RNA–Protein interactions for RNA: ENST00000571351.1

TNFRSF12A-203, Transcript of TNF receptor superfamily member 12A, humanhuman

TSL 2

Gene TNFRSF12A, Length 1,678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF12A-203ENST00000571351 MT1EP04732 61 aa7.51□□□□□ -1.21
TNFRSF12A-203ENST00000571351 KRTAP15-1Q3LI76 137 aa7.44□□□□□ -1.22
TNFRSF12A-203ENST00000571351 NEBP20929 6669 aa7.38□□□□□ -1.23
TNFRSF12A-203ENST00000571351 LCE1AQ5T7P2 110 aa7.37□□□□□ -1.23
TNFRSF12A-203ENST00000571351 A0A0A0MQY5 61 aa7.34□□□□□ -1.23
TNFRSF12A-203ENST00000571351 SPRR2EP22531 72 aa7.32□□□□□ -1.24
TNFRSF12A-203ENST00000571351 SPRR2BP35325 72 aa7.32□□□□□ -1.24
TNFRSF12A-203ENST00000571351 SPRR2AP35326 72 aa7.32□□□□□ -1.24
TNFRSF12A-203ENST00000571351 MT1LQ93083 61 aa7.3□□□□□ -1.24
TNFRSF12A-203ENST00000571351 KRTAP19-3Q7Z4W3 81 aa7.28□□□□□ -1.24
TNFRSF12A-203ENST00000571351 KRTAP19-4Q3LI73 84 aa7.25□□□□□ -1.25
TNFRSF12A-203ENST00000571351 LCE5AQ5TCM9 118 aa7.22□□□□□ -1.25
TNFRSF12A-203ENST00000571351 MT1GP13640 62 aa7.17□□□□□ -1.26
TNFRSF12A-203ENST00000571351 LCE3CQ5T5A8 94 aa7.1□□□□□ -1.27
TNFRSF12A-203ENST00000571351 MT1MQ8N339 61 aa7.09□□□□□ -1.27
TNFRSF12A-203ENST00000571351 SPRR2DP22532 72 aa7.05□□□□□ -1.28
TNFRSF12A-203ENST00000571351 KRTAP4-7Q9BYR0 210 aa7.05□□□□□ -1.28
TNFRSF12A-203ENST00000571351 SPRR5A0A1B0GTR4 108 aa7.03□□□□□ -1.28
TNFRSF12A-203ENST00000571351 DSTQ03001 7570 aaKnown RBP7.01□□□□□ -1.29
TNFRSF12A-203ENST00000571351 KRTAP4-3Q9BYR4 195 aa6.96□□□□□ -1.29
TNFRSF12A-203ENST00000571351 KRTAP20-1Q3LI63 56 aa6.95□□□□□ -1.3
TNFRSF12A-203ENST00000571351 LUZP6Q538Z0 58 aa6.88□□□□□ -1.31
TNFRSF12A-203ENST00000571351 LCE3BQ5TA77 95 aa6.81□□□□□ -1.32
TNFRSF12A-203ENST00000571351 KRTAP2-3P0C7H8 128 aa6.8□□□□□ -1.32
TNFRSF12A-203ENST00000571351 KRTAP2-4Q9BYR9 128 aa6.8□□□□□ -1.32
TNFRSF12A-203ENST00000571351 NDUFAF8A1L188 74 aa6.78□□□□□ -1.32
TNFRSF12A-203ENST00000571351 KRTAP9-6A8MVA2 160 aa6.7□□□□□ -1.34
TNFRSF12A-203ENST00000571351 LOC100996750A0A140TA64 210 aa6.64□□□□□ -1.35
TNFRSF12A-203ENST00000571351 KRTAP2-2Q9BYT5 123 aa6.62□□□□□ -1.35
TNFRSF12A-203ENST00000571351 KRTAP2-1Q9BYU5 128 aa6.62□□□□□ -1.35
TNFRSF12A-203ENST00000571351 KRTAP5-5Q701N2 237 aaPredicted RBP6.47□□□□□ -1.37
TNFRSF12A-203ENST00000571351 KRTAP5-4Q6L8H1 288 aa6.35□□□□□ -1.39
TNFRSF12A-203ENST00000571351 LCE4AQ5TA78 99 aa6.26□□□□□ -1.41
TNFRSF12A-203ENST00000571351 SYNE1Q8NF91 8797 aaKnown RBP6.25□□□□□ -1.41
TNFRSF12A-203ENST00000571351 KRTAP4-9Q9BYQ8 210 aa6.2□□□□□ -1.42
TNFRSF12A-203ENST00000571351 MT1AP04731 61 aa6.2□□□□□ -1.42
TNFRSF12A-203ENST00000571351 KRTAP6-1Q3LI64 71 aa6.17□□□□□ -1.42
TNFRSF12A-203ENST00000571351 MT4P47944 62 aa6.14□□□□□ -1.43
