RNA–Protein interactions for RNA: ENST00000569945.1

GCOM1-213, Transcript of GRINL1A complex locus 1, humanhuman

Gene GCOM1, Length 2,335 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-213ENST00000569945 KRTAP2-4Q9BYR9 128 aa5.08□□□□□ -1.6
GCOM1-213ENST00000569945 KRTAP2-1Q9BYU5 128 aa5.08□□□□□ -1.6
GCOM1-213ENST00000569945 KRTAP9-6A8MVA2 160 aa5.05□□□□□ -1.6
GCOM1-213ENST00000569945 KRTAP9-7A8MTY7 169 aa5□□□□□ -1.61
GCOM1-213ENST00000569945 MUC12Q9UKN1 5478 aa4.98□□□□□ -1.61
GCOM1-213ENST00000569945 KRTAP6-3Q3LI67 103 aa4.96□□□□□ -1.62
GCOM1-213ENST00000569945 KRTAP19-5Q3LI72 72 aa4.96□□□□□ -1.62
GCOM1-213ENST00000569945 KRTAP5-9P26371 169 aa4.92□□□□□ -1.62
GCOM1-213ENST00000569945 SPRR2FQ96RM1 72 aa4.92□□□□□ -1.62
GCOM1-213ENST00000569945 MDN1Q9NU22 5596 aa4.91□□□□□ -1.62
GCOM1-213ENST00000569945 KRTAP19-7Q3SYF9 63 aa4.89□□□□□ -1.63
GCOM1-213ENST00000569945 MT1EP04732 61 aa4.8□□□□□ -1.64
GCOM1-213ENST00000569945 NEBP20929 6669 aa4.8□□□□□ -1.64
GCOM1-213ENST00000569945 LCE1AQ5T7P2 110 aa4.74□□□□□ -1.65
GCOM1-213ENST00000569945 SPRR2EP22531 72 aa4.73□□□□□ -1.65
GCOM1-213ENST00000569945 SPRR2BP35325 72 aa4.73□□□□□ -1.65
GCOM1-213ENST00000569945 SPRR2AP35326 72 aa4.73□□□□□ -1.65
GCOM1-213ENST00000569945 KRTAP4-7Q9BYR0 210 aa4.72□□□□□ -1.65
GCOM1-213ENST00000569945 MT1LQ93083 61 aa4.66□□□□□ -1.66
GCOM1-213ENST00000569945 KRTAP19-3Q7Z4W3 81 aa4.65□□□□□ -1.66
GCOM1-213ENST00000569945 LCE5AQ5TCM9 118 aa4.62□□□□□ -1.67
GCOM1-213ENST00000569945 KRTAP19-4Q3LI73 84 aa4.61□□□□□ -1.67
GCOM1-213ENST00000569945 KRTAP12-4P60329 112 aa4.58□□□□□ -1.68
GCOM1-213ENST00000569945 MT1GP13640 62 aa4.56□□□□□ -1.68
GCOM1-213ENST00000569945 SPRR2DP22532 72 aa4.56□□□□□ -1.68
GCOM1-213ENST00000569945 MT1MQ8N339 61 aa4.55□□□□□ -1.68
GCOM1-213ENST00000569945 DSTQ03001 7570 aaKnown RBP4.54□□□□□ -1.68
GCOM1-213ENST00000569945 KRTAP4-3Q9BYR4 195 aa4.53□□□□□ -1.68
GCOM1-213ENST00000569945 LCE3BQ5TA77 95 aa4.4□□□□□ -1.7
GCOM1-213ENST00000569945 KRTAP20-1Q3LI63 56 aa4.4□□□□□ -1.71
GCOM1-213ENST00000569945 LOC100996750A0A140TA64 210 aa4.37□□□□□ -1.71
GCOM1-213ENST00000569945 KRTAP2-2Q9BYT5 123 aa4.28□□□□□ -1.72
GCOM1-213ENST00000569945 PRM1P04553 51 aa4.13□□□□□ -1.75
GCOM1-213ENST00000569945 KRTAP5-5Q701N2 237 aaPredicted RBP4.13□□□□□ -1.75
GCOM1-213ENST00000569945 KRTAP4-9Q9BYQ8 210 aa4.13□□□□□ -1.75
GCOM1-213ENST00000569945 MT1AP04731 61 aa4.11□□□□□ -1.75
GCOM1-213ENST00000569945 KRTAP5-4Q6L8H1 288 aa4.05□□□□□ -1.76
GCOM1-213ENST00000569945 LCE3EQ5T5B0 92 aa4.02□□□□□ -1.77
