RNA–Protein interactions for RNA: ENST00000569337.1

UBR1-210, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5

Gene UBR1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-210ENST00000569337 KRTAP10-12P60413 245 aa3.72□□□□□ -1.81
UBR1-210ENST00000569337 KRTAP2-3P0C7H8 128 aa3.68□□□□□ -1.82
UBR1-210ENST00000569337 LCE1AQ5T7P2 110 aa3.68□□□□□ -1.82
UBR1-210ENST00000569337 LCE5AQ5TCM9 118 aa3.68□□□□□ -1.82
UBR1-210ENST00000569337 KRTAP2-4Q9BYR9 128 aa3.68□□□□□ -1.82
UBR1-210ENST00000569337 K7ERS5 55 aa3.67□□□□□ -1.82
UBR1-210ENST00000569337 LCE1DQ5T752 114 aa3.65□□□□□ -1.83
UBR1-210ENST00000569337 BRK1Q8WUW1 75 aa3.63□□□□□ -1.83
UBR1-210ENST00000569337 SPRR2DP22532 72 aa3.61□□□□□ -1.83
UBR1-210ENST00000569337 TNP1P09430 55 aa3.59□□□□□ -1.83
UBR1-210ENST00000569337 KRTAP2-2Q9BYT5 123 aa3.57□□□□□ -1.84
UBR1-210ENST00000569337 KRTAP2-1Q9BYU5 128 aa3.57□□□□□ -1.84
UBR1-210ENST00000569337 ROMO1P60602 79 aa3.54□□□□□ -1.84
UBR1-210ENST00000569337 KRTAP25-1Q3LHN0 102 aa3.53□□□□□ -1.84
UBR1-210ENST00000569337 LCE3AQ5TA76 89 aa3.53□□□□□ -1.84
UBR1-210ENST00000569337 KRTAP4-9Q9BYQ8 210 aa3.51□□□□□ -1.85
UBR1-210ENST00000569337 KRTAP19-7Q3SYF9 63 aa3.49□□□□□ -1.85
UBR1-210ENST00000569337 KRTAP4-7Q9BYR0 210 aa3.48□□□□□ -1.85
UBR1-210ENST00000569337 KRTAP19-5Q3LI72 72 aa3.47□□□□□ -1.85
UBR1-210ENST00000569337 MT1EP04732 61 aa3.46□□□□□ -1.86
UBR1-210ENST00000569337 PRAC1Q96KF2 57 aa3.45□□□□□ -1.86
UBR1-210ENST00000569337 KRTAP19-3Q7Z4W3 81 aa3.44□□□□□ -1.86
UBR1-210ENST00000569337 KRTAP4-11Q9BYQ6 195 aa3.44□□□□□ -1.86
UBR1-210ENST00000569337 DSTQ03001 7570 aaKnown RBP3.44□□□□□ -1.86
UBR1-210ENST00000569337 PMAIP1Q13794 54 aa3.42□□□□□ -1.86
UBR1-210ENST00000569337 PRO0628Q9UI54 55 aa3.42□□□□□ -1.86
UBR1-210ENST00000569337 KRTAP12-3P60328 96 aa3.38□□□□□ -1.87
UBR1-210ENST00000569337 MT1GP13640 62 aa3.37□□□□□ -1.87
UBR1-210ENST00000569337 PP632Q6XCG6 107 aa3.36□□□□□ -1.87
UBR1-210ENST00000569337 KRTAP4-2Q9BYR5 136 aa3.34□□□□□ -1.87
UBR1-210ENST00000569337 MT1LQ93083 61 aa3.33□□□□□ -1.88
UBR1-210ENST00000569337 MT1MQ8N339 61 aa3.29□□□□□ -1.88
UBR1-210ENST00000569337 KRTAP4-3Q9BYR4 195 aa3.22□□□□□ -1.89
UBR1-210ENST00000569337 KTN1-AS1Q86SY8 53 aa3.2□□□□□ -1.9
UBR1-210ENST00000569337 MT4P47944 62 aa3.16□□□□□ -1.9
UBR1-210ENST00000569337 LCE3CQ5T5A8 94 aa3.14□□□□□ -1.91
UBR1-210ENST00000569337 HMCN1Q96RW7 5635 aa3.13□□□□□ -1.91
UBR1-210ENST00000569337 KRTAP5-4Q6L8H1 288 aa3.12□□□□□ -1.91
