RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 M0R2T5 61 aa3.35□□□□□ -1.87
TCF4-246ENST00000570287 TNP1P09430 55 aa3.32□□□□□ -1.88
TCF4-246ENST00000570287 MT2AP02795 61 aa3.29□□□□□ -1.88
TCF4-246ENST00000570287 MT1FP04733 61 aa3.28□□□□□ -1.88
TCF4-246ENST00000570287 KRTAP10-10P60014 251 aa3.28□□□□□ -1.88
TCF4-246ENST00000570287 KRTAP19-8Q3LI54 63 aa3.23□□□□□ -1.89
TCF4-246ENST00000570287 MT1BP07438 61 aa3.16□□□□□ -1.9
TCF4-246ENST00000570287 LCE3DQ9BYE3 92 aa3.16□□□□□ -1.9
TCF4-246ENST00000570287 KRTAP10-5P60370 271 aa3.12□□□□□ -1.91
TCF4-246ENST00000570287 LCE3AQ5TA76 89 aa3.12□□□□□ -1.91
TCF4-246ENST00000570287 MT1XP80297 61 aa3.12□□□□□ -1.91
TCF4-246ENST00000570287 KRTAP6-3Q3LI67 103 aa3.12□□□□□ -1.91
TCF4-246ENST00000570287 KRTAP8-1Q8IUC2 63 aa3.1□□□□□ -1.91
TCF4-246ENST00000570287 KRTAP10-7P60409 375 aaPredicted RBP3.08□□□□□ -1.92
TCF4-246ENST00000570287 KRTAP12-3P60328 96 aa2.99□□□□□ -1.93
TCF4-246ENST00000570287 SSPOA2VEC9 5147 aa2.97□□□□□ -1.93
TCF4-246ENST00000570287 KRTAP20-1Q3LI63 56 aa2.96□□□□□ -1.94
TCF4-246ENST00000570287 USH2AO75445 5202 aa2.93□□□□□ -1.94
TCF4-246ENST00000570287 MUC5BQ9HC84 5762 aaPredicted RBP2.92□□□□□ -1.94
TCF4-246ENST00000570287 KRTAP19-5Q3LI72 72 aa2.88□□□□□ -1.95
TCF4-246ENST00000570287 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.85□□□□□ -1.95
TCF4-246ENST00000570287 KRTAP2-3P0C7H8 128 aa2.84□□□□□ -1.95
TCF4-246ENST00000570287 KRTAP2-4Q9BYR9 128 aa2.84□□□□□ -1.95
TCF4-246ENST00000570287 KRTAP2-1Q9BYU5 128 aa2.84□□□□□ -1.95
TCF4-246ENST00000570287 KMT2DO14686 5537 aa2.83□□□□□ -1.96
TCF4-246ENST00000570287 KRTAP19-7Q3SYF9 63 aa2.78□□□□□ -1.96
TCF4-246ENST00000570287 KRTAP9-6A8MVA2 160 aa2.77□□□□□ -1.97
TCF4-246ENST00000570287 KRTAP12-4P60329 112 aa2.77□□□□□ -1.97
TCF4-246ENST00000570287 KRTAP19-6Q3LI70 58 aa2.77□□□□□ -1.97
TCF4-246ENST00000570287 FSIP2Q5CZC0 6907 aa2.72□□□□□ -1.97
TCF4-246ENST00000570287 MT1EP04732 61 aa2.71□□□□□ -1.97
TCF4-246ENST00000570287 GPR98Q8WXG9 6306 aa2.71□□□□□ -1.97
TCF4-246ENST00000570287 NEBP20929 6669 aa2.71□□□□□ -1.98
TCF4-246ENST00000570287 MT1LQ93083 61 aa2.7□□□□□ -1.98
TCF4-246ENST00000570287 FCGBPQ9Y6R7 5405 aaPredicted RBP2.64□□□□□ -1.99
TCF4-246ENST00000570287 SYNE2Q8WXH0 6885 aaKnown RBP2.57□□□□□ -2
TCF4-246ENST00000570287 KRTAP19-3Q7Z4W3 81 aa2.56□□□□□ -2
TCF4-246ENST00000570287 MT1GP13640 62 aa2.56□□□□□ -2
