RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 SERP1Q9Y6X1 66 aa3.06□□□□□ -1.92
CTDNEP1-203ENST00000570385 HMCN1Q96RW7 5635 aa3.05□□□□□ -1.92
CTDNEP1-203ENST00000570385 MT1LQ93083 61 aa3.05□□□□□ -1.92
CTDNEP1-203ENST00000570385 KRTAP12-1P59990 96 aa3.04□□□□□ -1.92
CTDNEP1-203ENST00000570385 AHNAK2Q8IVF2 5795 aa3.02□□□□□ -1.93
CTDNEP1-203ENST00000570385 A0A1B0GU33 70 aa3.02□□□□□ -1.93
CTDNEP1-203ENST00000570385 SERP2Q8N6R1 65 aa3.02□□□□□ -1.93
CTDNEP1-203ENST00000570385 K7ERU9 68 aa3.01□□□□□ -1.93
CTDNEP1-203ENST00000570385 C10orf95Q9H7T3 257 aa3□□□□□ -1.93
CTDNEP1-203ENST00000570385 LCE3AQ5TA76 89 aa2.99□□□□□ -1.93
CTDNEP1-203ENST00000570385 KRTAP5-10Q6L8G5 202 aa2.98□□□□□ -1.93
CTDNEP1-203ENST00000570385 KRTAP5-4Q6L8H1 288 aa2.98□□□□□ -1.93
CTDNEP1-203ENST00000570385 A8MU10 97 aa2.97□□□□□ -1.93
CTDNEP1-203ENST00000570385 PRO0628Q9UI54 55 aa2.94□□□□□ -1.94
CTDNEP1-203ENST00000570385 SMIM26A0A096LP01 95 aa2.92□□□□□ -1.94
CTDNEP1-203ENST00000570385 TNP1P09430 55 aa2.92□□□□□ -1.94
CTDNEP1-203ENST00000570385 A0A1B0GU69 56 aa2.91□□□□□ -1.94
CTDNEP1-203ENST00000570385 H7BZZ5 65 aa2.88□□□□□ -1.95
CTDNEP1-203ENST00000570385 COX7CP15954 63 aa2.87□□□□□ -1.95
CTDNEP1-203ENST00000570385 KRTAP5-7Q6L8G8 165 aa2.87□□□□□ -1.95
CTDNEP1-203ENST00000570385 KRTAP12-3P60328 96 aa2.86□□□□□ -1.95
CTDNEP1-203ENST00000570385 RPS28P62857 69 aaKnown RBP2.85□□□□□ -1.95
CTDNEP1-203ENST00000570385 KRTAP20-2Q3LI61 65 aa2.85□□□□□ -1.95
CTDNEP1-203ENST00000570385 PMAIP1Q13794 54 aa2.83□□□□□ -1.96
CTDNEP1-203ENST00000570385 KRTAP15-1Q3LI76 137 aa2.83□□□□□ -1.96
CTDNEP1-203ENST00000570385 KRTAP5-5Q701N2 237 aaPredicted RBP2.81□□□□□ -1.96
CTDNEP1-203ENST00000570385 SPRR5A0A1B0GTR4 108 aa2.8□□□□□ -1.96
CTDNEP1-203ENST00000570385 KRTAP12-4P60329 112 aa2.78□□□□□ -1.96
CTDNEP1-203ENST00000570385 SYNE1Q8NF91 8797 aaKnown RBP2.77□□□□□ -1.97
CTDNEP1-203ENST00000570385 PRR15LQ9BU68 103 aa2.75□□□□□ -1.97
CTDNEP1-203ENST00000570385 ANAPC13Q9BS18 74 aa2.74□□□□□ -1.97
CTDNEP1-203ENST00000570385 PSPHP1O15172 72 aa2.7□□□□□ -1.98
CTDNEP1-203ENST00000570385 LINC01558Q9Y6Z2 57 aa2.69□□□□□ -1.98
CTDNEP1-203ENST00000570385 CCDC179H3BU77 68 aa2.68□□□□□ -1.98
CTDNEP1-203ENST00000570385 PRAC1Q96KF2 57 aa2.68□□□□□ -1.98
CTDNEP1-203ENST00000570385 UQCR11O14957 56 aa2.66□□□□□ -1.98
CTDNEP1-203ENST00000570385 KRTAP25-1Q3LHN0 102 aa2.66□□□□□ -1.98
CTDNEP1-203ENST00000570385 KTN1-AS1Q86SY8 53 aa2.62□□□□□ -1.99
CTDNEP1-203ENST00000570385 ATP5EP56381 51 aaPredicted RBP2.61□□□□□ -1.99
