RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 SPTSSBQ8NFR3 76 aa2.52□□□□□ -2.01
SMG6-204ENST00000570606 PRO0628Q9UI54 55 aa2.52□□□□□ -2.01
SMG6-204ENST00000570606 SMIM26A0A096LP01 95 aa2.51□□□□□ -2.01
SMG6-204ENST00000570606 ACYP2P14621 99 aa2.5□□□□□ -2.01
SMG6-204ENST00000570606 DSTQ03001 7570 aaKnown RBP2.49□□□□□ -2.01
SMG6-204ENST00000570606 CHKB-CPT1BH3BT56 60 aa2.49□□□□□ -2.01
SMG6-204ENST00000570606 H7BZZ5 65 aa2.48□□□□□ -2.01
SMG6-204ENST00000570606 KRTAP5-1Q6L8H4 278 aa2.48□□□□□ -2.01
SMG6-204ENST00000570606 SERP1Q9Y6X1 66 aa2.48□□□□□ -2.01
SMG6-204ENST00000570606 ATP5EP56381 51 aaPredicted RBP2.46□□□□□ -2.02
SMG6-204ENST00000570606 KRTAP5-4Q6L8H1 288 aa2.45□□□□□ -2.02
SMG6-204ENST00000570606 PSPHP1O15172 72 aa2.43□□□□□ -2.02
SMG6-204ENST00000570606 KRTAP19-3Q7Z4W3 81 aa2.43□□□□□ -2.02
SMG6-204ENST00000570606 MT1EP04732 61 aa2.42□□□□□ -2.02
SMG6-204ENST00000570606 KRTAP13-4Q3LI77 160 aa2.42□□□□□ -2.02
SMG6-204ENST00000570606 KRTAP19-7Q3SYF9 63 aa2.42□□□□□ -2.02
SMG6-204ENST00000570606 KRTAP4-4Q9BYR3 166 aa2.41□□□□□ -2.02
SMG6-204ENST00000570606 HMCN1Q96RW7 5635 aa2.41□□□□□ -2.02
SMG6-204ENST00000570606 SPANXA2-OT1Q8N9U9 137 aa2.39□□□□□ -2.03
SMG6-204ENST00000570606 A0A0D9SG42 100 aa2.38□□□□□ -2.03
SMG6-204ENST00000570606 AHNAK2Q8IVF2 5795 aa2.37□□□□□ -2.03
SMG6-204ENST00000570606 MT4P47944 62 aa2.36□□□□□ -2.03
SMG6-204ENST00000570606 PMAIP1Q13794 54 aa2.36□□□□□ -2.03
SMG6-204ENST00000570606 PP632Q6XCG6 107 aa2.36□□□□□ -2.03
SMG6-204ENST00000570606 SPRR5A0A1B0GTR4 108 aa2.35□□□□□ -2.03
SMG6-204ENST00000570606 Q1T7F1 81 aa2.35□□□□□ -2.03
SMG6-204ENST00000570606 KRTAP19-5Q3LI72 72 aa2.35□□□□□ -2.03
SMG6-204ENST00000570606 COA5Q86WW8 74 aa2.35□□□□□ -2.03
SMG6-204ENST00000570606 MT1GP13640 62 aa2.34□□□□□ -2.03
SMG6-204ENST00000570606 LUZP6Q538Z0 58 aa2.34□□□□□ -2.03
SMG6-204ENST00000570606 SPINT4Q6UDR6 99 aa2.34□□□□□ -2.03
SMG6-204ENST00000570606 BRK1Q8WUW1 75 aa2.34□□□□□ -2.03
SMG6-204ENST00000570606 MT1MQ8N339 61 aa2.32□□□□□ -2.04
SMG6-204ENST00000570606 SPATA8Q6RVD6 105 aa2.31□□□□□ -2.04
SMG6-204ENST00000570606 PRR15LQ9BU68 103 aa2.31□□□□□ -2.04
SMG6-204ENST00000570606 LCE3DQ9BYE3 92 aa2.31□□□□□ -2.04
SMG6-204ENST00000570606 MT1LQ93083 61 aa2.29□□□□□ -2.04
SMG6-204ENST00000570606 A0A1B0GU33 70 aa2.28□□□□□ -2.04
SMG6-204ENST00000570606 KRTAP12-1P59990 96 aa2.28□□□□□ -2.04
