RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 DMAC1Q96GE9 116 aa3.03□□□□□ -1.92
SMG1-216ENST00000569122 MT1LQ93083 61 aa3.02□□□□□ -1.93
SMG1-216ENST00000569122 CCDC179H3BU77 68 aa3□□□□□ -1.93
SMG1-216ENST00000569122 ATP5EP56381 51 aaPredicted RBP3□□□□□ -1.93
SMG1-216ENST00000569122 TMEM258P61165 79 aa3□□□□□ -1.93
SMG1-216ENST00000569122 KRTAP12-4P60329 112 aa2.99□□□□□ -1.93
SMG1-216ENST00000569122 OCR1Q9BZK8 76 aa2.99□□□□□ -1.93
SMG1-216ENST00000569122 KRTAP4-3Q9BYR4 195 aa2.97□□□□□ -1.93
SMG1-216ENST00000569122 SNURFQ9Y675 71 aa2.95□□□□□ -1.94
SMG1-216ENST00000569122 ACYP2P14621 99 aa2.94□□□□□ -1.94
SMG1-216ENST00000569122 AHNAKQ09666 5890 aaKnown RBP2.92□□□□□ -1.94
SMG1-216ENST00000569122 SPANXA2-OT1Q8N9U9 137 aa2.91□□□□□ -1.94
SMG1-216ENST00000569122 H7BZZ5 65 aa2.9□□□□□ -1.95
SMG1-216ENST00000569122 SERP1Q9Y6X1 66 aa2.9□□□□□ -1.95
SMG1-216ENST00000569122 RPS28P62857 69 aaKnown RBP2.89□□□□□ -1.95
SMG1-216ENST00000569122 CHKB-CPT1BH3BT56 60 aa2.88□□□□□ -1.95
SMG1-216ENST00000569122 KRTAP5-5Q701N2 237 aaPredicted RBP2.87□□□□□ -1.95
SMG1-216ENST00000569122 MUC5ACP98088 5654 aa2.86□□□□□ -1.95
SMG1-216ENST00000569122 KRTAP13-4Q3LI77 160 aa2.86□□□□□ -1.95
SMG1-216ENST00000569122 MUC5BQ9HC84 5762 aaPredicted RBP2.86□□□□□ -1.95
SMG1-216ENST00000569122 C10orf95Q9H7T3 257 aa2.85□□□□□ -1.95
SMG1-216ENST00000569122 V9GYY9 64 aa2.84□□□□□ -1.95
SMG1-216ENST00000569122 SMIM26A0A096LP01 95 aa2.83□□□□□ -1.96
SMG1-216ENST00000569122 SPINT4Q6UDR6 99 aa2.81□□□□□ -1.96
SMG1-216ENST00000569122 SEC61GP60059 68 aa2.79□□□□□ -1.96
SMG1-216ENST00000569122 COA5Q86WW8 74 aa2.79□□□□□ -1.96
SMG1-216ENST00000569122 SYNE1Q8NF91 8797 aaKnown RBP2.78□□□□□ -1.96
SMG1-216ENST00000569122 KRTAP5-8O75690 187 aa2.78□□□□□ -1.96
SMG1-216ENST00000569122 LCE3AQ5TA76 89 aa2.78□□□□□ -1.96
SMG1-216ENST00000569122 PRR15LQ9BU68 103 aa2.78□□□□□ -1.96
SMG1-216ENST00000569122 TNP1P09430 55 aa2.77□□□□□ -1.97
SMG1-216ENST00000569122 MT3P25713 68 aa2.74□□□□□ -1.97
SMG1-216ENST00000569122 Q1T7F1 81 aa2.74□□□□□ -1.97
SMG1-216ENST00000569122 KRTAP12-3P60328 96 aa2.73□□□□□ -1.97
SMG1-216ENST00000569122 KRTAP5-11Q6L8G4 156 aa2.72□□□□□ -1.97
SMG1-216ENST00000569122 KRTAP12-1P59990 96 aa2.71□□□□□ -1.98
SMG1-216ENST00000569122 KRTAP5-2Q701N4 177 aa2.71□□□□□ -1.98
SMG1-216ENST00000569122 A0A1B0GU69 56 aa2.7□□□□□ -1.98
