RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 LINC01554Q52M75 96 aa3.81□□□□□ -1.8
NDE1-207ENST00000573203 KRTAP5-11Q6L8G4 156 aa3.81□□□□□ -1.8
NDE1-207ENST00000573203 A0A0A0MQY5 61 aa3.8□□□□□ -1.8
NDE1-207ENST00000573203 MT1XP80297 61 aa3.8□□□□□ -1.8
NDE1-207ENST00000573203 SPINT4Q6UDR6 99 aa3.8□□□□□ -1.8
NDE1-207ENST00000573203 MUC12Q9UKN1 5478 aa3.8□□□□□ -1.8
NDE1-207ENST00000573203 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.79□□□□□ -1.8
NDE1-207ENST00000573203 KRTAP5-9P26371 169 aa3.78□□□□□ -1.8
NDE1-207ENST00000573203 NEBP20929 6669 aa3.77□□□□□ -1.81
NDE1-207ENST00000573203 KMT2DO14686 5537 aa3.74□□□□□ -1.81
NDE1-207ENST00000573203 MDN1Q9NU22 5596 aa3.73□□□□□ -1.81
NDE1-207ENST00000573203 KRTAP8-1Q8IUC2 63 aa3.7□□□□□ -1.82
NDE1-207ENST00000573203 SPRR2FQ96RM1 72 aa3.7□□□□□ -1.82
NDE1-207ENST00000573203 PRAC1Q96KF2 57 aa3.69□□□□□ -1.82
NDE1-207ENST00000573203 KRTAP25-1Q3LHN0 102 aa3.68□□□□□ -1.82
NDE1-207ENST00000573203 KRTAP20-1Q3LI63 56 aa3.67□□□□□ -1.82
NDE1-207ENST00000573203 CAMK2N1Q7Z7J9 78 aa3.67□□□□□ -1.82
NDE1-207ENST00000573203 C10orf95Q9H7T3 257 aa3.66□□□□□ -1.82
NDE1-207ENST00000573203 SPRR2EP22531 72 aa3.65□□□□□ -1.83
NDE1-207ENST00000573203 SPRR2BP35325 72 aa3.65□□□□□ -1.83
NDE1-207ENST00000573203 SPRR2AP35326 72 aa3.65□□□□□ -1.83
NDE1-207ENST00000573203 KRTAP10-12P60413 245 aa3.61□□□□□ -1.83
NDE1-207ENST00000573203 KRTAP2-3P0C7H8 128 aa3.58□□□□□ -1.84
NDE1-207ENST00000573203 KRTAP2-4Q9BYR9 128 aa3.58□□□□□ -1.84
NDE1-207ENST00000573203 PP632Q6XCG6 107 aa3.57□□□□□ -1.84
NDE1-207ENST00000573203 TNP1P09430 55 aa3.55□□□□□ -1.84
NDE1-207ENST00000573203 SPRR2DP22532 72 aa3.52□□□□□ -1.85
NDE1-207ENST00000573203 KRTAP2-1Q9BYU5 128 aa3.47□□□□□ -1.85
NDE1-207ENST00000573203 LCE1FQ5T754 118 aa3.45□□□□□ -1.86
NDE1-207ENST00000573203 KRTAP19-7Q3SYF9 63 aa3.39□□□□□ -1.87
NDE1-207ENST00000573203 MT1EP04732 61 aa3.37□□□□□ -1.87
NDE1-207ENST00000573203 KRTAP9-6A8MVA2 160 aa3.35□□□□□ -1.87
NDE1-207ENST00000573203 KRTAP19-3Q7Z4W3 81 aa3.35□□□□□ -1.87
NDE1-207ENST00000573203 KRTAP19-5Q3LI72 72 aa3.33□□□□□ -1.88
NDE1-207ENST00000573203 LCE3AQ5TA76 89 aa3.33□□□□□ -1.88
NDE1-207ENST00000573203 KRTAP5-1Q6L8H4 278 aa3.27□□□□□ -1.89
NDE1-207ENST00000573203 DSTQ03001 7570 aaKnown RBP3.27□□□□□ -1.89
NDE1-207ENST00000573203 GPR98Q8WXG9 6306 aa3.26□□□□□ -1.89
NDE1-207ENST00000573203 NDUFAF8A1L188 74 aa3.26□□□□□ -1.89
