RNA–Protein interactions for RNA: ENST00000570270.1

TAF1C-223, Transcript of TATA-box binding protein associated factor, RNA polymerase I subunit C, human

TSL 3

Gene TAF1C, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TAF1C-223	ENST00000570270	TNP1	P09430	55 aa		5.06	□□□□□ -1.6
TAF1C-223	ENST00000570270	PP632	Q6XCG6	107 aa		5.02	□□□□□ -1.61
TAF1C-223	ENST00000570270	MT1G	P13640	62 aa		5	□□□□□ -1.61
TAF1C-223	ENST00000570270	KRTAP19-5	Q3LI72	72 aa		5	□□□□□ -1.61
TAF1C-223	ENST00000570270	BRK1	Q8WUW1	75 aa		4.94	□□□□□ -1.62
TAF1C-223	ENST00000570270	KRTAP25-1	Q3LHN0	102 aa		4.92	□□□□□ -1.62
TAF1C-223	ENST00000570270	DST	Q03001	7570 aa	Known RBP	4.91	□□□□□ -1.62
TAF1C-223	ENST00000570270	LCE3A	Q5TA76	89 aa		4.91	□□□□□ -1.62
TAF1C-223	ENST00000570270	ROMO1	P60602	79 aa		4.88	□□□□□ -1.63
TAF1C-223	ENST00000570270	MT1L	Q93083	61 aa		4.86	□□□□□ -1.63
TAF1C-223	ENST00000570270	MT1M	Q8N339	61 aa		4.84	□□□□□ -1.63
TAF1C-223	ENST00000570270	LCE4A	Q5TA78	99 aa		4.78	□□□□□ -1.64
TAF1C-223	ENST00000570270	KRTAP12-3	P60328	96 aa		4.77	□□□□□ -1.65
TAF1C-223	ENST00000570270	KRTAP4-9	Q9BYQ8	210 aa		4.77	□□□□□ -1.65
TAF1C-223	ENST00000570270	KRTAP23-1	A1A580	65 aa		4.71	□□□□□ -1.66
TAF1C-223	ENST00000570270	LCE1D	Q5T752	114 aa		4.69	□□□□□ -1.66
TAF1C-223	ENST00000570270	KRTAP19-4	Q3LI73	84 aa		4.65	□□□□□ -1.67
TAF1C-223	ENST00000570270	KRTAP4-3	Q9BYR4	195 aa		4.65	□□□□□ -1.67
TAF1C-223	ENST00000570270	MT4	P47944	62 aa		4.64	□□□□□ -1.67
TAF1C-223	ENST00000570270	PMAIP1	Q13794	54 aa		4.64	□□□□□ -1.67
TAF1C-223	ENST00000570270	KRTAP5-4	Q6L8H1	288 aa		4.61	□□□□□ -1.67
TAF1C-223	ENST00000570270	HMCN1	Q96RW7	5635 aa		4.59	□□□□□ -1.68
TAF1C-223	ENST00000570270	PRO0628	Q9UI54	55 aa		4.58	□□□□□ -1.68
TAF1C-223	ENST00000570270	GPR98	Q8WXG9	6306 aa		4.58	□□□□□ -1.68
TAF1C-223	ENST00000570270	KRTAP4-7	Q9BYR0	210 aa		4.55	□□□□□ -1.68
TAF1C-223	ENST00000570270	KRTAP15-1	Q3LI76	137 aa		4.52	□□□□□ -1.69
TAF1C-223	ENST00000570270	KRTAP4-6	Q9BYQ5	205 aa		4.48	□□□□□ -1.69
TAF1C-223	ENST00000570270	KRTAP12-4	P60329	112 aa		4.43	□□□□□ -1.7
TAF1C-223	ENST00000570270	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.42	□□□□□ -1.7
TAF1C-223	ENST00000570270	SPRR5	A0A1B0GTR4	108 aa		4.4	□□□□□ -1.71
TAF1C-223	ENST00000570270	PRAC1	Q96KF2	57 aa		4.4	□□□□□ -1.71
TAF1C-223	ENST00000570270	AHNAK2	Q8IVF2	5795 aa		4.39	□□□□□ -1.71
TAF1C-223	ENST00000570270	LCE3C	Q5T5A8	94 aa		4.38	□□□□□ -1.71
TAF1C-223	ENST00000570270	KRTAP20-2	Q3LI61	65 aa		4.36	□□□□□ -1.71
TAF1C-223	ENST00000570270	KRTAP5-10	Q6L8G5	202 aa		4.34	□□□□□ -1.71
TAF1C-223	ENST00000570270	LOC100996750	A0A140TA64	210 aa		4.31	□□□□□ -1.72
TAF1C-223	ENST00000570270	KTN1-AS1	Q86SY8	53 aa		4.31	□□□□□ -1.72
TAF1C-223	ENST00000570270	KRTAP5-3	Q6L8H2	238 aa		4.27	□□□□□ -1.73
