RNA–Protein interactions for RNA: ENST00000570086.5

CMC2-222, Transcript of C-X9-C motif containing 2, human

TSL 3

Gene CMC2, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CMC2-222	ENST00000570086	KRTAP4-9	Q9BYQ8	210 aa		5.93	□□□□□ -1.46
CMC2-222	ENST00000570086	SYNE2	Q8WXH0	6885 aa	Known RBP	5.9	□□□□□ -1.46
CMC2-222	ENST00000570086	KRTAP19-5	Q3LI72	72 aa		5.86	□□□□□ -1.47
CMC2-222	ENST00000570086	KRTAP19-7	Q3SYF9	63 aa		5.86	□□□□□ -1.47
CMC2-222	ENST00000570086	SPRR2F	Q96RM1	72 aa		5.86	□□□□□ -1.47
CMC2-222	ENST00000570086	KTN1-AS1	Q86SY8	53 aa		5.84	□□□□□ -1.47
CMC2-222	ENST00000570086	KRTAP12-3	P60328	96 aa		5.81	□□□□□ -1.48
CMC2-222	ENST00000570086	MT1E	P04732	61 aa		5.79	□□□□□ -1.48
CMC2-222	ENST00000570086	PRAC1	Q96KF2	57 aa		5.77	□□□□□ -1.49
CMC2-222	ENST00000570086	LCE5A	Q5TCM9	118 aa		5.76	□□□□□ -1.49
CMC2-222	ENST00000570086	KRTAP4-2	Q9BYR5	136 aa		5.76	□□□□□ -1.49
CMC2-222	ENST00000570086	KRTAP4-11	Q9BYQ6	195 aa		5.74	□□□□□ -1.49
CMC2-222	ENST00000570086	LCE1A	Q5T7P2	110 aa		5.65	□□□□□ -1.5
CMC2-222	ENST00000570086	SPRR2E	P22531	72 aa		5.64	□□□□□ -1.51
CMC2-222	ENST00000570086	SPRR2B	P35325	72 aa		5.64	□□□□□ -1.51
CMC2-222	ENST00000570086	SPRR2A	P35326	72 aa		5.64	□□□□□ -1.51
CMC2-222	ENST00000570086	KRTAP15-1	Q3LI76	137 aa		5.63	□□□□□ -1.51
CMC2-222	ENST00000570086	KRTAP19-3	Q7Z4W3	81 aa		5.63	□□□□□ -1.51
CMC2-222	ENST00000570086	MT1L	Q93083	61 aa		5.63	□□□□□ -1.51
CMC2-222	ENST00000570086	MUC12	Q9UKN1	5478 aa		5.59	□□□□□ -1.51
CMC2-222	ENST00000570086	MT1G	P13640	62 aa		5.57	□□□□□ -1.52
CMC2-222	ENST00000570086	NEB	P20929	6669 aa		5.56	□□□□□ -1.52
CMC2-222	ENST00000570086	KRTAP20-1	Q3LI63	56 aa		5.49	□□□□□ -1.53
CMC2-222	ENST00000570086	SVIP	Q8NHG7	77 aa		5.49	□□□□□ -1.53
CMC2-222	ENST00000570086	MDN1	Q9NU22	5596 aa		5.47	□□□□□ -1.53
CMC2-222	ENST00000570086	MT1M	Q8N339	61 aa		5.47	□□□□□ -1.53
CMC2-222	ENST00000570086	SPRR2D	P22532	72 aa		5.45	□□□□□ -1.54
CMC2-222	ENST00000570086	LCE3C	Q5T5A8	94 aa		5.4	□□□□□ -1.54
CMC2-222	ENST00000570086	KRTAP4-3	Q9BYR4	195 aa		5.28	□□□□□ -1.56
CMC2-222	ENST00000570086	KRTAP2-3	P0C7H8	128 aa		5.26	□□□□□ -1.57
CMC2-222	ENST00000570086	KRTAP2-4	Q9BYR9	128 aa		5.26	□□□□□ -1.57
CMC2-222	ENST00000570086	SPRR5	A0A1B0GTR4	108 aa		5.13	□□□□□ -1.59
CMC2-222	ENST00000570086	KRTAP2-2	Q9BYT5	123 aa		5.13	□□□□□ -1.59
CMC2-222	ENST00000570086	KRTAP2-1	Q9BYU5	128 aa		5.13	□□□□□ -1.59
CMC2-222	ENST00000570086	KRTAP9-6	A8MVA2	160 aa		5.06	□□□□□ -1.6
CMC2-222	ENST00000570086	DST	Q03001	7570 aa	Known RBP	5.05	□□□□□ -1.6
CMC2-222	ENST00000570086	KRTAP5-3	Q6L8H2	238 aa		5.03	□□□□□ -1.6
CMC2-222	ENST00000570086	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.97	□□□□□ -1.61