SMG6-204ENST00000570606 KTN1-AS1Q86SY8 53 aa2.28□□□□□ -2.04
SMG6-204ENST00000570606 KRTAP5-10Q6L8G5 202 aa2.26□□□□□ -2.05
SMG6-204ENST00000570606 KRTAP4-3Q9BYR4 195 aa2.26□□□□□ -2.05
SMG6-204ENST00000570606 C10orf95Q9H7T3 257 aa2.26□□□□□ -2.05
SMG6-204ENST00000570606 LINC01558Q9Y6Z2 57 aa2.26□□□□□ -2.05
SMG6-204ENST00000570606 A6NED7 52 aa2.25□□□□□ -2.05
SMG6-204ENST00000570606 LCE3AQ5TA76 89 aa2.25□□□□□ -2.05
SMG6-204ENST00000570606 A0A1B0GU69 56 aa2.23□□□□□ -2.05
SMG6-204ENST00000570606 TNP1P09430 55 aa2.23□□□□□ -2.05
SMG6-204ENST00000570606 CDC42SE1Q9NRR8 79 aa2.22□□□□□ -2.05
SMG6-204ENST00000570606 K7ERS5 55 aa2.2□□□□□ -2.06
SMG6-204ENST00000570606 KRTAP5-7Q6L8G8 165 aa2.19□□□□□ -2.06
SMG6-204ENST00000570606 MIR22HGQ0VDD5 57 aa2.17□□□□□ -2.06
SMG6-204ENST00000570606 UQCR11O14957 56 aa2.16□□□□□ -2.06
SMG6-204ENST00000570606 KRTAP12-3P60328 96 aa2.16□□□□□ -2.06
SMG6-204ENST00000570606 KRTAP20-2Q3LI61 65 aa2.16□□□□□ -2.06
SMG6-204ENST00000570606 KRTAP12-4P60329 112 aa2.13□□□□□ -2.07
SMG6-204ENST00000570606 KRTAP5-5Q701N2 237 aaPredicted RBP2.11□□□□□ -2.07
SMG6-204ENST00000570606 OBSCNQ5VST9 7968 aa2.1□□□□□ -2.07
SMG6-204ENST00000570606 KRTAP5-2Q701N4 177 aa2.09□□□□□ -2.07
SMG6-204ENST00000570606 KRTAP25-1Q3LHN0 102 aa2.07□□□□□ -2.08
SMG6-204ENST00000570606 SYNE1Q8NF91 8797 aaKnown RBP2.05□□□□□ -2.08
SMG6-204ENST00000570606 AHNAKQ09666 5890 aaKnown RBP1.99□□□□□ -2.09
SMG6-204ENST00000570606 MUC5BQ9HC84 5762 aaPredicted RBP1.99□□□□□ -2.09
SMG6-204ENST00000570606 ROMO1P60602 79 aa1.97□□□□□ -2.09
SMG6-204ENST00000570606 MT1AP04731 61 aa1.95□□□□□ -2.1
SMG6-204ENST00000570606 KRTAP6-1Q3LI64 71 aa1.95□□□□□ -2.1
SMG6-204ENST00000570606 MUC5ACP98088 5654 aa1.94□□□□□ -2.1
SMG6-204ENST00000570606 LCE1CQ5T751 118 aa1.93□□□□□ -2.1
SMG6-204ENST00000570606 LCE1BQ5T7P3 118 aa1.93□□□□□ -2.1
SMG6-204ENST00000570606 KRTAP5-8O75690 187 aa1.92□□□□□ -2.1
SMG6-204ENST00000570606 KRTAP6-2Q3LI66 62 aa1.88□□□□□ -2.11
SMG6-204ENST00000570606 INE1O15225 51 aa1.59□□□□□ -2.15
SMG6-204ENST00000570606 MUC19Q7Z5P9 8384 aa1.5□□□□□ -2.17
SMG6-204ENST00000570606 KRTAP21-2Q3LI59 83 aa1.36□□□□□ -2.19
SMG6-204ENST00000570606 PHGR1C9JFL3 82 aa1.35□□□□□ -2.19
SMG6-204ENST00000570606 PRM1P04553 51 aa1.06□□□□□ -2.24
SMG6-204ENST00000570606 KRTAP21-1Q3LI58 79 aa1.02□□□□□ -2.25
SMG6-204ENST00000570606 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 70.6 ms