RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 KRTAP10-5P60370 271 aa2.75□□□□□ -1.97
CTDNEP1-204ENST00000570484 KRTAP10-12P60413 245 aa2.74□□□□□ -1.97
CTDNEP1-204ENST00000570484 MT1XP80297 61 aa2.73□□□□□ -1.97
CTDNEP1-204ENST00000570484 KRTAP5-1Q6L8H4 278 aa2.7□□□□□ -1.98
CTDNEP1-204ENST00000570484 SSPOA2VEC9 5147 aa2.69□□□□□ -1.98
CTDNEP1-204ENST00000570484 KRTAP5-4Q6L8H1 288 aa2.68□□□□□ -1.98
CTDNEP1-204ENST00000570484 TNP1P09430 55 aa2.66□□□□□ -1.98
CTDNEP1-204ENST00000570484 ROMO1P60602 79 aa2.65□□□□□ -1.99
CTDNEP1-204ENST00000570484 C10orf95Q9H7T3 257 aa2.64□□□□□ -1.99
CTDNEP1-204ENST00000570484 PRO0628Q9UI54 55 aa2.64□□□□□ -1.99
CTDNEP1-204ENST00000570484 KRTAP4-4Q9BYR3 166 aa2.63□□□□□ -1.99
CTDNEP1-204ENST00000570484 PMAIP1Q13794 54 aa2.62□□□□□ -1.99
CTDNEP1-204ENST00000570484 KRTAP25-1Q3LHN0 102 aa2.62□□□□□ -1.99
CTDNEP1-204ENST00000570484 FCGBPQ9Y6R7 5405 aaPredicted RBP2.62□□□□□ -1.99
CTDNEP1-204ENST00000570484 LCE3CQ5T5A8 94 aa2.61□□□□□ -1.99
CTDNEP1-204ENST00000570484 KRTAP8-1Q8IUC2 63 aa2.57□□□□□ -2
CTDNEP1-204ENST00000570484 MACF1Q9UPN3 7388 aaKnown RBP2.56□□□□□ -2
CTDNEP1-204ENST00000570484 LCE3AQ5TA76 89 aa2.53□□□□□ -2
CTDNEP1-204ENST00000570484 PP632Q6XCG6 107 aa2.52□□□□□ -2.01
CTDNEP1-204ENST00000570484 KRTAP9-6A8MVA2 160 aa2.51□□□□□ -2.01
CTDNEP1-204ENST00000570484 SPRR2FQ96RM1 72 aa2.5□□□□□ -2.01
CTDNEP1-204ENST00000570484 KRTAP6-3Q3LI67 103 aa2.49□□□□□ -2.01
CTDNEP1-204ENST00000570484 KTN1-AS1Q86SY8 53 aa2.48□□□□□ -2.01
CTDNEP1-204ENST00000570484 SYNE2Q8WXH0 6885 aaKnown RBP2.47□□□□□ -2.01
CTDNEP1-204ENST00000570484 KRTAP12-3P60328 96 aa2.45□□□□□ -2.02
CTDNEP1-204ENST00000570484 KRTAP19-5Q3LI72 72 aa2.45□□□□□ -2.02
CTDNEP1-204ENST00000570484 KMT2DO14686 5537 aa2.43□□□□□ -2.02
CTDNEP1-204ENST00000570484 MT1EP04732 61 aa2.42□□□□□ -2.02
CTDNEP1-204ENST00000570484 KRTAP19-7Q3SYF9 63 aa2.42□□□□□ -2.02
CTDNEP1-204ENST00000570484 SPRR2EP22531 72 aa2.4□□□□□ -2.03
CTDNEP1-204ENST00000570484 SPRR2BP35325 72 aa2.4□□□□□ -2.03
CTDNEP1-204ENST00000570484 SPRR2AP35326 72 aa2.4□□□□□ -2.03
CTDNEP1-204ENST00000570484 LCE3EQ5T5B0 92 aa2.38□□□□□ -2.03
CTDNEP1-204ENST00000570484 KRTAP19-3Q7Z4W3 81 aa2.36□□□□□ -2.03
CTDNEP1-204ENST00000570484 OBSCNQ5VST9 7968 aa2.35□□□□□ -2.03
CTDNEP1-204ENST00000570484 MT1LQ93083 61 aa2.35□□□□□ -2.03
CTDNEP1-204ENST00000570484 SPRR2DP22532 72 aa2.33□□□□□ -2.04
CTDNEP1-204ENST00000570484 MT1GP13640 62 aa2.32□□□□□ -2.04
CTDNEP1-204ENST00000570484 NEBP20929 6669 aa2.31□□□□□ -2.04
