RNA–Protein interactions for RNA: ENST00000569768.1

THUMPD1-204, Transcript of THUMP domain containing 1, humanhuman

TSL 2

Gene THUMPD1, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-204ENST00000569768 SPRR2FQ96RM1 72 aa5.43□□□□□ -1.54
THUMPD1-204ENST00000569768 KRTAP19-4Q3LI73 84 aa5.32□□□□□ -1.56
THUMPD1-204ENST00000569768 KRTAP15-1Q3LI76 137 aa5.32□□□□□ -1.56
THUMPD1-204ENST00000569768 MT1LQ93083 61 aa5.28□□□□□ -1.56
THUMPD1-204ENST00000569768 KRTAP19-3Q7Z4W3 81 aa5.27□□□□□ -1.57
THUMPD1-204ENST00000569768 KRTAP20-1Q3LI63 56 aa5.25□□□□□ -1.57
THUMPD1-204ENST00000569768 LCE1AQ5T7P2 110 aa5.25□□□□□ -1.57
THUMPD1-204ENST00000569768 SVIPQ8NHG7 77 aa5.25□□□□□ -1.57
THUMPD1-204ENST00000569768 MDN1Q9NU22 5596 aa5.24□□□□□ -1.57
THUMPD1-204ENST00000569768 MT1GP13640 62 aa5.23□□□□□ -1.57
THUMPD1-204ENST00000569768 SPRR2EP22531 72 aa5.21□□□□□ -1.58
THUMPD1-204ENST00000569768 SPRR2BP35325 72 aa5.21□□□□□ -1.58
THUMPD1-204ENST00000569768 SPRR2AP35326 72 aa5.21□□□□□ -1.58
THUMPD1-204ENST00000569768 LCE5AQ5TCM9 118 aa5.21□□□□□ -1.58
THUMPD1-204ENST00000569768 MT1MQ8N339 61 aa5.12□□□□□ -1.59
THUMPD1-204ENST00000569768 LCE3CQ5T5A8 94 aa5.09□□□□□ -1.59
THUMPD1-204ENST00000569768 SPRR2DP22532 72 aa5.03□□□□□ -1.6
THUMPD1-204ENST00000569768 KRTAP2-3P0C7H8 128 aa4.98□□□□□ -1.61
THUMPD1-204ENST00000569768 KRTAP4-7Q9BYR0 210 aa4.98□□□□□ -1.61
THUMPD1-204ENST00000569768 KRTAP2-4Q9BYR9 128 aa4.98□□□□□ -1.61
THUMPD1-204ENST00000569768 SPRR5A0A1B0GTR4 108 aa4.93□□□□□ -1.62
THUMPD1-204ENST00000569768 KRTAP4-12Q9BQ66 201 aa4.91□□□□□ -1.62
THUMPD1-204ENST00000569768 KRTAP4-3Q9BYR4 195 aa4.91□□□□□ -1.62
THUMPD1-204ENST00000569768 LCE3BQ5TA77 95 aa4.85□□□□□ -1.63
THUMPD1-204ENST00000569768 H3BS24 57 aa4.84□□□□□ -1.63
THUMPD1-204ENST00000569768 KRTAP2-2Q9BYT5 123 aa4.78□□□□□ -1.64
THUMPD1-204ENST00000569768 KRTAP2-1Q9BYU5 128 aa4.78□□□□□ -1.64
THUMPD1-204ENST00000569768 KRTAP9-6A8MVA2 160 aa4.77□□□□□ -1.65
THUMPD1-204ENST00000569768 DSTQ03001 7570 aaKnown RBP4.76□□□□□ -1.65
THUMPD1-204ENST00000569768 GPR98Q8WXG9 6306 aa4.75□□□□□ -1.65
THUMPD1-204ENST00000569768 KRTAP9-9Q9BYP9 154 aa4.72□□□□□ -1.65
THUMPD1-204ENST00000569768 KRTAP9-4Q9BYQ2 154 aa4.72□□□□□ -1.65
THUMPD1-204ENST00000569768 KRTAP5-5Q701N2 237 aaPredicted RBP4.66□□□□□ -1.66
THUMPD1-204ENST00000569768 LUZP6Q538Z0 58 aa4.61□□□□□ -1.67
THUMPD1-204ENST00000569768 KRTAP5-4Q6L8H1 288 aa4.58□□□□□ -1.68
THUMPD1-204ENST00000569768 LCE4AQ5TA78 99 aa4.55□□□□□ -1.68
THUMPD1-204ENST00000569768 MT1AP04731 61 aa4.53□□□□□ -1.68
THUMPD1-204ENST00000569768 LCE1DQ5T752 114 aa4.52□□□□□ -1.69