TNFRSF12A-203ENST00000571351 HMCN1Q96RW7 5635 aa6.14□□□□□ -1.43
TNFRSF12A-203ENST00000571351 LCE1DQ5T752 114 aa6.13□□□□□ -1.43
TNFRSF12A-203ENST00000571351 KRTAP4-6Q9BYQ5 205 aa6.1□□□□□ -1.43
TNFRSF12A-203ENST00000571351 KRTAP12-4P60329 112 aa6.01□□□□□ -1.45
TNFRSF12A-203ENST00000571351 KRTAP20-2Q3LI61 65 aa5.94□□□□□ -1.46
TNFRSF12A-203ENST00000571351 KRTAP9-4Q9BYQ2 154 aa5.92□□□□□ -1.46
TNFRSF12A-203ENST00000571351 GPR98Q8WXG9 6306 aa5.77□□□□□ -1.49
TNFRSF12A-203ENST00000571351 KRTAP5-3Q6L8H2 238 aa5.75□□□□□ -1.49
TNFRSF12A-203ENST00000571351 KRTAP6-2Q3LI66 62 aa5.73□□□□□ -1.49
TNFRSF12A-203ENST00000571351 KRTAP5-2Q701N4 177 aa5.7□□□□□ -1.5
TNFRSF12A-203ENST00000571351 AHNAK2Q8IVF2 5795 aa5.68□□□□□ -1.5
TNFRSF12A-203ENST00000571351 MT3P25713 68 aa5.62□□□□□ -1.51
TNFRSF12A-203ENST00000571351 INE1O15225 51 aa5.56□□□□□ -1.52
TNFRSF12A-203ENST00000571351 KRTAP5-10Q6L8G5 202 aa5.48□□□□□ -1.53
TNFRSF12A-203ENST00000571351 OBSCNQ5VST9 7968 aa5.42□□□□□ -1.54
TNFRSF12A-203ENST00000571351 LCE3DQ9BYE3 92 aa5.31□□□□□ -1.56
TNFRSF12A-203ENST00000571351 KRTAP4-11Q9BYQ6 195 aa5.23□□□□□ -1.57
TNFRSF12A-203ENST00000571351 KRTAP5-7Q6L8G8 165 aa5.2□□□□□ -1.58
TNFRSF12A-203ENST00000571351 LCE3EQ5T5B0 92 aa5.15□□□□□ -1.58
TNFRSF12A-203ENST00000571351 KRTAP5-8O75690 187 aa5.07□□□□□ -1.6
TNFRSF12A-203ENST00000571351 KRTAP5-1Q6L8H4 278 aa4.99□□□□□ -1.61
TNFRSF12A-203ENST00000571351 LCE1EQ5T753 118 aa4.98□□□□□ -1.61
TNFRSF12A-203ENST00000571351 KRTAP9-9Q9BYP9 154 aa4.89□□□□□ -1.63
TNFRSF12A-203ENST00000571351 MUC5ACP98088 5654 aa4.89□□□□□ -1.63
TNFRSF12A-203ENST00000571351 KRTAP4-2Q9BYR5 136 aa4.7□□□□□ -1.66
TNFRSF12A-203ENST00000571351 MUC5BQ9HC84 5762 aaPredicted RBP4.68□□□□□ -1.66
TNFRSF12A-203ENST00000571351 LCE1BQ5T7P3 118 aa4.65□□□□□ -1.66
TNFRSF12A-203ENST00000571351 LCE1CQ5T751 118 aa4.64□□□□□ -1.67
TNFRSF12A-203ENST00000571351 AHNAKQ09666 5890 aaKnown RBP4.57□□□□□ -1.68
TNFRSF12A-203ENST00000571351 KRTAP4-12Q9BQ66 201 aa4.55□□□□□ -1.68
TNFRSF12A-203ENST00000571351 PRM1P04553 51 aa4.48□□□□□ -1.69
TNFRSF12A-203ENST00000571351 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.32□□□□□ -1.72
TNFRSF12A-203ENST00000571351 LCE1FQ5T754 118 aa4.19□□□□□ -1.74
TNFRSF12A-203ENST00000571351 KRTAP5-11Q6L8G4 156 aa4.14□□□□□ -1.75
TNFRSF12A-203ENST00000571351 KRTAP21-2Q3LI59 83 aa4.06□□□□□ -1.76
TNFRSF12A-203ENST00000571351 KRTAP4-4Q9BYR3 166 aa3.62□□□□□ -1.83
TNFRSF12A-203ENST00000571351 PHGR1C9JFL3 82 aa3.56□□□□□ -1.84
TNFRSF12A-203ENST00000571351 MUC19Q7Z5P9 8384 aa3.27□□□□□ -1.89
TNFRSF12A-203ENST00000571351 KRTAP21-1Q3LI58 79 aa2.73□□□□□ -1.97
TNFRSF12A-203ENST00000571351 MUC16Q8WXI7 14507 aa2.27□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 144.1 ms