RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 LINC01554Q52M75 96 aa3.81□□□□□ -1.8
NDE1-207ENST00000573203 KRTAP5-11Q6L8G4 156 aa3.81□□□□□ -1.8
NDE1-207ENST00000573203 A0A0A0MQY5 61 aa3.8□□□□□ -1.8
NDE1-207ENST00000573203 MT1XP80297 61 aa3.8□□□□□ -1.8
NDE1-207ENST00000573203 SPINT4Q6UDR6 99 aa3.8□□□□□ -1.8
NDE1-207ENST00000573203 MUC12Q9UKN1 5478 aa3.8□□□□□ -1.8
NDE1-207ENST00000573203 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.79□□□□□ -1.8
NDE1-207ENST00000573203 KRTAP5-9P26371 169 aa3.78□□□□□ -1.8
NDE1-207ENST00000573203 NEBP20929 6669 aa3.77□□□□□ -1.81
NDE1-207ENST00000573203 KMT2DO14686 5537 aa3.74□□□□□ -1.81
NDE1-207ENST00000573203 MDN1Q9NU22 5596 aa3.73□□□□□ -1.81
NDE1-207ENST00000573203 KRTAP8-1Q8IUC2 63 aa3.7□□□□□ -1.82
NDE1-207ENST00000573203 SPRR2FQ96RM1 72 aa3.7□□□□□ -1.82
NDE1-207ENST00000573203 PRAC1Q96KF2 57 aa3.69□□□□□ -1.82
NDE1-207ENST00000573203 KRTAP25-1Q3LHN0 102 aa3.68□□□□□ -1.82
NDE1-207ENST00000573203 KRTAP20-1Q3LI63 56 aa3.67□□□□□ -1.82
NDE1-207ENST00000573203 CAMK2N1Q7Z7J9 78 aa3.67□□□□□ -1.82
NDE1-207ENST00000573203 C10orf95Q9H7T3 257 aa3.66□□□□□ -1.82
NDE1-207ENST00000573203 SPRR2EP22531 72 aa3.65□□□□□ -1.83
NDE1-207ENST00000573203 SPRR2BP35325 72 aa3.65□□□□□ -1.83
NDE1-207ENST00000573203 SPRR2AP35326 72 aa3.65□□□□□ -1.83
NDE1-207ENST00000573203 KRTAP10-12P60413 245 aa3.61□□□□□ -1.83
NDE1-207ENST00000573203 KRTAP2-3P0C7H8 128 aa3.58□□□□□ -1.84
NDE1-207ENST00000573203 KRTAP2-4Q9BYR9 128 aa3.58□□□□□ -1.84
NDE1-207ENST00000573203 PP632Q6XCG6 107 aa3.57□□□□□ -1.84
NDE1-207ENST00000573203 TNP1P09430 55 aa3.55□□□□□ -1.84
NDE1-207ENST00000573203 SPRR2DP22532 72 aa3.52□□□□□ -1.85
NDE1-207ENST00000573203 KRTAP2-1Q9BYU5 128 aa3.47□□□□□ -1.85
NDE1-207ENST00000573203 LCE1FQ5T754 118 aa3.45□□□□□ -1.86
NDE1-207ENST00000573203 KRTAP19-7Q3SYF9 63 aa3.39□□□□□ -1.87
NDE1-207ENST00000573203 MT1EP04732 61 aa3.37□□□□□ -1.87
NDE1-207ENST00000573203 KRTAP9-6A8MVA2 160 aa3.35□□□□□ -1.87
NDE1-207ENST00000573203 KRTAP19-3Q7Z4W3 81 aa3.35□□□□□ -1.87
NDE1-207ENST00000573203 KRTAP19-5Q3LI72 72 aa3.33□□□□□ -1.88
NDE1-207ENST00000573203 LCE3AQ5TA76 89 aa3.33□□□□□ -1.88
NDE1-207ENST00000573203 KRTAP5-1Q6L8H4 278 aa3.27□□□□□ -1.89
NDE1-207ENST00000573203 DSTQ03001 7570 aaKnown RBP3.27□□□□□ -1.89
NDE1-207ENST00000573203 GPR98Q8WXG9 6306 aa3.26□□□□□ -1.89
NDE1-207ENST00000573203 NDUFAF8A1L188 74 aa3.26□□□□□ -1.89
