RNA–Protein interactions for RNA: ENST00000569322.1

NUP93-218, Transcript of nucleoporin 93, humanhuman

TSL 3

Gene NUP93, Length 410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-218ENST00000569322 KRTAP23-1A1A580 65 aa3.49□□□□□ -1.85
NUP93-218ENST00000569322 SYNE2Q8WXH0 6885 aaKnown RBP3.49□□□□□ -1.85
NUP93-218ENST00000569322 MACF1Q9UPN3 7388 aaKnown RBP3.44□□□□□ -1.86
NUP93-218ENST00000569322 KRTAP10-12P60413 245 aa3.44□□□□□ -1.86
NUP93-218ENST00000569322 KRTAP10-7P60409 375 aaPredicted RBP3.42□□□□□ -1.86
NUP93-218ENST00000569322 KRTAP15-1Q3LI76 137 aa3.41□□□□□ -1.86
NUP93-218ENST00000569322 LCE3AQ5TA76 89 aa3.39□□□□□ -1.87
NUP93-218ENST00000569322 KRTAP8-1Q8IUC2 63 aa3.35□□□□□ -1.87
NUP93-218ENST00000569322 KRTAP5-11Q6L8G4 156 aa3.33□□□□□ -1.88
NUP93-218ENST00000569322 KRTAP6-3Q3LI67 103 aa3.28□□□□□ -1.88
NUP93-218ENST00000569322 MUC12Q9UKN1 5478 aa3.27□□□□□ -1.89
NUP93-218ENST00000569322 KRTAP12-3P60328 96 aa3.27□□□□□ -1.89
NUP93-218ENST00000569322 NEBP20929 6669 aa3.26□□□□□ -1.89
NUP93-218ENST00000569322 KRTAP19-5Q3LI72 72 aa3.23□□□□□ -1.89
NUP93-218ENST00000569322 KRTAP20-1Q3LI63 56 aa3.22□□□□□ -1.89
NUP93-218ENST00000569322 KMT2DO14686 5537 aa3.21□□□□□ -1.9
NUP93-218ENST00000569322 KRTAP19-7Q3SYF9 63 aa3.2□□□□□ -1.9
NUP93-218ENST00000569322 MT1EP04732 61 aa3.15□□□□□ -1.91
NUP93-218ENST00000569322 KRTAP5-9P26371 169 aa3.15□□□□□ -1.91
NUP93-218ENST00000569322 MDN1Q9NU22 5596 aa3.14□□□□□ -1.91
NUP93-218ENST00000569322 LCE1AQ5T7P2 110 aa3.11□□□□□ -1.91
NUP93-218ENST00000569322 SPRR2FQ96RM1 72 aa3.1□□□□□ -1.91
NUP93-218ENST00000569322 KRTAP5-1Q6L8H4 278 aa3.09□□□□□ -1.91
NUP93-218ENST00000569322 MT1LQ93083 61 aa3.09□□□□□ -1.91
NUP93-218ENST00000569322 KRTAP5-4Q6L8H1 288 aa3.06□□□□□ -1.92
NUP93-218ENST00000569322 SPRR5A0A1B0GTR4 108 aa3.05□□□□□ -1.92
NUP93-218ENST00000569322 LCE3CQ5T5A8 94 aa3.05□□□□□ -1.92
NUP93-218ENST00000569322 KRTAP19-3Q7Z4W3 81 aa3.05□□□□□ -1.92
NUP93-218ENST00000569322 KRTAP2-3P0C7H8 128 aa3.04□□□□□ -1.92
NUP93-218ENST00000569322 KRTAP2-4Q9BYR9 128 aa3.04□□□□□ -1.92
NUP93-218ENST00000569322 MT1GP13640 62 aa3.03□□□□□ -1.92
NUP93-218ENST00000569322 KRTAP4-4Q9BYR3 166 aa3.02□□□□□ -1.93
NUP93-218ENST00000569322 LUZP6Q538Z0 58 aa2.98□□□□□ -1.93
NUP93-218ENST00000569322 MT1MQ8N339 61 aa2.98□□□□□ -1.93
NUP93-218ENST00000569322 GPR98Q8WXG9 6306 aa2.97□□□□□ -1.93
NUP93-218ENST00000569322 SPRR2EP22531 72 aa2.96□□□□□ -1.94
NUP93-218ENST00000569322 SPRR2BP35325 72 aa2.96□□□□□ -1.94
NUP93-218ENST00000569322 SPRR2AP35326 72 aa2.96□□□□□ -1.94
