RNA–Protein interactions for RNA: ENST00000570129.1

GTF3C1-212, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-212ENST00000570129 KRTAP2-4Q9BYR9 128 aa3.7□□□□□ -1.82
GTF3C1-212ENST00000570129 C10orf95Q9H7T3 257 aa3.7□□□□□ -1.82
GTF3C1-212ENST00000570129 SMIM26A0A096LP01 95 aa3.69□□□□□ -1.82
GTF3C1-212ENST00000570129 SPRR2DP22532 72 aa3.68□□□□□ -1.82
GTF3C1-212ENST00000570129 MT1EP04732 61 aa3.65□□□□□ -1.83
GTF3C1-212ENST00000570129 KRTAP19-5Q3LI72 72 aa3.65□□□□□ -1.83
GTF3C1-212ENST00000570129 PRR15LQ9BU68 103 aa3.65□□□□□ -1.83
GTF3C1-212ENST00000570129 LCE3AQ5TA76 89 aa3.61□□□□□ -1.83
GTF3C1-212ENST00000570129 PSPHP1O15172 72 aa3.6□□□□□ -1.83
GTF3C1-212ENST00000570129 NDUFAF8A1L188 74 aa3.59□□□□□ -1.83
GTF3C1-212ENST00000570129 KRTAP2-2Q9BYT5 123 aa3.58□□□□□ -1.84
GTF3C1-212ENST00000570129 KRTAP2-1Q9BYU5 128 aa3.58□□□□□ -1.84
GTF3C1-212ENST00000570129 UQCR11O14957 56 aa3.56□□□□□ -1.84
GTF3C1-212ENST00000570129 KRTAP19-3Q7Z4W3 81 aa3.56□□□□□ -1.84
GTF3C1-212ENST00000570129 MIR22HGQ0VDD5 57 aa3.54□□□□□ -1.84
GTF3C1-212ENST00000570129 Q1T7F1 81 aa3.53□□□□□ -1.84
GTF3C1-212ENST00000570129 TNP1P09430 55 aa3.52□□□□□ -1.85
GTF3C1-212ENST00000570129 KRTAP4-3Q9BYR4 195 aa3.52□□□□□ -1.85
GTF3C1-212ENST00000570129 MT1LQ93083 61 aa3.51□□□□□ -1.85
GTF3C1-212ENST00000570129 KRTAP5-3Q6L8H2 238 aa3.49□□□□□ -1.85
GTF3C1-212ENST00000570129 MT1MQ8N339 61 aa3.47□□□□□ -1.85
GTF3C1-212ENST00000570129 MT1GP13640 62 aa3.46□□□□□ -1.86
GTF3C1-212ENST00000570129 V9GYY9 64 aa3.44□□□□□ -1.86
GTF3C1-212ENST00000570129 DSTQ03001 7570 aaKnown RBP3.43□□□□□ -1.86
GTF3C1-212ENST00000570129 KRTAP12-3P60328 96 aa3.41□□□□□ -1.86
GTF3C1-212ENST00000570129 A6NED7 52 aa3.4□□□□□ -1.87
GTF3C1-212ENST00000570129 RPS28P62857 69 aaKnown RBP3.4□□□□□ -1.87
GTF3C1-212ENST00000570129 KRTAP25-1Q3LHN0 102 aa3.35□□□□□ -1.87
GTF3C1-212ENST00000570129 PP632Q6XCG6 107 aa3.34□□□□□ -1.87
GTF3C1-212ENST00000570129 K7ERS5 55 aa3.33□□□□□ -1.88
GTF3C1-212ENST00000570129 MT4P47944 62 aa3.27□□□□□ -1.89
GTF3C1-212ENST00000570129 MT3P25713 68 aa3.24□□□□□ -1.89
GTF3C1-212ENST00000570129 ROMO1P60602 79 aa3.24□□□□□ -1.89
GTF3C1-212ENST00000570129 CDC42SE1Q9NRR8 79 aa3.24□□□□□ -1.89
GTF3C1-212ENST00000570129 KRTAP5-4Q6L8H1 288 aa3.23□□□□□ -1.89
GTF3C1-212ENST00000570129 HMCN1Q96RW7 5635 aa3.21□□□□□ -1.9
GTF3C1-212ENST00000570129 KRTAP5-5Q701N2 237 aaPredicted RBP3.17□□□□□ -1.9
GTF3C1-212ENST00000570129 LCE3CQ5T5A8 94 aa3.16□□□□□ -1.9
GTF3C1-212ENST00000570129 GPR98Q8WXG9 6306 aa3.11□□□□□ -1.91
