RNA–Protein interactions for RNA: ENST00000573857.5

TVP23A-208, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-208ENST00000573857 KRTAP19-3Q7Z4W3 81 aa5.33□□□□□ -1.56
TVP23A-208ENST00000573857 KRTAP4-9Q9BYQ8 210 aa5.27□□□□□ -1.57
TVP23A-208ENST00000573857 H3BS24 57 aa5.25□□□□□ -1.57
TVP23A-208ENST00000573857 TNP1P09430 55 aa5.24□□□□□ -1.57
TVP23A-208ENST00000573857 KRTAP19-5Q3LI72 72 aa5.2□□□□□ -1.58
TVP23A-208ENST00000573857 C10orf95Q9H7T3 257 aa5.2□□□□□ -1.58
TVP23A-208ENST00000573857 CDC42SE1Q9NRR8 79 aa5.18□□□□□ -1.58
TVP23A-208ENST00000573857 MT1GP13640 62 aa5.17□□□□□ -1.58
TVP23A-208ENST00000573857 LCE1DQ5T752 114 aa5.14□□□□□ -1.59
TVP23A-208ENST00000573857 PP632Q6XCG6 107 aa5.14□□□□□ -1.59
TVP23A-208ENST00000573857 HMCN1Q96RW7 5635 aa5.14□□□□□ -1.59
TVP23A-208ENST00000573857 KRTAP25-1Q3LHN0 102 aa5.11□□□□□ -1.59
TVP23A-208ENST00000573857 A0A0A0MQY5 61 aa5.09□□□□□ -1.59
TVP23A-208ENST00000573857 MT1MQ8N339 61 aa5.09□□□□□ -1.59
TVP23A-208ENST00000573857 LCE4AQ5TA78 99 aa5.08□□□□□ -1.6
TVP23A-208ENST00000573857 MT1LQ93083 61 aa5.08□□□□□ -1.6
TVP23A-208ENST00000573857 MT4P47944 62 aa5.05□□□□□ -1.6
TVP23A-208ENST00000573857 AHNAK2Q8IVF2 5795 aa5.02□□□□□ -1.61
TVP23A-208ENST00000573857 ROMO1P60602 79 aa5□□□□□ -1.61
TVP23A-208ENST00000573857 LCE3AQ5TA76 89 aa4.99□□□□□ -1.61
TVP23A-208ENST00000573857 KRTAP4-3Q9BYR4 195 aa4.99□□□□□ -1.61
TVP23A-208ENST00000573857 KRTAP23-1A1A580 65 aa4.97□□□□□ -1.61
TVP23A-208ENST00000573857 KRTAP5-4Q6L8H1 288 aa4.97□□□□□ -1.61
TVP23A-208ENST00000573857 BRK1Q8WUW1 75 aa4.92□□□□□ -1.62
TVP23A-208ENST00000573857 KRTAP4-6Q9BYQ5 205 aa4.9□□□□□ -1.63
TVP23A-208ENST00000573857 KRTAP5-10Q6L8G5 202 aa4.87□□□□□ -1.63
TVP23A-208ENST00000573857 KRTAP12-3P60328 96 aa4.86□□□□□ -1.63
TVP23A-208ENST00000573857 KRTAP4-7Q9BYR0 210 aa4.82□□□□□ -1.64
TVP23A-208ENST00000573857 KRTAP19-4Q3LI73 84 aa4.77□□□□□ -1.65
TVP23A-208ENST00000573857 KRTAP5-5Q701N2 237 aaPredicted RBP4.71□□□□□ -1.66
TVP23A-208ENST00000573857 KRTAP20-2Q3LI61 65 aa4.7□□□□□ -1.66
TVP23A-208ENST00000573857 KRTAP5-7Q6L8G8 165 aa4.7□□□□□ -1.66
TVP23A-208ENST00000573857 KRTAP5-3Q6L8H2 238 aa4.7□□□□□ -1.66
TVP23A-208ENST00000573857 PRO0628Q9UI54 55 aa4.7□□□□□ -1.66
TVP23A-208ENST00000573857 PMAIP1Q13794 54 aa4.68□□□□□ -1.66
TVP23A-208ENST00000573857 SPRR5A0A1B0GTR4 108 aa4.66□□□□□ -1.66
TVP23A-208ENST00000573857 KRTAP15-1Q3LI76 137 aa4.66□□□□□ -1.66
TVP23A-208ENST00000573857 KRTAP12-4P60329 112 aa4.61□□□□□ -1.67
TVP23A-208ENST00000573857 LOC100996750A0A140TA64 210 aa4.57□□□□□ -1.68
