RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 KRTAP2-1Q9BYU5 128 aa4.85□□□□□ -1.63
TVP23B-204ENST00000571018 SPRR2DP22532 72 aa4.83□□□□□ -1.64
TVP23B-204ENST00000571018 A8MU10 97 aa4.82□□□□□ -1.64
TVP23B-204ENST00000571018 TMEM258P61165 79 aa4.82□□□□□ -1.64
TVP23B-204ENST00000571018 PRR15LQ9BU68 103 aa4.81□□□□□ -1.64
TVP23B-204ENST00000571018 LINC01558Q9Y6Z2 57 aa4.8□□□□□ -1.64
TVP23B-204ENST00000571018 KRTAP19-7Q3SYF9 63 aa4.76□□□□□ -1.65
TVP23B-204ENST00000571018 MT1EP04732 61 aa4.71□□□□□ -1.66
TVP23B-204ENST00000571018 C10orf95Q9H7T3 257 aa4.68□□□□□ -1.66
TVP23B-204ENST00000571018 UQCR11O14957 56 aa4.67□□□□□ -1.66
TVP23B-204ENST00000571018 KRTAP19-3Q7Z4W3 81 aa4.66□□□□□ -1.66
TVP23B-204ENST00000571018 TNP1P09430 55 aa4.65□□□□□ -1.67
TVP23B-204ENST00000571018 KRTAP19-5Q3LI72 72 aa4.65□□□□□ -1.67
TVP23B-204ENST00000571018 PRAC1Q96KF2 57 aa4.65□□□□□ -1.67
TVP23B-204ENST00000571018 LCE3AQ5TA76 89 aa4.59□□□□□ -1.67
TVP23B-204ENST00000571018 MT1GP13640 62 aa4.57□□□□□ -1.68
TVP23B-204ENST00000571018 MIR22HGQ0VDD5 57 aa4.56□□□□□ -1.68
TVP23B-204ENST00000571018 LCE1EQ5T753 118 aa4.56□□□□□ -1.68
TVP23B-204ENST00000571018 V9GYY9 64 aa4.56□□□□□ -1.68
TVP23B-204ENST00000571018 LCE1FQ5T754 118 aa4.55□□□□□ -1.68
TVP23B-204ENST00000571018 Q1T7F1 81 aa4.53□□□□□ -1.68
TVP23B-204ENST00000571018 NDUFAF8A1L188 74 aa4.52□□□□□ -1.69
TVP23B-204ENST00000571018 RPS28P62857 69 aaKnown RBP4.52□□□□□ -1.69
TVP23B-204ENST00000571018 PP632Q6XCG6 107 aa4.52□□□□□ -1.69
TVP23B-204ENST00000571018 PSPHP1O15172 72 aa4.51□□□□□ -1.69
TVP23B-204ENST00000571018 MT1LQ93083 61 aa4.51□□□□□ -1.69
TVP23B-204ENST00000571018 MT1MQ8N339 61 aa4.48□□□□□ -1.69
TVP23B-204ENST00000571018 GPR98Q8WXG9 6306 aa4.48□□□□□ -1.69
TVP23B-204ENST00000571018 K7ERS5 55 aa4.46□□□□□ -1.7
TVP23B-204ENST00000571018 KRTAP5-11Q6L8G4 156 aa4.46□□□□□ -1.7
TVP23B-204ENST00000571018 DSTQ03001 7570 aaKnown RBP4.46□□□□□ -1.7
TVP23B-204ENST00000571018 KRTAP25-1Q3LHN0 102 aa4.43□□□□□ -1.7
TVP23B-204ENST00000571018 KRTAP12-3P60328 96 aa4.42□□□□□ -1.7
TVP23B-204ENST00000571018 A6NED7 52 aa4.36□□□□□ -1.71
TVP23B-204ENST00000571018 KRTAP4-3Q9BYR4 195 aa4.36□□□□□ -1.71
TVP23B-204ENST00000571018 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.3□□□□□ -1.72
TVP23B-204ENST00000571018 LCE3CQ5T5A8 94 aa4.24□□□□□ -1.73
TVP23B-204ENST00000571018 KRTAP5-4Q6L8H1 288 aa4.24□□□□□ -1.73
TVP23B-204ENST00000571018 CDC42SE1Q9NRR8 79 aa4.24□□□□□ -1.73