SMG1-216ENST00000569122 LINC01558Q9Y6Z2 57 aa2.7□□□□□ -1.98
SMG1-216ENST00000569122 SPATA8Q6RVD6 105 aa2.68□□□□□ -1.98
SMG1-216ENST00000569122 PSPHP1O15172 72 aa2.67□□□□□ -1.98
SMG1-216ENST00000569122 A0A1B0GU33 70 aa2.66□□□□□ -1.98
SMG1-216ENST00000569122 A6NED7 52 aa2.66□□□□□ -1.98
SMG1-216ENST00000569122 UQCR11O14957 56 aa2.63□□□□□ -1.99
SMG1-216ENST00000569122 BRK1Q8WUW1 75 aa2.63□□□□□ -1.99
SMG1-216ENST00000569122 OBSCNQ5VST9 7968 aa2.62□□□□□ -1.99
SMG1-216ENST00000569122 KRTAP5-1Q6L8H4 278 aa2.61□□□□□ -1.99
SMG1-216ENST00000569122 K7ERS5 55 aa2.6□□□□□ -1.99
SMG1-216ENST00000569122 PRO0628Q9UI54 55 aa2.6□□□□□ -1.99
SMG1-216ENST00000569122 MIR22HGQ0VDD5 57 aa2.59□□□□□ -1.99
SMG1-216ENST00000569122 CDC42SE1Q9NRR8 79 aa2.59□□□□□ -1.99
SMG1-216ENST00000569122 PRAC1Q96KF2 57 aa2.58□□□□□ -2
SMG1-216ENST00000569122 MT1AP04731 61 aa2.57□□□□□ -2
SMG1-216ENST00000569122 KRTAP6-1Q3LI64 71 aa2.55□□□□□ -2
SMG1-216ENST00000569122 KRTAP4-4Q9BYR3 166 aa2.54□□□□□ -2
SMG1-216ENST00000569122 KRTAP6-2Q3LI66 62 aa2.53□□□□□ -2
SMG1-216ENST00000569122 NDUFAF8A1L188 74 aa2.51□□□□□ -2.01
SMG1-216ENST00000569122 PMAIP1Q13794 54 aa2.5□□□□□ -2.01
SMG1-216ENST00000569122 KRTAP25-1Q3LHN0 102 aa2.5□□□□□ -2.01
SMG1-216ENST00000569122 A8MU10 97 aa2.48□□□□□ -2.01
SMG1-216ENST00000569122 LCE3CQ5T5A8 94 aa2.47□□□□□ -2.01
SMG1-216ENST00000569122 KTN1-AS1Q86SY8 53 aa2.4□□□□□ -2.03
SMG1-216ENST00000569122 LCE1EQ5T753 118 aa2.39□□□□□ -2.03
SMG1-216ENST00000569122 ROMO1P60602 79 aa2.37□□□□□ -2.03
SMG1-216ENST00000569122 LCE1FQ5T754 118 aa2.31□□□□□ -2.04
SMG1-216ENST00000569122 KRTAP9-6A8MVA2 160 aa2.25□□□□□ -2.05
SMG1-216ENST00000569122 LCE1BQ5T7P3 118 aa2.18□□□□□ -2.06
SMG1-216ENST00000569122 LCE1CQ5T751 118 aa2.15□□□□□ -2.07
SMG1-216ENST00000569122 LUZP6Q538Z0 58 aa2.08□□□□□ -2.08
SMG1-216ENST00000569122 PHGR1C9JFL3 82 aa2□□□□□ -2.09
SMG1-216ENST00000569122 LCE3EQ5T5B0 92 aa1.99□□□□□ -2.09
SMG1-216ENST00000569122 LCE3DQ9BYE3 92 aa1.72□□□□□ -2.13
SMG1-216ENST00000569122 KRTAP21-2Q3LI59 83 aa1.68□□□□□ -2.14
SMG1-216ENST00000569122 MUC19Q7Z5P9 8384 aa1.63□□□□□ -2.15
SMG1-216ENST00000569122 INE1O15225 51 aa1.62□□□□□ -2.15
SMG1-216ENST00000569122 KRTAP21-1Q3LI58 79 aa1.57□□□□□ -2.16
SMG1-216ENST00000569122 PRM1P04553 51 aa1.2□□□□□ -2.22
SMG1-216ENST00000569122 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 79.8 ms