UBR1-210ENST00000569337 GPR98Q8WXG9 6306 aa3.12□□□□□ -1.91
UBR1-210ENST00000569337 NDUFAF8A1L188 74 aa3.11□□□□□ -1.91
UBR1-210ENST00000569337 MT3P25713 68 aa3.03□□□□□ -1.92
UBR1-210ENST00000569337 KRTAP9-6A8MVA2 160 aa3.02□□□□□ -1.93
UBR1-210ENST00000569337 AHNAK2Q8IVF2 5795 aa3.01□□□□□ -1.93
UBR1-210ENST00000569337 KRTAP5-5Q701N2 237 aaPredicted RBP3□□□□□ -1.93
UBR1-210ENST00000569337 KRTAP12-4P60329 112 aa2.96□□□□□ -1.94
UBR1-210ENST00000569337 SPRR5A0A1B0GTR4 108 aa2.95□□□□□ -1.94
UBR1-210ENST00000569337 KRTAP20-2Q3LI61 65 aa2.95□□□□□ -1.94
UBR1-210ENST00000569337 SYNE1Q8NF91 8797 aaKnown RBP2.94□□□□□ -1.94
UBR1-210ENST00000569337 LCE1FQ5T754 118 aa2.92□□□□□ -1.94
UBR1-210ENST00000569337 KRTAP5-10Q6L8G5 202 aa2.92□□□□□ -1.94
UBR1-210ENST00000569337 KRTAP5-3Q6L8H2 238 aa2.88□□□□□ -1.95
UBR1-210ENST00000569337 MT1AP04731 61 aa2.83□□□□□ -1.96
UBR1-210ENST00000569337 KRTAP6-1Q3LI64 71 aa2.82□□□□□ -1.96
UBR1-210ENST00000569337 KRTAP5-7Q6L8G8 165 aa2.81□□□□□ -1.96
UBR1-210ENST00000569337 KRTAP5-2Q701N4 177 aa2.73□□□□□ -1.97
UBR1-210ENST00000569337 KRTAP6-2Q3LI66 62 aa2.68□□□□□ -1.98
UBR1-210ENST00000569337 OBSCNQ5VST9 7968 aa2.66□□□□□ -1.98
UBR1-210ENST00000569337 LUZP6Q538Z0 58 aa2.62□□□□□ -1.99
UBR1-210ENST00000569337 KRTAP5-8O75690 187 aa2.59□□□□□ -1.99
UBR1-210ENST00000569337 AHNAKQ09666 5890 aaKnown RBP2.48□□□□□ -2.01
UBR1-210ENST00000569337 MUC5BQ9HC84 5762 aaPredicted RBP2.48□□□□□ -2.01
UBR1-210ENST00000569337 LCE1EQ5T753 118 aa2.47□□□□□ -2.01
UBR1-210ENST00000569337 MUC5ACP98088 5654 aa2.46□□□□□ -2.02
UBR1-210ENST00000569337 LCE3EQ5T5B0 92 aa2.46□□□□□ -2.02
UBR1-210ENST00000569337 KRTAP5-1Q6L8H4 278 aa2.45□□□□□ -2.02
UBR1-210ENST00000569337 KRTAP5-11Q6L8G4 156 aa2.35□□□□□ -2.03
UBR1-210ENST00000569337 LCE3DQ9BYE3 92 aa2.31□□□□□ -2.04
UBR1-210ENST00000569337 LCE1BQ5T7P3 118 aa2.25□□□□□ -2.05
UBR1-210ENST00000569337 LCE1CQ5T751 118 aa2.2□□□□□ -2.06
UBR1-210ENST00000569337 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.11□□□□□ -2.07
UBR1-210ENST00000569337 INE1O15225 51 aa1.97□□□□□ -2.09
UBR1-210ENST00000569337 KRTAP21-2Q3LI59 83 aa1.86□□□□□ -2.11
UBR1-210ENST00000569337 PRM1P04553 51 aa1.85□□□□□ -2.11
UBR1-210ENST00000569337 KRTAP4-4Q9BYR3 166 aa1.76□□□□□ -2.13
UBR1-210ENST00000569337 PHGR1C9JFL3 82 aa1.72□□□□□ -2.13
UBR1-210ENST00000569337 MUC19Q7Z5P9 8384 aa1.64□□□□□ -2.15
UBR1-210ENST00000569337 KRTAP21-1Q3LI58 79 aa1.31□□□□□ -2.2
UBR1-210ENST00000569337 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 319.7 ms