RNA–Protein interactions for RNA: ENST00000569706.5

RHOT2-223, Transcript of ras homolog family member T2, human

TSL 3

Gene RHOT2, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RHOT2-223	ENST00000569706	C10orf95	Q9H7T3	257 aa		8.88	□□□□□ -0.99
RHOT2-223	ENST00000569706	KRTAP19-3	Q7Z4W3	81 aa		8.86	□□□□□ -0.99
RHOT2-223	ENST00000569706	TNP1	P09430	55 aa		8.83	□□□□□ -1
RHOT2-223	ENST00000569706	KRTAP4-9	Q9BYQ8	210 aa		8.74	□□□□□ -1.01
RHOT2-223	ENST00000569706	KRTAP25-1	Q3LHN0	102 aa		8.64	□□□□□ -1.03
RHOT2-223	ENST00000569706	MT1G	P13640	62 aa		8.63	□□□□□ -1.03
RHOT2-223	ENST00000569706	KRTAP19-5	Q3LI72	72 aa		8.59	□□□□□ -1.03
RHOT2-223	ENST00000569706	LCE1D	Q5T752	114 aa		8.55	□□□□□ -1.04
RHOT2-223	ENST00000569706	LCE3A	Q5TA76	89 aa		8.52	□□□□□ -1.05
RHOT2-223	ENST00000569706	HMCN1	Q96RW7	5635 aa		8.5	□□□□□ -1.05
RHOT2-223	ENST00000569706	ROMO1	P60602	79 aa		8.5	□□□□□ -1.05
RHOT2-223	ENST00000569706	PP632	Q6XCG6	107 aa		8.5	□□□□□ -1.05
RHOT2-223	ENST00000569706	BRK1	Q8WUW1	75 aa		8.5	□□□□□ -1.05
RHOT2-223	ENST00000569706	LCE4A	Q5TA78	99 aa		8.49	□□□□□ -1.05
RHOT2-223	ENST00000569706	MT1M	Q8N339	61 aa		8.47	□□□□□ -1.05
RHOT2-223	ENST00000569706	MT1L	Q93083	61 aa		8.43	□□□□□ -1.06
RHOT2-223	ENST00000569706	KRTAP23-1	A1A580	65 aa		8.38	□□□□□ -1.07
RHOT2-223	ENST00000569706	MT4	P47944	62 aa		8.34	□□□□□ -1.07
RHOT2-223	ENST00000569706	KRTAP5-4	Q6L8H1	288 aa		8.34	□□□□□ -1.07
RHOT2-223	ENST00000569706	AHNAK2	Q8IVF2	5795 aa		8.32	□□□□□ -1.08
RHOT2-223	ENST00000569706	KRTAP4-3	Q9BYR4	195 aa		8.24	□□□□□ -1.09
RHOT2-223	ENST00000569706	KRTAP12-3	P60328	96 aa		8.23	□□□□□ -1.09
RHOT2-223	ENST00000569706	KRTAP5-10	Q6L8G5	202 aa		8.16	□□□□□ -1.1
RHOT2-223	ENST00000569706	KRTAP4-6	Q9BYQ5	205 aa		8.15	□□□□□ -1.1
RHOT2-223	ENST00000569706	PMAIP1	Q13794	54 aa		8.02	□□□□□ -1.13
RHOT2-223	ENST00000569706	PRO0628	Q9UI54	55 aa		7.97	□□□□□ -1.13
RHOT2-223	ENST00000569706	KRTAP4-7	Q9BYR0	210 aa		7.96	□□□□□ -1.14
RHOT2-223	ENST00000569706	KRTAP19-4	Q3LI73	84 aa		7.93	□□□□□ -1.14
RHOT2-223	ENST00000569706	KRTAP15-1	Q3LI76	137 aa		7.9	□□□□□ -1.14
RHOT2-223	ENST00000569706	KRTAP5-7	Q6L8G8	165 aa		7.89	□□□□□ -1.15
RHOT2-223	ENST00000569706	KRTAP5-3	Q6L8H2	238 aa		7.88	□□□□□ -1.15
RHOT2-223	ENST00000569706	KRTAP5-5	Q701N2	237 aa	Predicted RBP	7.87	□□□□□ -1.15
RHOT2-223	ENST00000569706	KRTAP20-2	Q3LI61	65 aa		7.84	□□□□□ -1.15
RHOT2-223	ENST00000569706	SPRR5	A0A1B0GTR4	108 aa		7.79	□□□□□ -1.16
RHOT2-223	ENST00000569706	SYNE1	Q8NF91	8797 aa	Known RBP	7.67	□□□□□ -1.18
RHOT2-223	ENST00000569706	KRTAP12-4	P60329	112 aa		7.63	□□□□□ -1.19
RHOT2-223	ENST00000569706	LCE3C	Q5T5A8	94 aa		7.63	□□□□□ -1.19
RHOT2-223	ENST00000569706	LOC100996750	A0A140TA64	210 aa		7.55	□□□□□ -1.2
