RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 KRTAP19-5Q3LI72 72 aa6.83□□□□□ -1.32
SCARF1-204ENST00000570902 KRTAP5-10Q6L8G5 202 aa6.83□□□□□ -1.32
SCARF1-204ENST00000570902 MT1MQ8N339 61 aa6.79□□□□□ -1.32
SCARF1-204ENST00000570902 RPS28P62857 69 aaKnown RBP6.76□□□□□ -1.33
SCARF1-204ENST00000570902 KRTAP5-4Q6L8H1 288 aa6.75□□□□□ -1.33
SCARF1-204ENST00000570902 MT1LQ93083 61 aa6.7□□□□□ -1.34
SCARF1-204ENST00000570902 KRTAP4-6Q9BYQ5 205 aa6.69□□□□□ -1.34
SCARF1-204ENST00000570902 UQCR11O14957 56 aa6.65□□□□□ -1.34
SCARF1-204ENST00000570902 KRTAP5-7Q6L8G8 165 aa6.65□□□□□ -1.34
SCARF1-204ENST00000570902 C10orf95Q9H7T3 257 aa6.63□□□□□ -1.35
SCARF1-204ENST00000570902 KRTAP4-3Q9BYR4 195 aa6.61□□□□□ -1.35
SCARF1-204ENST00000570902 TNP1P09430 55 aa6.57□□□□□ -1.36
SCARF1-204ENST00000570902 KRTAP5-3Q6L8H2 238 aa6.56□□□□□ -1.36
SCARF1-204ENST00000570902 MIR22HGQ0VDD5 57 aa6.52□□□□□ -1.37
SCARF1-204ENST00000570902 PSPHP1O15172 72 aa6.51□□□□□ -1.37
SCARF1-204ENST00000570902 LCE3AQ5TA76 89 aa6.51□□□□□ -1.37
SCARF1-204ENST00000570902 V9GYY9 64 aa6.51□□□□□ -1.37
SCARF1-204ENST00000570902 Q1T7F1 81 aa6.49□□□□□ -1.37
SCARF1-204ENST00000570902 KRTAP20-2Q3LI61 65 aa6.41□□□□□ -1.38
SCARF1-204ENST00000570902 SPRR5A0A1B0GTR4 108 aa6.35□□□□□ -1.39
SCARF1-204ENST00000570902 K7ERS5 55 aa6.35□□□□□ -1.39
SCARF1-204ENST00000570902 KRTAP4-7Q9BYR0 210 aa6.32□□□□□ -1.4
SCARF1-204ENST00000570902 A6NED7 52 aa6.28□□□□□ -1.4
SCARF1-204ENST00000570902 KRTAP12-4P60329 112 aa6.27□□□□□ -1.41
SCARF1-204ENST00000570902 KRTAP5-5Q701N2 237 aaPredicted RBP6.27□□□□□ -1.41
SCARF1-204ENST00000570902 KRTAP12-3P60328 96 aa6.26□□□□□ -1.41
SCARF1-204ENST00000570902 KRTAP25-1Q3LHN0 102 aa6.26□□□□□ -1.41
SCARF1-204ENST00000570902 BRK1Q8WUW1 75 aa6.13□□□□□ -1.43
SCARF1-204ENST00000570902 SYNE1Q8NF91 8797 aaKnown RBP6.08□□□□□ -1.44
SCARF1-204ENST00000570902 PRO0628Q9UI54 55 aa6.07□□□□□ -1.44
SCARF1-204ENST00000570902 CDC42SE1Q9NRR8 79 aa6.04□□□□□ -1.44
SCARF1-204ENST00000570902 KRTAP23-1A1A580 65 aa6.02□□□□□ -1.45
SCARF1-204ENST00000570902 LOC100996750A0A140TA64 210 aa6.01□□□□□ -1.45
SCARF1-204ENST00000570902 ROMO1P60602 79 aa5.97□□□□□ -1.45
SCARF1-204ENST00000570902 KRTAP4-11Q9BYQ6 195 aa5.97□□□□□ -1.45
SCARF1-204ENST00000570902 SVIPQ8NHG7 77 aa5.9□□□□□ -1.46
SCARF1-204ENST00000570902 KRTAP19-4Q3LI73 84 aa5.88□□□□□ -1.47
SCARF1-204ENST00000570902 KRTAP15-1Q3LI76 137 aa5.88□□□□□ -1.47
SCARF1-204ENST00000570902 KRTAP5-2Q701N4 177 aa5.84□□□□□ -1.47