TCF4-246ENST00000570287 KRTAP5-9P26371 169 aa2.56□□□□□ -2
TCF4-246ENST00000570287 MT1MQ8N339 61 aa2.54□□□□□ -2
TCF4-246ENST00000570287 MUC12Q9UKN1 5478 aa2.53□□□□□ -2
TCF4-246ENST00000570287 MACF1Q9UPN3 7388 aaKnown RBP2.52□□□□□ -2.01
TCF4-246ENST00000570287 KRTAP4-3Q9BYR4 195 aa2.51□□□□□ -2.01
TCF4-246ENST00000570287 SPRR2FQ96RM1 72 aa2.48□□□□□ -2.01
TCF4-246ENST00000570287 SPRR2EP22531 72 aa2.39□□□□□ -2.03
TCF4-246ENST00000570287 SPRR2BP35325 72 aa2.39□□□□□ -2.03
TCF4-246ENST00000570287 SPRR2AP35326 72 aa2.39□□□□□ -2.03
TCF4-246ENST00000570287 KRTAP5-4Q6L8H1 288 aa2.39□□□□□ -2.03
TCF4-246ENST00000570287 KRTAP5-7Q6L8G8 165 aa2.37□□□□□ -2.03
TCF4-246ENST00000570287 DSTQ03001 7570 aaKnown RBP2.36□□□□□ -2.03
TCF4-246ENST00000570287 AHNAKQ09666 5890 aaKnown RBP2.35□□□□□ -2.03
TCF4-246ENST00000570287 MDN1Q9NU22 5596 aa2.35□□□□□ -2.03
TCF4-246ENST00000570287 SPRR2DP22532 72 aa2.35□□□□□ -2.03
TCF4-246ENST00000570287 MT1AP04731 61 aa2.33□□□□□ -2.04
TCF4-246ENST00000570287 KRTAP5-5Q701N2 237 aaPredicted RBP2.29□□□□□ -2.04
TCF4-246ENST00000570287 KRTAP5-10Q6L8G5 202 aa2.28□□□□□ -2.04
TCF4-246ENST00000570287 KRTAP6-1Q3LI64 71 aa2.27□□□□□ -2.05
TCF4-246ENST00000570287 KRTAP5-11Q6L8G4 156 aa2.27□□□□□ -2.05
TCF4-246ENST00000570287 PRM1P04553 51 aa2.25□□□□□ -2.05
TCF4-246ENST00000570287 SYNE1Q8NF91 8797 aaKnown RBP2.19□□□□□ -2.06
TCF4-246ENST00000570287 AHNAK2Q8IVF2 5795 aa2.19□□□□□ -2.06
TCF4-246ENST00000570287 OBSCNQ5VST9 7968 aa2.18□□□□□ -2.06
TCF4-246ENST00000570287 KRTAP4-4Q9BYR3 166 aa2.18□□□□□ -2.06
TCF4-246ENST00000570287 KRTAP5-1Q6L8H4 278 aa2.17□□□□□ -2.06
TCF4-246ENST00000570287 MUC19Q7Z5P9 8384 aa2.15□□□□□ -2.07
TCF4-246ENST00000570287 LCE1CQ5T751 118 aa2.11□□□□□ -2.07
TCF4-246ENST00000570287 LCE1BQ5T7P3 118 aa2.11□□□□□ -2.07
TCF4-246ENST00000570287 KRTAP6-2Q3LI66 62 aa2.1□□□□□ -2.07
TCF4-246ENST00000570287 KRTAP5-2Q701N4 177 aa2.08□□□□□ -2.08
TCF4-246ENST00000570287 MT4P47944 62 aa1.97□□□□□ -2.09
TCF4-246ENST00000570287 KRTAP5-8O75690 187 aa1.93□□□□□ -2.1
TCF4-246ENST00000570287 KRTAP20-2Q3LI61 65 aa1.9□□□□□ -2.1
TCF4-246ENST00000570287 MUC5ACP98088 5654 aa1.89□□□□□ -2.11
TCF4-246ENST00000570287 KRTAP21-1Q3LI58 79 aa1.61□□□□□ -2.15
TCF4-246ENST00000570287 KRTAP21-2Q3LI59 83 aa1.48□□□□□ -2.17
TCF4-246ENST00000570287 PHGR1C9JFL3 82 aa1.35□□□□□ -2.19
TCF4-246ENST00000570287 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 37.1 ms