CMC2-222	ENST00000570086	KRTAP5-4	Q6L8H1	288 aa		4.89	□□□□□ -1.63
CMC2-222	ENST00000570086	LUZP6	Q538Z0	58 aa		4.82	□□□□□ -1.64
CMC2-222	ENST00000570086	MT1A	P04731	61 aa		4.81	□□□□□ -1.64
CMC2-222	ENST00000570086	GPR98	Q8WXG9	6306 aa		4.8	□□□□□ -1.64
CMC2-222	ENST00000570086	KRTAP6-1	Q3LI64	71 aa		4.73	□□□□□ -1.65
CMC2-222	ENST00000570086	MT4	P47944	62 aa		4.7	□□□□□ -1.66
CMC2-222	ENST00000570086	KRTAP12-4	P60329	112 aa		4.7	□□□□□ -1.66
CMC2-222	ENST00000570086	SYNE1	Q8NF91	8797 aa	Known RBP	4.57	□□□□□ -1.68
CMC2-222	ENST00000570086	KRTAP20-2	Q3LI61	65 aa		4.56	□□□□□ -1.68
CMC2-222	ENST00000570086	HMCN1	Q96RW7	5635 aa		4.48	□□□□□ -1.69
CMC2-222	ENST00000570086	NDUFAF8	A1L188	74 aa		4.44	□□□□□ -1.7
CMC2-222	ENST00000570086	AHNAK2	Q8IVF2	5795 aa		4.4	□□□□□ -1.71
CMC2-222	ENST00000570086	KRTAP6-2	Q3LI66	62 aa		4.4	□□□□□ -1.71
CMC2-222	ENST00000570086	KRTAP5-2	Q701N4	177 aa		4.39	□□□□□ -1.71
CMC2-222	ENST00000570086	MT3	P25713	68 aa		4.37	□□□□□ -1.71
CMC2-222	ENST00000570086	KRTAP5-10	Q6L8G5	202 aa		4.3	□□□□□ -1.72
CMC2-222	ENST00000570086	KRTAP5-7	Q6L8G8	165 aa		4.16	□□□□□ -1.74
CMC2-222	ENST00000570086		A0A0A0MQY5	61 aa		4.05	□□□□□ -1.76
CMC2-222	ENST00000570086	LCE3D	Q9BYE3	92 aa		4.01	□□□□□ -1.77
CMC2-222	ENST00000570086	OBSCN	Q5VST9	7968 aa		3.9	□□□□□ -1.78
CMC2-222	ENST00000570086	LCE1E	Q5T753	118 aa		3.89	□□□□□ -1.79
CMC2-222	ENST00000570086	KRTAP5-8	O75690	187 aa		3.88	□□□□□ -1.79
CMC2-222	ENST00000570086	LCE3E	Q5T5B0	92 aa		3.88	□□□□□ -1.79
CMC2-222	ENST00000570086	KRTAP5-11	Q6L8G4	156 aa		3.85	□□□□□ -1.79
CMC2-222	ENST00000570086	KRTAP5-1	Q6L8H4	278 aa		3.82	□□□□□ -1.8
CMC2-222	ENST00000570086	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.81	□□□□□ -1.8
CMC2-222	ENST00000570086	INE1	O15225	51 aa		3.72	□□□□□ -1.81
CMC2-222	ENST00000570086	AHNAK	Q09666	5890 aa	Known RBP	3.67	□□□□□ -1.82
CMC2-222	ENST00000570086	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.67	□□□□□ -1.82
CMC2-222	ENST00000570086	MUC5AC	P98088	5654 aa		3.66	□□□□□ -1.82
CMC2-222	ENST00000570086	LCE1C	Q5T751	118 aa		3.6	□□□□□ -1.83
CMC2-222	ENST00000570086	LCE1B	Q5T7P3	118 aa		3.6	□□□□□ -1.83
CMC2-222	ENST00000570086	LCE1F	Q5T754	118 aa		3.41	□□□□□ -1.86
CMC2-222	ENST00000570086	PRM1	P04553	51 aa		3.22	□□□□□ -1.89
CMC2-222	ENST00000570086	KRTAP4-4	Q9BYR3	166 aa		3.16	□□□□□ -1.9
CMC2-222	ENST00000570086	KRTAP21-2	Q3LI59	83 aa		3.11	□□□□□ -1.91
CMC2-222	ENST00000570086	PHGR1	C9JFL3	82 aa		2.75	□□□□□ -1.97
CMC2-222	ENST00000570086	MUC19	Q7Z5P9	8384 aa		2.34	□□□□□ -2.04
CMC2-222	ENST00000570086	KRTAP21-1	Q3LI58	79 aa		1.93	□□□□□ -2.1
CMC2-222	ENST00000570086	MUC16	Q8WXI7	14507 aa		1.77	□□□□□ -2.13

Retrieved 78 of 20,778 RNA–protein pairs in 169.5 ms