SCARF1-204ENST00000570902 PMAIP1Q13794 54 aa5.81□□□□□ -1.48
SCARF1-204ENST00000570902 AHNAKQ09666 5890 aaKnown RBP5.79□□□□□ -1.48
SCARF1-204ENST00000570902 MUC5ACP98088 5654 aa5.78□□□□□ -1.48
SCARF1-204ENST00000570902 KRTAP5-8O75690 187 aa5.77□□□□□ -1.49
SCARF1-204ENST00000570902 LCE3CQ5T5A8 94 aa5.77□□□□□ -1.49
SCARF1-204ENST00000570902 MUC5BQ9HC84 5762 aaPredicted RBP5.75□□□□□ -1.49
SCARF1-204ENST00000570902 MT1AP04731 61 aa5.7□□□□□ -1.5
SCARF1-204ENST00000570902 KRTAP6-1Q3LI64 71 aa5.68□□□□□ -1.5
SCARF1-204ENST00000570902 KTN1-AS1Q86SY8 53 aa5.61□□□□□ -1.51
SCARF1-204ENST00000570902 KRTAP9-9Q9BYP9 154 aa5.59□□□□□ -1.51
SCARF1-204ENST00000570902 KRTAP9-4Q9BYQ2 154 aa5.57□□□□□ -1.52
SCARF1-204ENST00000570902 OBSCNQ5VST9 7968 aa5.56□□□□□ -1.52
SCARF1-204ENST00000570902 KRTAP6-2Q3LI66 62 aa5.53□□□□□ -1.52
SCARF1-204ENST00000570902 KRTAP9-6A8MVA2 160 aa5.45□□□□□ -1.54
SCARF1-204ENST00000570902 PRAC1Q96KF2 57 aa5.37□□□□□ -1.55
SCARF1-204ENST00000570902 KRTAP5-1Q6L8H4 278 aa5.31□□□□□ -1.56
SCARF1-204ENST00000570902 MT3P25713 68 aa5.26□□□□□ -1.57
SCARF1-204ENST00000570902 LCE1EQ5T753 118 aa4.95□□□□□ -1.62
SCARF1-204ENST00000570902 LCE1BQ5T7P3 118 aa4.68□□□□□ -1.66
SCARF1-204ENST00000570902 KRTAP4-2Q9BYR5 136 aa4.68□□□□□ -1.66
SCARF1-204ENST00000570902 LCE1CQ5T751 118 aa4.59□□□□□ -1.67
SCARF1-204ENST00000570902 LUZP6Q538Z0 58 aa4.46□□□□□ -1.7
SCARF1-204ENST00000570902 KRTAP4-12Q9BQ66 201 aa4.4□□□□□ -1.71
SCARF1-204ENST00000570902 NDUFAF8A1L188 74 aa4.39□□□□□ -1.71
SCARF1-204ENST00000570902 KRTAP5-11Q6L8G4 156 aa4.22□□□□□ -1.73
SCARF1-204ENST00000570902 LCE1FQ5T754 118 aa4.21□□□□□ -1.74
SCARF1-204ENST00000570902 LCE3DQ9BYE3 92 aa4.18□□□□□ -1.74
SCARF1-204ENST00000570902 H3BS24 57 aa4.11□□□□□ -1.75
SCARF1-204ENST00000570902 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.11□□□□□ -1.75
SCARF1-204ENST00000570902 PHGR1C9JFL3 82 aa4.01□□□□□ -1.77
SCARF1-204ENST00000570902 A0A0A0MQY5 61 aa3.98□□□□□ -1.77
SCARF1-204ENST00000570902 LCE3EQ5T5B0 92 aa3.96□□□□□ -1.78
SCARF1-204ENST00000570902 KRTAP21-2Q3LI59 83 aa3.75□□□□□ -1.81
SCARF1-204ENST00000570902 INE1O15225 51 aa3.68□□□□□ -1.82
SCARF1-204ENST00000570902 KRTAP4-4Q9BYR3 166 aa3.49□□□□□ -1.85
SCARF1-204ENST00000570902 MUC19Q7Z5P9 8384 aa3.45□□□□□ -1.86
SCARF1-204ENST00000570902 PRM1P04553 51 aa3.07□□□□□ -1.92
SCARF1-204ENST00000570902 KRTAP21-1Q3LI58 79 aa3.07□□□□□ -1.92
SCARF1-204ENST00000570902 MUC16Q8WXI7 14507 aa2.45□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 32.4 ms