TVP23A-208ENST00000573857 LCE3CQ5T5A8 94 aa4.51□□□□□ -1.69
TVP23A-208ENST00000573857 SYNE1Q8NF91 8797 aaKnown RBP4.48□□□□□ -1.69
TVP23A-208ENST00000573857 KRTAP5-2Q701N4 177 aa4.33□□□□□ -1.72
TVP23A-208ENST00000573857 KTN1-AS1Q86SY8 53 aa4.33□□□□□ -1.72
TVP23A-208ENST00000573857 KRTAP4-11Q9BYQ6 195 aa4.33□□□□□ -1.72
TVP23A-208ENST00000573857 MT1AP04731 61 aa4.31□□□□□ -1.72
TVP23A-208ENST00000573857 KRTAP6-1Q3LI64 71 aa4.3□□□□□ -1.72
TVP23A-208ENST00000573857 PRAC1Q96KF2 57 aa4.3□□□□□ -1.72
TVP23A-208ENST00000573857 KRTAP5-8O75690 187 aa4.19□□□□□ -1.74
TVP23A-208ENST00000573857 KRTAP9-4Q9BYQ2 154 aa4.19□□□□□ -1.74
TVP23A-208ENST00000573857 KRTAP9-6A8MVA2 160 aa4.17□□□□□ -1.74
TVP23A-208ENST00000573857 AHNAKQ09666 5890 aaKnown RBP4.17□□□□□ -1.74
TVP23A-208ENST00000573857 MUC5ACP98088 5654 aa4.16□□□□□ -1.74
TVP23A-208ENST00000573857 KRTAP6-2Q3LI66 62 aa4.15□□□□□ -1.75
TVP23A-208ENST00000573857 MUC5BQ9HC84 5762 aaPredicted RBP4.14□□□□□ -1.75
TVP23A-208ENST00000573857 OBSCNQ5VST9 7968 aa4.09□□□□□ -1.75
TVP23A-208ENST00000573857 KRTAP9-9Q9BYP9 154 aa4□□□□□ -1.77
TVP23A-208ENST00000573857 MT3P25713 68 aa3.95□□□□□ -1.78
TVP23A-208ENST00000573857 KRTAP5-1Q6L8H4 278 aa3.92□□□□□ -1.78
TVP23A-208ENST00000573857 LUZP6Q538Z0 58 aa3.9□□□□□ -1.79
TVP23A-208ENST00000573857 NDUFAF8A1L188 74 aa3.7□□□□□ -1.82
TVP23A-208ENST00000573857 LCE1EQ5T753 118 aa3.68□□□□□ -1.82
TVP23A-208ENST00000573857 KRTAP4-2Q9BYR5 136 aa3.5□□□□□ -1.85
TVP23A-208ENST00000573857 LCE1BQ5T7P3 118 aa3.47□□□□□ -1.85
TVP23A-208ENST00000573857 LCE1CQ5T751 118 aa3.42□□□□□ -1.86
TVP23A-208ENST00000573857 LCE3DQ9BYE3 92 aa3.34□□□□□ -1.87
TVP23A-208ENST00000573857 KRTAP4-12Q9BQ66 201 aa3.23□□□□□ -1.89
TVP23A-208ENST00000573857 LCE3EQ5T5B0 92 aa3.19□□□□□ -1.9
TVP23A-208ENST00000573857 KRTAP5-11Q6L8G4 156 aa3.11□□□□□ -1.91
TVP23A-208ENST00000573857 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.09□□□□□ -1.91
TVP23A-208ENST00000573857 LCE1FQ5T754 118 aa3.06□□□□□ -1.92
TVP23A-208ENST00000573857 INE1O15225 51 aa3.05□□□□□ -1.92
TVP23A-208ENST00000573857 KRTAP21-2Q3LI59 83 aa2.84□□□□□ -1.95
TVP23A-208ENST00000573857 PHGR1C9JFL3 82 aa2.83□□□□□ -1.96
TVP23A-208ENST00000573857 KRTAP4-4Q9BYR3 166 aa2.62□□□□□ -1.99
TVP23A-208ENST00000573857 MUC19Q7Z5P9 8384 aa2.52□□□□□ -2.01
TVP23A-208ENST00000573857 PRM1P04553 51 aa2.52□□□□□ -2.01
TVP23A-208ENST00000573857 KRTAP21-1Q3LI58 79 aa2.16□□□□□ -2.06
TVP23A-208ENST00000573857 MUC16Q8WXI7 14507 aa1.79□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 45.7 ms