NDE1-207ENST00000573203 MT1GP13640 62 aa3.26□□□□□ -1.89
NDE1-207ENST00000573203 KRTAP12-3P60328 96 aa3.23□□□□□ -1.89
NDE1-207ENST00000573203 MT1LQ93083 61 aa3.23□□□□□ -1.89
NDE1-207ENST00000573203 LCE3CQ5T5A8 94 aa3.22□□□□□ -1.89
NDE1-207ENST00000573203 MT1MQ8N339 61 aa3.21□□□□□ -1.9
NDE1-207ENST00000573203 SPRR5A0A1B0GTR4 108 aa3.19□□□□□ -1.9
NDE1-207ENST00000573203 KRTAP5-4Q6L8H1 288 aa3.15□□□□□ -1.91
NDE1-207ENST00000573203 KRTAP4-3Q9BYR4 195 aa3.13□□□□□ -1.91
NDE1-207ENST00000573203 KRTAP4-4Q9BYR3 166 aa3.1□□□□□ -1.91
NDE1-207ENST00000573203 MT4P47944 62 aa3.08□□□□□ -1.92
NDE1-207ENST00000573203 LUZP6Q538Z0 58 aa3.07□□□□□ -1.92
NDE1-207ENST00000573203 HMCN1Q96RW7 5635 aa3.04□□□□□ -1.92
NDE1-207ENST00000573203 AHNAK2Q8IVF2 5795 aa2.94□□□□□ -1.94
NDE1-207ENST00000573203 LCE3EQ5T5B0 92 aa2.92□□□□□ -1.94
NDE1-207ENST00000573203 KRTAP5-5Q701N2 237 aaPredicted RBP2.92□□□□□ -1.94
NDE1-207ENST00000573203 KRTAP12-4P60329 112 aa2.88□□□□□ -1.95
NDE1-207ENST00000573203 KRTAP20-2Q3LI61 65 aa2.87□□□□□ -1.95
NDE1-207ENST00000573203 KRTAP5-10Q6L8G5 202 aa2.85□□□□□ -1.95
NDE1-207ENST00000573203 OBSCNQ5VST9 7968 aa2.83□□□□□ -1.96
NDE1-207ENST00000573203 SYNE1Q8NF91 8797 aaKnown RBP2.8□□□□□ -1.96
NDE1-207ENST00000573203 MT1AP04731 61 aa2.74□□□□□ -1.97
NDE1-207ENST00000573203 KRTAP5-7Q6L8G8 165 aa2.74□□□□□ -1.97
NDE1-207ENST00000573203 KRTAP6-1Q3LI64 71 aa2.73□□□□□ -1.97
NDE1-207ENST00000573203 KRTAP5-2Q701N4 177 aa2.66□□□□□ -1.98
NDE1-207ENST00000573203 KRTAP6-2Q3LI66 62 aa2.61□□□□□ -1.99
NDE1-207ENST00000573203 INE1O15225 51 aa2.59□□□□□ -1.99
NDE1-207ENST00000573203 AHNAKQ09666 5890 aaKnown RBP2.52□□□□□ -2.01
NDE1-207ENST00000573203 KRTAP5-8O75690 187 aa2.52□□□□□ -2.01
NDE1-207ENST00000573203 LCE1CQ5T751 118 aa2.52□□□□□ -2.01
NDE1-207ENST00000573203 LCE1BQ5T7P3 118 aa2.52□□□□□ -2.01
NDE1-207ENST00000573203 MUC5BQ9HC84 5762 aaPredicted RBP2.4□□□□□ -2.02
NDE1-207ENST00000573203 MUC5ACP98088 5654 aa2.4□□□□□ -2.03
NDE1-207ENST00000573203 LCE3DQ9BYE3 92 aa2.33□□□□□ -2.04
NDE1-207ENST00000573203 MUC19Q7Z5P9 8384 aa2□□□□□ -2.09
NDE1-207ENST00000573203 PRM1P04553 51 aa1.94□□□□□ -2.1
NDE1-207ENST00000573203 KRTAP21-2Q3LI59 83 aa1.78□□□□□ -2.12
NDE1-207ENST00000573203 PHGR1C9JFL3 82 aa1.68□□□□□ -2.14
NDE1-207ENST00000573203 KRTAP21-1Q3LI58 79 aa1.27□□□□□ -2.21
NDE1-207ENST00000573203 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 97.4 ms