CTDNEP1-204ENST00000570484 MUC12Q9UKN1 5478 aa2.3□□□□□ -2.04
CTDNEP1-204ENST00000570484 MDN1Q9NU22 5596 aa2.29□□□□□ -2.04
CTDNEP1-204ENST00000570484 KRTAP5-2Q701N4 177 aa2.29□□□□□ -2.04
CTDNEP1-204ENST00000570484 MT1MQ8N339 61 aa2.28□□□□□ -2.04
CTDNEP1-204ENST00000570484 KRTAP4-3Q9BYR4 195 aa2.27□□□□□ -2.05
CTDNEP1-204ENST00000570484 KRTAP20-1Q3LI63 56 aa2.23□□□□□ -2.05
CTDNEP1-204ENST00000570484 KRTAP2-3P0C7H8 128 aa2.2□□□□□ -2.06
CTDNEP1-204ENST00000570484 KRTAP2-4Q9BYR9 128 aa2.2□□□□□ -2.06
CTDNEP1-204ENST00000570484 KRTAP2-1Q9BYU5 128 aa2.15□□□□□ -2.07
CTDNEP1-204ENST00000570484 SPRR5A0A1B0GTR4 108 aa2.11□□□□□ -2.07
CTDNEP1-204ENST00000570484 LUZP6Q538Z0 58 aa2.1□□□□□ -2.07
CTDNEP1-204ENST00000570484 DSTQ03001 7570 aaKnown RBP2.1□□□□□ -2.07
CTDNEP1-204ENST00000570484 KRTAP5-5Q701N2 237 aaPredicted RBP2.04□□□□□ -2.08
CTDNEP1-204ENST00000570484 KRTAP5-8O75690 187 aa2.01□□□□□ -2.09
CTDNEP1-204ENST00000570484 MT1AP04731 61 aa2.01□□□□□ -2.09
CTDNEP1-204ENST00000570484 MT4P47944 62 aa2□□□□□ -2.09
CTDNEP1-204ENST00000570484 KRTAP12-4P60329 112 aa1.99□□□□□ -2.09
CTDNEP1-204ENST00000570484 KRTAP6-1Q3LI64 71 aa1.97□□□□□ -2.09
CTDNEP1-204ENST00000570484 LCE3DQ9BYE3 92 aa1.96□□□□□ -2.1
CTDNEP1-204ENST00000570484 KRTAP20-2Q3LI61 65 aa1.91□□□□□ -2.1
CTDNEP1-204ENST00000570484 SYNE1Q8NF91 8797 aaKnown RBP1.91□□□□□ -2.1
CTDNEP1-204ENST00000570484 HMCN1Q96RW7 5635 aa1.89□□□□□ -2.11
CTDNEP1-204ENST00000570484 KRTAP6-2Q3LI66 62 aa1.85□□□□□ -2.11
CTDNEP1-204ENST00000570484 LCE1CQ5T751 118 aa1.85□□□□□ -2.11
CTDNEP1-204ENST00000570484 LCE1BQ5T7P3 118 aa1.85□□□□□ -2.11
CTDNEP1-204ENST00000570484 AHNAK2Q8IVF2 5795 aa1.72□□□□□ -2.13
CTDNEP1-204ENST00000570484 GPR98Q8WXG9 6306 aa1.7□□□□□ -2.14
CTDNEP1-204ENST00000570484 KRTAP5-10Q6L8G5 202 aa1.69□□□□□ -2.14
CTDNEP1-204ENST00000570484 INE1O15225 51 aa1.62□□□□□ -2.15
CTDNEP1-204ENST00000570484 KRTAP5-7Q6L8G8 165 aa1.6□□□□□ -2.15
CTDNEP1-204ENST00000570484 MUC19Q7Z5P9 8384 aa1.49□□□□□ -2.17
CTDNEP1-204ENST00000570484 MUC5ACP98088 5654 aa1.48□□□□□ -2.17
CTDNEP1-204ENST00000570484 PRM1P04553 51 aa1.37□□□□□ -2.19
CTDNEP1-204ENST00000570484 MUC5BQ9HC84 5762 aaPredicted RBP1.36□□□□□ -2.19
CTDNEP1-204ENST00000570484 AHNAKQ09666 5890 aaKnown RBP1.36□□□□□ -2.19
CTDNEP1-204ENST00000570484 KRTAP21-2Q3LI59 83 aa1.31□□□□□ -2.2
CTDNEP1-204ENST00000570484 PHGR1C9JFL3 82 aa1.14□□□□□ -2.23
CTDNEP1-204ENST00000570484 KRTAP21-1Q3LI58 79 aa0.78□□□□□ -2.28
CTDNEP1-204ENST00000570484 MUC16Q8WXI7 14507 aa0.74□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 141.2 ms