RHOT2-223	ENST00000569706	PRAC1	Q96KF2	57 aa		7.52	□□□□□ -1.21
RHOT2-223	ENST00000569706	KTN1-AS1	Q86SY8	53 aa		7.49	□□□□□ -1.21
RHOT2-223	ENST00000569706	KRTAP5-2	Q701N4	177 aa		7.27	□□□□□ -1.25
RHOT2-223	ENST00000569706	KRTAP4-11	Q9BYQ6	195 aa		7.23	□□□□□ -1.25
RHOT2-223	ENST00000569706	MT1A	P04731	61 aa		7.17	□□□□□ -1.26
RHOT2-223	ENST00000569706	KRTAP6-1	Q3LI64	71 aa		7.13	□□□□□ -1.27
RHOT2-223	ENST00000569706	KRTAP9-6	A8MVA2	160 aa		7.11	□□□□□ -1.27
RHOT2-223	ENST00000569706	SVIP	Q8NHG7	77 aa		7.09	□□□□□ -1.27
RHOT2-223	ENST00000569706	KRTAP5-8	O75690	187 aa		7.02	□□□□□ -1.29
RHOT2-223	ENST00000569706	KRTAP9-4	Q9BYQ2	154 aa		6.96	□□□□□ -1.3
RHOT2-223	ENST00000569706	MUC5B	Q9HC84	5762 aa	Predicted RBP	6.91	□□□□□ -1.3
RHOT2-223	ENST00000569706	AHNAK	Q09666	5890 aa	Known RBP	6.91	□□□□□ -1.3
RHOT2-223	ENST00000569706	MUC5AC	P98088	5654 aa		6.89	□□□□□ -1.31
RHOT2-223	ENST00000569706	OBSCN	Q5VST9	7968 aa		6.87	□□□□□ -1.31
RHOT2-223	ENST00000569706	KRTAP6-2	Q3LI66	62 aa		6.86	□□□□□ -1.31
RHOT2-223	ENST00000569706	KRTAP9-9	Q9BYP9	154 aa		6.64	□□□□□ -1.35
RHOT2-223	ENST00000569706	KRTAP5-1	Q6L8H4	278 aa		6.56	□□□□□ -1.36
RHOT2-223	ENST00000569706	MT3	P25713	68 aa		6.55	□□□□□ -1.36
RHOT2-223	ENST00000569706	LUZP6	Q538Z0	58 aa		6.39	□□□□□ -1.39
RHOT2-223	ENST00000569706	LCE1E	Q5T753	118 aa		6.17	□□□□□ -1.42
RHOT2-223	ENST00000569706	KRTAP4-2	Q9BYR5	136 aa		5.85	□□□□□ -1.47
RHOT2-223	ENST00000569706	LCE1C	Q5T751	118 aa		5.71	□□□□□ -1.5
RHOT2-223	ENST00000569706	LCE1B	Q5T7P3	118 aa		5.71	□□□□□ -1.5
RHOT2-223	ENST00000569706	LCE3D	Q9BYE3	92 aa		5.63	□□□□□ -1.51
RHOT2-223	ENST00000569706	NDUFAF8	A1L188	74 aa		5.61	□□□□□ -1.51
RHOT2-223	ENST00000569706	LCE3E	Q5T5B0	92 aa		5.4	□□□□□ -1.54
RHOT2-223	ENST00000569706	KRTAP4-12	Q9BQ66	201 aa		5.31	□□□□□ -1.56
RHOT2-223	ENST00000569706	KRTAP5-11	Q6L8G4	156 aa		5.21	□□□□□ -1.58
RHOT2-223	ENST00000569706	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	5.21	□□□□□ -1.58
RHOT2-223	ENST00000569706	LCE1F	Q5T754	118 aa		5.14	□□□□□ -1.59
RHOT2-223	ENST00000569706		A0A0A0MQY5	61 aa		4.84	□□□□□ -1.63
RHOT2-223	ENST00000569706	KRTAP21-2	Q3LI59	83 aa		4.75	□□□□□ -1.65
RHOT2-223	ENST00000569706	INE1	O15225	51 aa		4.71	□□□□□ -1.66
RHOT2-223	ENST00000569706	PHGR1	C9JFL3	82 aa		4.69	□□□□□ -1.66
RHOT2-223	ENST00000569706	PRM1	P04553	51 aa		4.35	□□□□□ -1.71
RHOT2-223	ENST00000569706	KRTAP4-4	Q9BYR3	166 aa		4.29	□□□□□ -1.72
RHOT2-223	ENST00000569706	MUC19	Q7Z5P9	8384 aa		4.26	□□□□□ -1.73
RHOT2-223	ENST00000569706		H3BS24	57 aa		3.63	□□□□□ -1.83
RHOT2-223	ENST00000569706	KRTAP21-1	Q3LI58	79 aa		3.6	□□□□□ -1.83
RHOT2-223	ENST00000569706	MUC16	Q8WXI7	14507 aa		3.06	□□□□□ -1.92

Retrieved 78 of 20,778 RNA–protein pairs in 237 ms