THUMPD1-204ENST00000569768 KRTAP4-9Q9BYQ8 210 aa4.48□□□□□ -1.69
THUMPD1-204ENST00000569768 KRTAP6-1Q3LI64 71 aa4.42□□□□□ -1.7
THUMPD1-204ENST00000569768 HMCN1Q96RW7 5635 aa4.39□□□□□ -1.71
THUMPD1-204ENST00000569768 KRTAP12-4P60329 112 aa4.37□□□□□ -1.71
THUMPD1-204ENST00000569768 AHNAK2Q8IVF2 5795 aa4.36□□□□□ -1.71
THUMPD1-204ENST00000569768 SYNE1Q8NF91 8797 aaKnown RBP4.34□□□□□ -1.71
THUMPD1-204ENST00000569768 MT4P47944 62 aa4.32□□□□□ -1.72
THUMPD1-204ENST00000569768 NDUFAF8A1L188 74 aa4.28□□□□□ -1.72
THUMPD1-204ENST00000569768 KRTAP20-2Q3LI61 65 aa4.25□□□□□ -1.73
THUMPD1-204ENST00000569768 KRTAP4-2Q9BYR5 136 aa4.25□□□□□ -1.73
THUMPD1-204ENST00000569768 KRTAP4-11Q9BYQ6 195 aa4.24□□□□□ -1.73
THUMPD1-204ENST00000569768 KRTAP5-10Q6L8G5 202 aa4.14□□□□□ -1.75
THUMPD1-204ENST00000569768 KRTAP5-3Q6L8H2 238 aa4.12□□□□□ -1.75
THUMPD1-204ENST00000569768 KRTAP5-2Q701N4 177 aa4.12□□□□□ -1.75
THUMPD1-204ENST00000569768 MT3P25713 68 aa4.11□□□□□ -1.75
THUMPD1-204ENST00000569768 KRTAP6-2Q3LI66 62 aa4.1□□□□□ -1.75
THUMPD1-204ENST00000569768 KRTAP5-7Q6L8G8 165 aa3.99□□□□□ -1.77
THUMPD1-204ENST00000569768 LCE3DQ9BYE3 92 aa3.79□□□□□ -1.8
THUMPD1-204ENST00000569768 A0A0A0MQY5 61 aa3.77□□□□□ -1.81
THUMPD1-204ENST00000569768 OBSCNQ5VST9 7968 aa3.73□□□□□ -1.81
THUMPD1-204ENST00000569768 AHNAKQ09666 5890 aaKnown RBP3.71□□□□□ -1.82
THUMPD1-204ENST00000569768 LCE3EQ5T5B0 92 aa3.67□□□□□ -1.82
THUMPD1-204ENST00000569768 LCE1EQ5T753 118 aa3.67□□□□□ -1.82
THUMPD1-204ENST00000569768 INE1O15225 51 aa3.63□□□□□ -1.83
THUMPD1-204ENST00000569768 MUC5BQ9HC84 5762 aaPredicted RBP3.63□□□□□ -1.83
THUMPD1-204ENST00000569768 KRTAP5-8O75690 187 aa3.6□□□□□ -1.83
THUMPD1-204ENST00000569768 MUC5ACP98088 5654 aa3.59□□□□□ -1.83
THUMPD1-204ENST00000569768 KRTAP5-1Q6L8H4 278 aa3.56□□□□□ -1.84
THUMPD1-204ENST00000569768 LCE1CQ5T751 118 aa3.39□□□□□ -1.87
THUMPD1-204ENST00000569768 LCE1BQ5T7P3 118 aa3.39□□□□□ -1.87
THUMPD1-204ENST00000569768 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.19□□□□□ -1.9
THUMPD1-204ENST00000569768 PRM1P04553 51 aa3.06□□□□□ -1.92
THUMPD1-204ENST00000569768 KRTAP5-11Q6L8G4 156 aa3.02□□□□□ -1.93
THUMPD1-204ENST00000569768 KRTAP21-2Q3LI59 83 aa2.92□□□□□ -1.94
THUMPD1-204ENST00000569768 LCE1FQ5T754 118 aa2.83□□□□□ -1.96
THUMPD1-204ENST00000569768 PHGR1C9JFL3 82 aa2.57□□□□□ -2
THUMPD1-204ENST00000569768 KRTAP4-4Q9BYR3 166 aa2.5□□□□□ -2.01
THUMPD1-204ENST00000569768 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
THUMPD1-204ENST00000569768 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
THUMPD1-204ENST00000569768 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 127.5 ms