CTDNEP1-203ENST00000570385 LCE3CQ5T5A8 94 aa2.61□□□□□ -1.99
CTDNEP1-203ENST00000570385 MIR22HGQ0VDD5 57 aa2.6□□□□□ -1.99
CTDNEP1-203ENST00000570385 KRTAP6-1Q3LI64 71 aa2.6□□□□□ -1.99
CTDNEP1-203ENST00000570385 BRK1Q8WUW1 75 aa2.6□□□□□ -1.99
CTDNEP1-203ENST00000570385 TMEM258P61165 79 aa2.59□□□□□ -1.99
CTDNEP1-203ENST00000570385 MT1AP04731 61 aa2.58□□□□□ -2
CTDNEP1-203ENST00000570385 KRTAP5-2Q701N4 177 aa2.58□□□□□ -2
CTDNEP1-203ENST00000570385 K7ERS5 55 aa2.56□□□□□ -2
CTDNEP1-203ENST00000570385 KRTAP5-8O75690 187 aa2.55□□□□□ -2
CTDNEP1-203ENST00000570385 AHNAKQ09666 5890 aaKnown RBP2.53□□□□□ -2.01
CTDNEP1-203ENST00000570385 KRTAP6-2Q3LI66 62 aa2.52□□□□□ -2.01
CTDNEP1-203ENST00000570385 MUC5ACP98088 5654 aa2.52□□□□□ -2.01
CTDNEP1-203ENST00000570385 OBSCNQ5VST9 7968 aa2.51□□□□□ -2.01
CTDNEP1-203ENST00000570385 KRTAP9-6A8MVA2 160 aa2.49□□□□□ -2.01
CTDNEP1-203ENST00000570385 MUC5BQ9HC84 5762 aaPredicted RBP2.47□□□□□ -2.01
CTDNEP1-203ENST00000570385 LUZP6Q538Z0 58 aa2.44□□□□□ -2.02
CTDNEP1-203ENST00000570385 CDC42SE1Q9NRR8 79 aa2.42□□□□□ -2.02
CTDNEP1-203ENST00000570385 NDUFAF8A1L188 74 aa2.41□□□□□ -2.02
CTDNEP1-203ENST00000570385 A6NED7 52 aa2.41□□□□□ -2.02
CTDNEP1-203ENST00000570385 Q1T7F1 81 aa2.41□□□□□ -2.02
CTDNEP1-203ENST00000570385 ROMO1P60602 79 aa2.37□□□□□ -2.03
CTDNEP1-203ENST00000570385 MT3P25713 68 aa2.36□□□□□ -2.03
CTDNEP1-203ENST00000570385 KRTAP5-11Q6L8G4 156 aa2.36□□□□□ -2.03
CTDNEP1-203ENST00000570385 KRTAP5-1Q6L8H4 278 aa2.36□□□□□ -2.03
CTDNEP1-203ENST00000570385 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.33□□□□□ -2.04
CTDNEP1-203ENST00000570385 LCE1EQ5T753 118 aa2.18□□□□□ -2.06
CTDNEP1-203ENST00000570385 LCE1BQ5T7P3 118 aa2.14□□□□□ -2.07
CTDNEP1-203ENST00000570385 LCE1CQ5T751 118 aa2.02□□□□□ -2.09
CTDNEP1-203ENST00000570385 LCE1FQ5T754 118 aa1.99□□□□□ -2.09
CTDNEP1-203ENST00000570385 KRTAP4-4Q9BYR3 166 aa1.98□□□□□ -2.09
CTDNEP1-203ENST00000570385 INE1O15225 51 aa1.91□□□□□ -2.1
CTDNEP1-203ENST00000570385 LCE3DQ9BYE3 92 aa1.85□□□□□ -2.11
CTDNEP1-203ENST00000570385 PHGR1C9JFL3 82 aa1.76□□□□□ -2.13
CTDNEP1-203ENST00000570385 LCE3EQ5T5B0 92 aa1.73□□□□□ -2.13
CTDNEP1-203ENST00000570385 KRTAP21-2Q3LI59 83 aa1.7□□□□□ -2.14
CTDNEP1-203ENST00000570385 MUC19Q7Z5P9 8384 aa1.58□□□□□ -2.16
CTDNEP1-203ENST00000570385 KRTAP21-1Q3LI58 79 aa1.31□□□□□ -2.2
CTDNEP1-203ENST00000570385 PRM1P04553 51 aa1.23□□□□□ -2.21
CTDNEP1-203ENST00000570385 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 39.5 ms