TAF1C-223	ENST00000570270	SYNE1	Q8NF91	8797 aa	Known RBP	4.22	□□□□□ -1.73
TAF1C-223	ENST00000570270	KRTAP5-7	Q6L8G8	165 aa		4.21	□□□□□ -1.74
TAF1C-223	ENST00000570270	MT1A	P04731	61 aa		4.16	□□□□□ -1.74
TAF1C-223	ENST00000570270	SVIP	Q8NHG7	77 aa		4.16	□□□□□ -1.74
TAF1C-223	ENST00000570270	KRTAP9-6	A8MVA2	160 aa		4.09	□□□□□ -1.75
TAF1C-223	ENST00000570270	KRTAP6-1	Q3LI64	71 aa		4.09	□□□□□ -1.75
TAF1C-223	ENST00000570270	KRTAP5-2	Q701N4	177 aa		4.03	□□□□□ -1.76
TAF1C-223	ENST00000570270	KRTAP9-4	Q9BYQ2	154 aa		4.03	□□□□□ -1.76
TAF1C-223	ENST00000570270	KRTAP4-11	Q9BYQ6	195 aa		3.99	□□□□□ -1.77
TAF1C-223	ENST00000570270	KRTAP6-2	Q3LI66	62 aa		3.92	□□□□□ -1.78
TAF1C-223	ENST00000570270	MT3	P25713	68 aa		3.87	□□□□□ -1.79
TAF1C-223	ENST00000570270	KRTAP5-8	O75690	187 aa		3.82	□□□□□ -1.8
TAF1C-223	ENST00000570270	KRTAP9-9	Q9BYP9	154 aa		3.72	□□□□□ -1.81
TAF1C-223	ENST00000570270	OBSCN	Q5VST9	7968 aa		3.71	□□□□□ -1.82
TAF1C-223	ENST00000570270	LUZP6	Q538Z0	58 aa		3.67	□□□□□ -1.82
TAF1C-223	ENST00000570270	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.66	□□□□□ -1.82
TAF1C-223	ENST00000570270	KRTAP5-1	Q6L8H4	278 aa		3.61	□□□□□ -1.83
TAF1C-223	ENST00000570270	AHNAK	Q09666	5890 aa	Known RBP	3.61	□□□□□ -1.83
TAF1C-223	ENST00000570270	MUC5AC	P98088	5654 aa		3.59	□□□□□ -1.83
TAF1C-223	ENST00000570270	LCE1E	Q5T753	118 aa		3.54	□□□□□ -1.84
TAF1C-223	ENST00000570270	NDUFAF8	A1L188	74 aa		3.29	□□□□□ -1.88
TAF1C-223	ENST00000570270	LCE1B	Q5T7P3	118 aa		3.29	□□□□□ -1.88
TAF1C-223	ENST00000570270	LCE1C	Q5T751	118 aa		3.27	□□□□□ -1.89
TAF1C-223	ENST00000570270	KRTAP4-2	Q9BYR5	136 aa		3.26	□□□□□ -1.89
TAF1C-223	ENST00000570270	LCE3D	Q9BYE3	92 aa		3.22	□□□□□ -1.89
TAF1C-223	ENST00000570270	LCE3E	Q5T5B0	92 aa		3.09	□□□□□ -1.91
TAF1C-223	ENST00000570270	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.97	□□□□□ -1.93
TAF1C-223	ENST00000570270	KRTAP5-11	Q6L8G4	156 aa		2.95	□□□□□ -1.94
TAF1C-223	ENST00000570270	KRTAP4-12	Q9BQ66	201 aa		2.93	□□□□□ -1.94
TAF1C-223	ENST00000570270	LCE1F	Q5T754	118 aa		2.92	□□□□□ -1.94
TAF1C-223	ENST00000570270		A0A0A0MQY5	61 aa		2.79	□□□□□ -1.96
TAF1C-223	ENST00000570270	KRTAP21-2	Q3LI59	83 aa		2.69	□□□□□ -1.98
TAF1C-223	ENST00000570270	INE1	O15225	51 aa		2.67	□□□□□ -1.98
TAF1C-223	ENST00000570270	PHGR1	C9JFL3	82 aa		2.56	□□□□□ -2
TAF1C-223	ENST00000570270	PRM1	P04553	51 aa		2.53	□□□□□ -2
TAF1C-223	ENST00000570270	KRTAP4-4	Q9BYR3	166 aa		2.43	□□□□□ -2.02
TAF1C-223	ENST00000570270	MUC19	Q7Z5P9	8384 aa		2.3	□□□□□ -2.04
TAF1C-223	ENST00000570270		H3BS24	57 aa		2.19	□□□□□ -2.06
TAF1C-223	ENST00000570270	KRTAP21-1	Q3LI58	79 aa		1.99	□□□□□ -2.09
TAF1C-223	ENST00000570270	MUC16	Q8WXI7	14507 aa		1.67	□□□□□ -2.14

Retrieved 78 of 20,778 RNA–protein pairs in 242.6 ms