GTF3C1-212ENST00000570129 KRTAP9-6A8MVA2 160 aa3.1□□□□□ -1.91
GTF3C1-212ENST00000570129 LCE1FQ5T754 118 aa3.1□□□□□ -1.91
GTF3C1-212ENST00000570129 PRO0628Q9UI54 55 aa3.09□□□□□ -1.91
GTF3C1-212ENST00000570129 AHNAK2Q8IVF2 5795 aa3.06□□□□□ -1.92
GTF3C1-212ENST00000570129 KRTAP20-2Q3LI61 65 aa3.05□□□□□ -1.92
GTF3C1-212ENST00000570129 BRK1Q8WUW1 75 aa3.03□□□□□ -1.92
GTF3C1-212ENST00000570129 KRTAP6-1Q3LI64 71 aa3.01□□□□□ -1.93
GTF3C1-212ENST00000570129 SYNE1Q8NF91 8797 aaKnown RBP3□□□□□ -1.93
GTF3C1-212ENST00000570129 LUZP6Q538Z0 58 aa2.99□□□□□ -1.93
GTF3C1-212ENST00000570129 KRTAP12-4P60329 112 aa2.98□□□□□ -1.93
GTF3C1-212ENST00000570129 KRTAP5-10Q6L8G5 202 aa2.98□□□□□ -1.93
GTF3C1-212ENST00000570129 SPRR5A0A1B0GTR4 108 aa2.97□□□□□ -1.93
GTF3C1-212ENST00000570129 MT1AP04731 61 aa2.95□□□□□ -1.94
GTF3C1-212ENST00000570129 KRTAP5-2Q701N4 177 aa2.85□□□□□ -1.95
GTF3C1-212ENST00000570129 KRTAP6-2Q3LI66 62 aa2.84□□□□□ -1.95
GTF3C1-212ENST00000570129 PMAIP1Q13794 54 aa2.83□□□□□ -1.96
GTF3C1-212ENST00000570129 KRTAP5-7Q6L8G8 165 aa2.81□□□□□ -1.96
GTF3C1-212ENST00000570129 LCE1EQ5T753 118 aa2.74□□□□□ -1.97
GTF3C1-212ENST00000570129 KRTAP5-11Q6L8G4 156 aa2.74□□□□□ -1.97
GTF3C1-212ENST00000570129 KRTAP5-8O75690 187 aa2.68□□□□□ -1.98
GTF3C1-212ENST00000570129 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.68□□□□□ -1.98
GTF3C1-212ENST00000570129 LCE3EQ5T5B0 92 aa2.66□□□□□ -1.98
GTF3C1-212ENST00000570129 OBSCNQ5VST9 7968 aa2.59□□□□□ -1.99
GTF3C1-212ENST00000570129 KRTAP5-1Q6L8H4 278 aa2.56□□□□□ -2
GTF3C1-212ENST00000570129 KTN1-AS1Q86SY8 53 aa2.51□□□□□ -2.01
GTF3C1-212ENST00000570129 MUC5ACP98088 5654 aa2.51□□□□□ -2.01
GTF3C1-212ENST00000570129 MUC5BQ9HC84 5762 aaPredicted RBP2.51□□□□□ -2.01
GTF3C1-212ENST00000570129 AHNAKQ09666 5890 aaKnown RBP2.48□□□□□ -2.01
GTF3C1-212ENST00000570129 LCE1BQ5T7P3 118 aa2.35□□□□□ -2.03
GTF3C1-212ENST00000570129 LCE3DQ9BYE3 92 aa2.32□□□□□ -2.04
GTF3C1-212ENST00000570129 LCE1CQ5T751 118 aa2.24□□□□□ -2.05
GTF3C1-212ENST00000570129 KRTAP4-4Q9BYR3 166 aa2.21□□□□□ -2.06
GTF3C1-212ENST00000570129 KRTAP21-2Q3LI59 83 aa1.97□□□□□ -2.09
GTF3C1-212ENST00000570129 INE1O15225 51 aa1.82□□□□□ -2.12
GTF3C1-212ENST00000570129 PHGR1C9JFL3 82 aa1.76□□□□□ -2.13
GTF3C1-212ENST00000570129 PRM1P04553 51 aa1.71□□□□□ -2.14
GTF3C1-212ENST00000570129 MUC19Q7Z5P9 8384 aa1.6□□□□□ -2.15
GTF3C1-212ENST00000570129 KRTAP21-1Q3LI58 79 aa1.25□□□□□ -2.21
GTF3C1-212ENST00000570129 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 78.4 ms