RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 PRO0628Q9UI54 55 aa4.92□□□□□ -1.62
SPG7-221ENST00000569720 GPR98Q8WXG9 6306 aa4.91□□□□□ -1.62
SPG7-221ENST00000569720 KRTAP19-7Q3SYF9 63 aa4.91□□□□□ -1.62
SPG7-221ENST00000569720 C10orf95Q9H7T3 257 aa4.91□□□□□ -1.62
SPG7-221ENST00000569720 KRTAP19-3Q7Z4W3 81 aa4.9□□□□□ -1.63
SPG7-221ENST00000569720 MT1EP04732 61 aa4.89□□□□□ -1.63
SPG7-221ENST00000569720 KRTAP25-1Q3LHN0 102 aa4.88□□□□□ -1.63
SPG7-221ENST00000569720 KRTAP4-9Q9BYQ8 210 aa4.86□□□□□ -1.63
SPG7-221ENST00000569720 ROMO1P60602 79 aa4.85□□□□□ -1.63
SPG7-221ENST00000569720 KRTAP23-1A1A580 65 aa4.8□□□□□ -1.64
SPG7-221ENST00000569720 MT1GP13640 62 aa4.78□□□□□ -1.64
SPG7-221ENST00000569720 PP632Q6XCG6 107 aa4.77□□□□□ -1.65
SPG7-221ENST00000569720 KRTAP19-5Q3LI72 72 aa4.76□□□□□ -1.65
SPG7-221ENST00000569720 PMAIP1Q13794 54 aa4.75□□□□□ -1.65
SPG7-221ENST00000569720 LCE1DQ5T752 114 aa4.73□□□□□ -1.65
SPG7-221ENST00000569720 LCE4AQ5TA78 99 aa4.71□□□□□ -1.66
SPG7-221ENST00000569720 HMCN1Q96RW7 5635 aa4.69□□□□□ -1.66
SPG7-221ENST00000569720 MT1MQ8N339 61 aa4.67□□□□□ -1.66
SPG7-221ENST00000569720 MT4P47944 62 aa4.66□□□□□ -1.66
SPG7-221ENST00000569720 MT1LQ93083 61 aa4.65□□□□□ -1.67
SPG7-221ENST00000569720 LCE3AQ5TA76 89 aa4.62□□□□□ -1.67
SPG7-221ENST00000569720 AHNAK2Q8IVF2 5795 aa4.59□□□□□ -1.67
SPG7-221ENST00000569720 KRTAP5-4Q6L8H1 288 aa4.55□□□□□ -1.68
SPG7-221ENST00000569720 KRTAP4-3Q9BYR4 195 aa4.55□□□□□ -1.68
SPG7-221ENST00000569720 KRTAP19-4Q3LI73 84 aa4.54□□□□□ -1.68
SPG7-221ENST00000569720 KRTAP12-3P60328 96 aa4.52□□□□□ -1.69
SPG7-221ENST00000569720 KRTAP4-6Q9BYQ5 205 aa4.49□□□□□ -1.69
SPG7-221ENST00000569720 KRTAP5-10Q6L8G5 202 aa4.48□□□□□ -1.69
SPG7-221ENST00000569720 KTN1-AS1Q86SY8 53 aa4.48□□□□□ -1.69
SPG7-221ENST00000569720 KRTAP15-1Q3LI76 137 aa4.4□□□□□ -1.71
SPG7-221ENST00000569720 KRTAP4-7Q9BYR0 210 aa4.39□□□□□ -1.71
SPG7-221ENST00000569720 KRTAP5-3Q6L8H2 238 aa4.34□□□□□ -1.71
SPG7-221ENST00000569720 KRTAP5-7Q6L8G8 165 aa4.33□□□□□ -1.72
SPG7-221ENST00000569720 KRTAP20-2Q3LI61 65 aa4.32□□□□□ -1.72
SPG7-221ENST00000569720 PRAC1Q96KF2 57 aa4.31□□□□□ -1.72
SPG7-221ENST00000569720 SPRR5A0A1B0GTR4 108 aa4.29□□□□□ -1.72
SPG7-221ENST00000569720 KRTAP12-4P60329 112 aa4.28□□□□□ -1.72
SPG7-221ENST00000569720 KRTAP5-5Q701N2 237 aaPredicted RBP4.28□□□□□ -1.72
SPG7-221ENST00000569720 H3BS24 57 aa4.27□□□□□ -1.73