TVP23B-204ENST00000571018 MT4P47944 62 aa4.21□□□□□ -1.74
TVP23B-204ENST00000571018 ROMO1P60602 79 aa4.18□□□□□ -1.74
TVP23B-204ENST00000571018 HMCN1Q96RW7 5635 aa4.14□□□□□ -1.75
TVP23B-204ENST00000571018 AHNAK2Q8IVF2 5795 aa4.13□□□□□ -1.75
TVP23B-204ENST00000571018 PRO0628Q9UI54 55 aa4.12□□□□□ -1.75
TVP23B-204ENST00000571018 KRTAP9-6A8MVA2 160 aa4.11□□□□□ -1.75
TVP23B-204ENST00000571018 KRTAP5-5Q701N2 237 aaPredicted RBP4.11□□□□□ -1.75
TVP23B-204ENST00000571018 KRTAP5-10Q6L8G5 202 aa4.07□□□□□ -1.76
TVP23B-204ENST00000571018 BRK1Q8WUW1 75 aa4.06□□□□□ -1.76
TVP23B-204ENST00000571018 KRTAP5-7Q6L8G8 165 aa3.99□□□□□ -1.77
TVP23B-204ENST00000571018 SPRR5A0A1B0GTR4 108 aa3.98□□□□□ -1.77
TVP23B-204ENST00000571018 KRTAP20-2Q3LI61 65 aa3.98□□□□□ -1.77
TVP23B-204ENST00000571018 KRTAP12-4P60329 112 aa3.97□□□□□ -1.77
TVP23B-204ENST00000571018 SYNE1Q8NF91 8797 aaKnown RBP3.86□□□□□ -1.79
TVP23B-204ENST00000571018 LCE3EQ5T5B0 92 aa3.86□□□□□ -1.79
TVP23B-204ENST00000571018 MT1AP04731 61 aa3.85□□□□□ -1.79
TVP23B-204ENST00000571018 PMAIP1Q13794 54 aa3.83□□□□□ -1.8
TVP23B-204ENST00000571018 KRTAP6-1Q3LI64 71 aa3.81□□□□□ -1.8
TVP23B-204ENST00000571018 KTN1-AS1Q86SY8 53 aa3.79□□□□□ -1.8
TVP23B-204ENST00000571018 KRTAP5-1Q6L8H4 278 aa3.74□□□□□ -1.81
TVP23B-204ENST00000571018 KRTAP5-2Q701N4 177 aa3.73□□□□□ -1.81
TVP23B-204ENST00000571018 KRTAP6-2Q3LI66 62 aa3.62□□□□□ -1.83
TVP23B-204ENST00000571018 KRTAP4-4Q9BYR3 166 aa3.54□□□□□ -1.84
TVP23B-204ENST00000571018 KRTAP5-8O75690 187 aa3.5□□□□□ -1.85
TVP23B-204ENST00000571018 AHNAKQ09666 5890 aaKnown RBP3.45□□□□□ -1.86
TVP23B-204ENST00000571018 OBSCNQ5VST9 7968 aa3.43□□□□□ -1.86
TVP23B-204ENST00000571018 MUC5ACP98088 5654 aa3.43□□□□□ -1.86
TVP23B-204ENST00000571018 MUC5BQ9HC84 5762 aaPredicted RBP3.42□□□□□ -1.86
TVP23B-204ENST00000571018 LCE3DQ9BYE3 92 aa3.18□□□□□ -1.9
TVP23B-204ENST00000571018 LCE1CQ5T751 118 aa3.02□□□□□ -1.93
TVP23B-204ENST00000571018 LCE1BQ5T7P3 118 aa3.02□□□□□ -1.93
TVP23B-204ENST00000571018 LUZP6Q538Z0 58 aa2.9□□□□□ -1.95
TVP23B-204ENST00000571018 KRTAP21-2Q3LI59 83 aa2.52□□□□□ -2.01
TVP23B-204ENST00000571018 INE1O15225 51 aa2.46□□□□□ -2.02
TVP23B-204ENST00000571018 MUC19Q7Z5P9 8384 aa2.43□□□□□ -2.02
TVP23B-204ENST00000571018 PHGR1C9JFL3 82 aa2.4□□□□□ -2.03
TVP23B-204ENST00000571018 PRM1P04553 51 aa2.13□□□□□ -2.07
TVP23B-204ENST00000571018 KRTAP21-1Q3LI58 79 aa1.86□□□□□ -2.11
TVP23B-204ENST00000571018 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 345.1 ms