NDE1-207ENST00000573203 MT1GP13640 62 aa3.26□□□□□ -1.89
NDE1-207ENST00000573203 KRTAP12-3P60328 96 aa3.23□□□□□ -1.89
NDE1-207ENST00000573203 MT1LQ93083 61 aa3.23□□□□□ -1.89
NDE1-207ENST00000573203 LCE3CQ5T5A8 94 aa3.22□□□□□ -1.89
NDE1-207ENST00000573203 MT1MQ8N339 61 aa3.21□□□□□ -1.9
NDE1-207ENST00000573203 SPRR5A0A1B0GTR4 108 aa3.19□□□□□ -1.9
NDE1-207ENST00000573203 KRTAP5-4Q6L8H1 288 aa3.15□□□□□ -1.91
NDE1-207ENST00000573203 KRTAP4-3Q9BYR4 195 aa3.13□□□□□ -1.91
NDE1-207ENST00000573203 KRTAP4-4Q9BYR3 166 aa3.1□□□□□ -1.91
NDE1-207ENST00000573203 MT4P47944 62 aa3.08□□□□□ -1.92
NDE1-207ENST00000573203 LUZP6Q538Z0 58 aa3.07□□□□□ -1.92
NDE1-207ENST00000573203 HMCN1Q96RW7 5635 aa3.04□□□□□ -1.92
NDE1-207ENST00000573203 AHNAK2Q8IVF2 5795 aa2.94□□□□□ -1.94
NDE1-207ENST00000573203 LCE3EQ5T5B0 92 aa2.92□□□□□ -1.94
NDE1-207ENST00000573203 KRTAP5-5Q701N2 237 aaPredicted RBP2.92□□□□□ -1.94
NDE1-207ENST00000573203 KRTAP12-4P60329 112 aa2.88□□□□□ -1.95
NDE1-207ENST00000573203 KRTAP20-2Q3LI61 65 aa2.87□□□□□ -1.95
NDE1-207ENST00000573203 KRTAP5-10Q6L8G5 202 aa2.85□□□□□ -1.95
NDE1-207ENST00000573203 OBSCNQ5VST9 7968 aa2.83□□□□□ -1.96
NDE1-207ENST00000573203 SYNE1Q8NF91 8797 aaKnown RBP2.8□□□□□ -1.96
NDE1-207ENST00000573203 MT1AP04731 61 aa2.74□□□□□ -1.97
NDE1-207ENST00000573203 KRTAP5-7Q6L8G8 165 aa2.74□□□□□ -1.97
NDE1-207ENST00000573203 KRTAP6-1Q3LI64 71 aa2.73□□□□□ -1.97
NDE1-207ENST00000573203 KRTAP5-2Q701N4 177 aa2.66□□□□□ -1.98
NDE1-207ENST00000573203 KRTAP6-2Q3LI66 62 aa2.61□□□□□ -1.99
NDE1-207ENST00000573203 INE1O15225 51 aa2.59□□□□□ -1.99
NDE1-207ENST00000573203 AHNAKQ09666 5890 aaKnown RBP2.52□□□□□ -2.01
NDE1-207ENST00000573203 KRTAP5-8O75690 187 aa2.52□□□□□ -2.01
NDE1-207ENST00000573203 LCE1CQ5T751 118 aa2.52□□□□□ -2.01
NDE1-207ENST00000573203 LCE1BQ5T7P3 118 aa2.52□□□□□ -2.01
NDE1-207ENST00000573203 MUC5BQ9HC84 5762 aaPredicted RBP2.4□□□□□ -2.02
NDE1-207ENST00000573203 MUC5ACP98088 5654 aa2.4□□□□□ -2.03
NDE1-207ENST00000573203 LCE3DQ9BYE3 92 aa2.33□□□□□ -2.04
NDE1-207ENST00000573203 MUC19Q7Z5P9 8384 aa2□□□□□ -2.09
NDE1-207ENST00000573203 PRM1P04553 51 aa1.94□□□□□ -2.1
NDE1-207ENST00000573203 KRTAP21-2Q3LI59 83 aa1.78□□□□□ -2.12
NDE1-207ENST00000573203 PHGR1C9JFL3 82 aa1.68□□□□□ -2.14
NDE1-207ENST00000573203 KRTAP21-1Q3LI58 79 aa1.27□□□□□ -2.21
NDE1-207ENST00000573203 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 67.5 ms