1Q96RW7 5635 aa3.51□□□□□ -1.85
RPA1-206ENST00000573994 KRTAP4-3Q9BYR4 195 aa3.5□□□□□ -1.85
RPA1-206ENST00000573994 MT4P47944 62 aa3.45□□□□□ -1.86
RPA1-206ENST00000573994 K7ERS5 55 aa3.44□□□□□ -1.86
RPA1-206ENST00000573994 MIR22HGQ0VDD5 57 aa3.44□□□□□ -1.86
RPA1-206ENST00000573994 V9GYY9 64 aa3.44□□□□□ -1.86
RPA1-206ENST00000573994 KRTAP12-3P60328 96 aa3.42□□□□□ -1.86
RPA1-206ENST00000573994 KRTAP25-1Q3LHN0 102 aa3.42□□□□□ -1.86
RPA1-206ENST00000573994 AHNAK2Q8IVF2 5795 aa3.41□□□□□ -1.86
RPA1-206ENST00000573994 Q1T7F1 81 aa3.37□□□□□ -1.87
RPA1-206ENST00000573994 PSPHP1O15172 72 aa3.35□□□□□ -1.87
RPA1-206ENST00000573994 OBSCNQ5VST9 7968 aa3.3□□□□□ -1.88
RPA1-206ENST00000573994 KRTAP5-5Q701N2 237 aaPredicted RBP3.25□□□□□ -1.89
RPA1-206ENST00000573994 A6NED7 52 aa3.24□□□□□ -1.89
RPA1-206ENST00000573994 LCE3EQ5T5B0 92 aa3.24□□□□□ -1.89
RPA1-206ENST00000573994 KRTAP5-10Q6L8G5 202 aa3.22□□□□□ -1.89
RPA1-206ENST00000573994 PRAC1Q96KF2 57 aa3.22□□□□□ -1.89
RPA1-206ENST00000573994 CDC42SE1Q9NRR8 79 aa3.22□□□□□ -1.89
RPA1-206ENST00000573994 RPS28P62857 69 aaKnown RBP3.21□□□□□ -1.9
RPA1-206ENST00000573994 SPRR5A0A1B0GTR4 108 aa3.2□□□□□ -1.9
RPA1-206ENST00000573994 KRTAP20-2Q3LI61 65 aa3.2□□□□□ -1.9
RPA1-206ENST00000573994 KRTAP12-4P60329 112 aa3.19□□□□□ -1.9
RPA1-206ENST00000573994 SYNE1Q8NF91 8797 aaKnown RBP3.16□□□□□ -1.9
RPA1-206ENST00000573994 ROMO1P60602 79 aa3.15□□□□□ -1.91
RPA1-206ENST00000573994 KRTAP5-7Q6L8G8 165 aa3.08□□□□□ -1.92
RPA1-206ENST00000573994 KRTAP5-2Q701N4 177 aa3.05□□□□□ -1.92
RPA1-206ENST00000573994 KRTAP6-1Q3LI64 71 aa3.02□□□□□ -1.93
RPA1-206ENST00000573994 MT1AP04731 61 aa3.01□□□□□ -1.93
RPA1-206ENST00000573994 LCE1CQ5T751 118 aa2.91□□□□□ -1.94
RPA1-206ENST00000573994 LCE1BQ5T7P3 118 aa2.91□□□□□ -1.94
RPA1-206ENST00000573994 KRTAP6-2Q3LI66 62 aa2.89□□□□□ -1.95
RPA1-206ENST00000573994 AHNAKQ09666 5890 aaKnown RBP2.85□□□□□ -1.95
RPA1-206ENST00000573994 MUC5BQ9HC84 5762 aaPredicted RBP2.82□□□□□ -1.96
RPA1-206ENST00000573994 KRTAP5-8O75690 187 aa2.82□□□□□ -1.96
RPA1-206ENST00000573994 MUC5ACP98088 5654 aa2.78□□□□□ -1.96
RPA1-206ENST00000573994 BRK1Q8WUW1 75 aa2.76□□□□□ -1.97
RPA1-206ENST00000573994 PMAIP1Q13794 54 aa2.61□□□□□ -1.99
RPA1-206ENST00000573994 LCE3DQ9BYE3 92 aa2.56□□□□□ -2
RPA1-206ENST00000573994 PRO0628Q9UI54 55 aa2.48□□□□□ -2.01
RPA1-206ENST00000573994 KTN1-AS1Q86SY8 53 aa2.35□□□□□ -2.03
RPA1-206ENST00000573994 LUZP6Q538Z0 58 aa2.33□□□□□ -2.04
RPA1-206ENST00000573994 MUC19Q7Z5P9 8384 aa2.28□□□□□ -2.04
RPA1-206ENST00000573994 KRTAP21-2Q3LI59 83 aa2.05□□□□□ -2.08
RPA1-206ENST00000573994 PHGR1C9JFL3 82 aa1.89□□□□□ -2.11
RPA1-206ENST00000573994 PRM1P04553 51 aa1.61□□□□□ -2.15
RPA1-206ENST00000573994 INE1O15225 51 aa1.51□□□□□ -2.17
RPA1-206ENST00000573994 KRTAP21-1Q3LI58 79 aa1.44□□□□□ -2.18
RPA1-206ENST00000573994 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 10.9 ms