GCOM1-213ENST00000569945 SYNE1Q8NF91 8797 aaKnown RBP4.02□□□□□ -1.77
GCOM1-213ENST00000569945 MT4P47944 62 aa4.01□□□□□ -1.77
GCOM1-213ENST00000569945 LCE3DQ9BYE3 92 aa4.01□□□□□ -1.77
GCOM1-213ENST00000569945 LCE4AQ5TA78 99 aa3.99□□□□□ -1.77
GCOM1-213ENST00000569945 LCE1DQ5T752 114 aa3.97□□□□□ -1.77
GCOM1-213ENST00000569945 KRTAP6-1Q3LI64 71 aa3.96□□□□□ -1.77
GCOM1-213ENST00000569945 KRTAP4-6Q9BYQ5 205 aa3.96□□□□□ -1.77
GCOM1-213ENST00000569945 HMCN1Q96RW7 5635 aa3.96□□□□□ -1.78
GCOM1-213ENST00000569945 KRTAP6-2Q3LI66 62 aa3.83□□□□□ -1.8
GCOM1-213ENST00000569945 KRTAP20-2Q3LI61 65 aa3.82□□□□□ -1.8
GCOM1-213ENST00000569945 KRTAP9-4Q9BYQ2 154 aa3.78□□□□□ -1.8
GCOM1-213ENST00000569945 KRTAP5-3Q6L8H2 238 aa3.69□□□□□ -1.82
GCOM1-213ENST00000569945 LCE1EQ5T753 118 aa3.67□□□□□ -1.82
GCOM1-213ENST00000569945 KRTAP5-2Q701N4 177 aa3.62□□□□□ -1.83
GCOM1-213ENST00000569945 AHNAK2Q8IVF2 5795 aa3.62□□□□□ -1.83
GCOM1-213ENST00000569945 MT3P25713 68 aa3.56□□□□□ -1.84
GCOM1-213ENST00000569945 OBSCNQ5VST9 7968 aa3.54□□□□□ -1.84
GCOM1-213ENST00000569945 GPR98Q8WXG9 6306 aa3.53□□□□□ -1.85
GCOM1-213ENST00000569945 KRTAP5-10Q6L8G5 202 aa3.44□□□□□ -1.86
GCOM1-213ENST00000569945 KRTAP4-11Q9BYQ6 195 aa3.37□□□□□ -1.87
GCOM1-213ENST00000569945 KRTAP4-12Q9BQ66 201 aa3.3□□□□□ -1.88
GCOM1-213ENST00000569945 KRTAP5-8O75690 187 aa3.26□□□□□ -1.89
GCOM1-213ENST00000569945 KRTAP9-9Q9BYP9 154 aa3.23□□□□□ -1.89
GCOM1-213ENST00000569945 KRTAP5-7Q6L8G8 165 aa3.21□□□□□ -1.9
GCOM1-213ENST00000569945 KRTAP5-1Q6L8H4 278 aa3.2□□□□□ -1.9
GCOM1-213ENST00000569945 MUC5ACP98088 5654 aa3.14□□□□□ -1.91
GCOM1-213ENST00000569945 LCE1FQ5T754 118 aa3.1□□□□□ -1.91
GCOM1-213ENST00000569945 LCE1BQ5T7P3 118 aa3.03□□□□□ -1.92
GCOM1-213ENST00000569945 KRTAP4-2Q9BYR5 136 aa3.01□□□□□ -1.93
GCOM1-213ENST00000569945 MUC5BQ9HC84 5762 aaPredicted RBP2.96□□□□□ -1.94
GCOM1-213ENST00000569945 LCE1CQ5T751 118 aa2.93□□□□□ -1.94
GCOM1-213ENST00000569945 AHNAKQ09666 5890 aaKnown RBP2.81□□□□□ -1.96
GCOM1-213ENST00000569945 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.71□□□□□ -1.97
GCOM1-213ENST00000569945 KRTAP21-1Q3LI58 79 aa2.71□□□□□ -1.98
GCOM1-213ENST00000569945 KRTAP5-11Q6L8G4 156 aa2.62□□□□□ -1.99
GCOM1-213ENST00000569945 KRTAP21-2Q3LI59 83 aa2.59□□□□□ -1.99
GCOM1-213ENST00000569945 MUC19Q7Z5P9 8384 aa2.51□□□□□ -2.01
GCOM1-213ENST00000569945 KRTAP4-4Q9BYR3 166 aa2.39□□□□□ -2.03
GCOM1-213ENST00000569945 PHGR1C9JFL3 82 aa2.26□□□□□ -2.05
GCOM1-213ENST00000569945 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 136.4 ms