NUP93-218ENST00000569322 LCE1EQ5T753 118 aa2.95□□□□□ -1.94
NUP93-218ENST00000569322 KRTAP2-2Q9BYT5 123 aa2.95□□□□□ -1.94
NUP93-218ENST00000569322 KRTAP2-1Q9BYU5 128 aa2.92□□□□□ -1.94
NUP93-218ENST00000569322 KRTAP4-3Q9BYR4 195 aa2.86□□□□□ -1.95
NUP93-218ENST00000569322 SPRR2DP22532 72 aa2.85□□□□□ -1.95
NUP93-218ENST00000569322 NDUFAF8A1L188 74 aa2.84□□□□□ -1.95
NUP93-218ENST00000569322 KRTAP9-6A8MVA2 160 aa2.84□□□□□ -1.95
NUP93-218ENST00000569322 DSTQ03001 7570 aaKnown RBP2.73□□□□□ -1.97
NUP93-218ENST00000569322 KRTAP5-5Q701N2 237 aaPredicted RBP2.68□□□□□ -1.98
NUP93-218ENST00000569322 OBSCNQ5VST9 7968 aa2.67□□□□□ -1.98
NUP93-218ENST00000569322 KRTAP5-2Q701N4 177 aa2.66□□□□□ -1.98
NUP93-218ENST00000569322 MT1AP04731 61 aa2.65□□□□□ -1.99
NUP93-218ENST00000569322 HMCN1Q96RW7 5635 aa2.62□□□□□ -1.99
NUP93-218ENST00000569322 AHNAK2Q8IVF2 5795 aa2.62□□□□□ -1.99
NUP93-218ENST00000569322 KRTAP6-1Q3LI64 71 aa2.58□□□□□ -2
NUP93-218ENST00000569322 A0A0A0MQY5 61 aa2.56□□□□□ -2
NUP93-218ENST00000569322 KRTAP5-10Q6L8G5 202 aa2.54□□□□□ -2
NUP93-218ENST00000569322 KRTAP12-4P60329 112 aa2.52□□□□□ -2.01
NUP93-218ENST00000569322 SYNE1Q8NF91 8797 aaKnown RBP2.5□□□□□ -2.01
NUP93-218ENST00000569322 MT3P25713 68 aa2.5□□□□□ -2.01
NUP93-218ENST00000569322 MT4P47944 62 aa2.5□□□□□ -2.01
NUP93-218ENST00000569322 KRTAP5-7Q6L8G8 165 aa2.47□□□□□ -2.01
NUP93-218ENST00000569322 INE1O15225 51 aa2.41□□□□□ -2.02
NUP93-218ENST00000569322 KRTAP20-2Q3LI61 65 aa2.4□□□□□ -2.03
NUP93-218ENST00000569322 KRTAP6-2Q3LI66 62 aa2.38□□□□□ -2.03
NUP93-218ENST00000569322 LCE3DQ9BYE3 92 aa2.3□□□□□ -2.04
NUP93-218ENST00000569322 KRTAP5-8O75690 187 aa2.28□□□□□ -2.04
NUP93-218ENST00000569322 AHNAKQ09666 5890 aaKnown RBP2.27□□□□□ -2.05
NUP93-218ENST00000569322 LCE3EQ5T5B0 92 aa2.24□□□□□ -2.05
NUP93-218ENST00000569322 LCE1FQ5T754 118 aa2.24□□□□□ -2.05
NUP93-218ENST00000569322 MUC5BQ9HC84 5762 aaPredicted RBP2.21□□□□□ -2.06
NUP93-218ENST00000569322 MUC5ACP98088 5654 aa2.2□□□□□ -2.06
NUP93-218ENST00000569322 LCE1CQ5T751 118 aa1.94□□□□□ -2.1
NUP93-218ENST00000569322 LCE1BQ5T7P3 118 aa1.94□□□□□ -2.1
NUP93-218ENST00000569322 PRM1P04553 51 aa1.92□□□□□ -2.1
NUP93-218ENST00000569322 KRTAP21-2Q3LI59 83 aa1.69□□□□□ -2.14
NUP93-218ENST00000569322 MUC19Q7Z5P9 8384 aa1.63□□□□□ -2.15
NUP93-218ENST00000569322 PHGR1C9JFL3 82 aa1.51□□□□□ -2.17
NUP93-218ENST00000569322 KRTAP21-1Q3LI58 79 aa1.18□□□□□ -2.22
NUP93-218ENST00000569322 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 70.8 ms