SPG7-221ENST00000569720 LCE3CQ5T5A8 94 aa4.21□□□□□ -1.74
SPG7-221ENST00000569720 SYNE1Q8NF91 8797 aaKnown RBP4.19□□□□□ -1.74
SPG7-221ENST00000569720 LOC100996750A0A140TA64 210 aa4.17□□□□□ -1.74
SPG7-221ENST00000569720 KRTAP4-11Q9BYQ6 195 aa3.99□□□□□ -1.77
SPG7-221ENST00000569720 MT1AP04731 61 aa3.96□□□□□ -1.78
SPG7-221ENST00000569720 KRTAP5-2Q701N4 177 aa3.95□□□□□ -1.78
SPG7-221ENST00000569720 KRTAP6-1Q3LI64 71 aa3.93□□□□□ -1.78
SPG7-221ENST00000569720 KRTAP9-6A8MVA2 160 aa3.85□□□□□ -1.79
SPG7-221ENST00000569720 KRTAP9-4Q9BYQ2 154 aa3.85□□□□□ -1.79
SPG7-221ENST00000569720 AHNAKQ09666 5890 aaKnown RBP3.85□□□□□ -1.79
SPG7-221ENST00000569720 KRTAP5-8O75690 187 aa3.84□□□□□ -1.79
SPG7-221ENST00000569720 MUC5BQ9HC84 5762 aaPredicted RBP3.82□□□□□ -1.8
SPG7-221ENST00000569720 KRTAP6-2Q3LI66 62 aa3.8□□□□□ -1.8
SPG7-221ENST00000569720 MUC5ACP98088 5654 aa3.8□□□□□ -1.8
SPG7-221ENST00000569720 A0A0A0MQY5 61 aa3.79□□□□□ -1.8
SPG7-221ENST00000569720 LUZP6Q538Z0 58 aa3.78□□□□□ -1.8
SPG7-221ENST00000569720 OBSCNQ5VST9 7968 aa3.77□□□□□ -1.81
SPG7-221ENST00000569720 KRTAP9-9Q9BYP9 154 aa3.72□□□□□ -1.81
SPG7-221ENST00000569720 MT3P25713 68 aa3.65□□□□□ -1.83
SPG7-221ENST00000569720 NDUFAF8A1L188 74 aa3.58□□□□□ -1.84
SPG7-221ENST00000569720 KRTAP5-1Q6L8H4 278 aa3.57□□□□□ -1.84
SPG7-221ENST00000569720 LCE1EQ5T753 118 aa3.39□□□□□ -1.87
SPG7-221ENST00000569720 LCE1BQ5T7P3 118 aa3.21□□□□□ -1.9
SPG7-221ENST00000569720 KRTAP4-2Q9BYR5 136 aa3.19□□□□□ -1.9
SPG7-221ENST00000569720 LCE1CQ5T751 118 aa3.14□□□□□ -1.91
SPG7-221ENST00000569720 LCE3DQ9BYE3 92 aa3.14□□□□□ -1.91
SPG7-221ENST00000569720 INE1O15225 51 aa3.06□□□□□ -1.92
SPG7-221ENST00000569720 LCE3EQ5T5B0 92 aa3.04□□□□□ -1.92
SPG7-221ENST00000569720 KRTAP4-12Q9BQ66 201 aa2.96□□□□□ -1.94
SPG7-221ENST00000569720 KRTAP5-11Q6L8G4 156 aa2.85□□□□□ -1.95
SPG7-221ENST00000569720 LCE1FQ5T754 118 aa2.84□□□□□ -1.95
SPG7-221ENST00000569720 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.82□□□□□ -1.96
SPG7-221ENST00000569720 PHGR1C9JFL3 82 aa2.64□□□□□ -1.99
SPG7-221ENST00000569720 KRTAP21-2Q3LI59 83 aa2.59□□□□□ -1.99
SPG7-221ENST00000569720 PRM1P04553 51 aa2.44□□□□□ -2.02
SPG7-221ENST00000569720 KRTAP4-4Q9BYR3 166 aa2.4□□□□□ -2.03
SPG7-221ENST00000569720 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
SPG7-221ENST00000569720 KRTAP21-1Q3LI58 79 aa2.01□□□□□ -2.09
SPG7-221ENST00000569720 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 89.7 ms