RNA–Protein interactions for RNA: ENST00000568890.5

CNEP1R1-210, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 1,992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-210ENST00000568890 SPRR2DP22532 72 aa6.03□□□□□ -1.44
CNEP1R1-210ENST00000568890 KRTAP20-1Q3LI63 56 aa6.02□□□□□ -1.45
CNEP1R1-210ENST00000568890 LCE5AQ5TCM9 118 aa6.02□□□□□ -1.45
CNEP1R1-210ENST00000568890 KRTAP9-9Q9BYP9 154 aa6.02□□□□□ -1.45
CNEP1R1-210ENST00000568890 KRTAP9-4Q9BYQ2 154 aa6.02□□□□□ -1.45
CNEP1R1-210ENST00000568890 KRTAP19-3Q7Z4W3 81 aa6.02□□□□□ -1.45
CNEP1R1-210ENST00000568890 KRTAP2-3P0C7H8 128 aa5.97□□□□□ -1.45
CNEP1R1-210ENST00000568890 KRTAP2-4Q9BYR9 128 aa5.97□□□□□ -1.45
CNEP1R1-210ENST00000568890 KRTAP5-3Q6L8H2 238 aa5.97□□□□□ -1.45
CNEP1R1-210ENST00000568890 ROMO1P60602 79 aa5.95□□□□□ -1.46
CNEP1R1-210ENST00000568890 MT1LQ93083 61 aa5.95□□□□□ -1.46
CNEP1R1-210ENST00000568890 KRTAP12-3P60328 96 aa5.94□□□□□ -1.46
CNEP1R1-210ENST00000568890 DSTQ03001 7570 aaKnown RBP5.91□□□□□ -1.46
CNEP1R1-210ENST00000568890 MT1GP13640 62 aa5.9□□□□□ -1.46
CNEP1R1-210ENST00000568890 KRTAP23-1A1A580 65 aa5.86□□□□□ -1.47
CNEP1R1-210ENST00000568890 BRK1Q8WUW1 75 aa5.86□□□□□ -1.47
CNEP1R1-210ENST00000568890 MT1MQ8N339 61 aa5.84□□□□□ -1.48
CNEP1R1-210ENST00000568890 KRTAP2-2Q9BYT5 123 aa5.81□□□□□ -1.48
CNEP1R1-210ENST00000568890 KRTAP2-1Q9BYU5 128 aa5.81□□□□□ -1.48
CNEP1R1-210ENST00000568890 KRTAP4-12Q9BQ66 201 aa5.8□□□□□ -1.48
CNEP1R1-210ENST00000568890 KRTAP4-2Q9BYR5 136 aa5.8□□□□□ -1.48
CNEP1R1-210ENST00000568890 LCE1DQ5T752 114 aa5.78□□□□□ -1.48
CNEP1R1-210ENST00000568890 PP632Q6XCG6 107 aa5.78□□□□□ -1.48
CNEP1R1-210ENST00000568890 KRTAP4-3Q9BYR4 195 aa5.77□□□□□ -1.49
CNEP1R1-210ENST00000568890 KRTAP4-9Q9BYQ8 210 aa5.73□□□□□ -1.49
CNEP1R1-210ENST00000568890 KRTAP15-1Q3LI76 137 aa5.66□□□□□ -1.5
CNEP1R1-210ENST00000568890 PMAIP1Q13794 54 aa5.53□□□□□ -1.52
CNEP1R1-210ENST00000568890 LCE3CQ5T5A8 94 aa5.51□□□□□ -1.53
CNEP1R1-210ENST00000568890 KRTAP19-4Q3LI73 84 aa5.51□□□□□ -1.53
CNEP1R1-210ENST00000568890 PRO0628Q9UI54 55 aa5.39□□□□□ -1.55
CNEP1R1-210ENST00000568890 KRTAP5-4Q6L8H1 288 aa5.37□□□□□ -1.55
CNEP1R1-210ENST00000568890 H3BS24 57 aa5.36□□□□□ -1.55
CNEP1R1-210ENST00000568890 KRTAP5-5Q701N2 237 aaPredicted RBP5.35□□□□□ -1.55
CNEP1R1-210ENST00000568890 KRTAP4-11Q9BYQ6 195 aa5.34□□□□□ -1.55
CNEP1R1-210ENST00000568890 LCE4AQ5TA78 99 aa5.33□□□□□ -1.56
CNEP1R1-210ENST00000568890 PRAC1Q96KF2 57 aa5.31□□□□□ -1.56
CNEP1R1-210ENST00000568890 KRTAP9-6A8MVA2 160 aa5.3□□□□□ -1.56
CNEP1R1-210ENST00000568890 MT4P47944 62 aa5.29□□□□□ -1.56
CNEP1R1-210ENST00000568890 HMCN1Q96RW7 5635 aa5.23□□□□□ -1.57
CNEP1R1-210ENST00000568890 SYNE1Q8NF91 8797 aaKnown RBP5.11□□□□□ -1.59
CNEP1R1-210ENST00000568890 KTN1-AS1Q86SY8 53 aa5.06□□□□□ -1.6
CNEP1R1-210ENST00000568890 KRTAP6-1Q3LI64 71 aa5.05□□□□□ -1.6
CNEP1R1-210ENST00000568890 KRTAP12-4P60329 112 aa5.04□□□□□ -1.6
CNEP1R1-210ENST00000568890 KRTAP20-2Q3LI61 65 aa5.04□□□□□ -1.6
CNEP1R1-210ENST00000568890 MT1AP04731 61 aa5.03□□□□□ -1.6
CNEP1R1-210ENST00000568890 SPRR5A0A1B0GTR4 108 aa5□□□□□ -1.61
CNEP1R1-210ENST00000568890 AHNAK2Q8IVF2 5795 aa4.84□□□□□ -1.64
CNEP1R1-210ENST00000568890 GPR98Q8WXG9 6306 aa4.79□□□□□ -1.64
CNEP1R1-210ENST00000568890 KRTAP5-2Q701N4 177 aa4.76□□□□□ -1.65
CNEP1R1-210ENST00000568890 KRTAP5-10Q6L8G5 202 aa4.76□□□□□ -1.65
CNEP1R1-210ENST00000568890 KRTAP6-2Q3LI66 62 aa4.74□□□□□ -1.65
CNEP1R1-210ENST00000568890 OBSCNQ5VST9 7968 aa4.59□□□□□ -1.67
CNEP1R1-210ENST00000568890 A0A0A0MQY5 61 aa4.58□□□□□ -1.68
CNEP1R1-210ENST00000568890 MT3P25713 68 aa4.57□□□□□ -1.68
CNEP1R1-210ENST00000568890 KRTAP5-7Q6L8G8 165 aa4.48□□□□□ -1.69
CNEP1R1-210ENST00000568890 KRTAP5-8O75690 187 aa4.38□□□□□ -1.71
CNEP1R1-210ENST00000568890 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.29□□□□□ -1.72
CNEP1R1-210ENST00000568890 LUZP6Q538Z0 58 aa4.28□□□□□ -1.72
CNEP1R1-210ENST00000568890 KRTAP5-1Q6L8H4 278 aa4.24□□□□□ -1.73
CNEP1R1-210ENST00000568890 LCE1EQ5T753 118 aa4.12□□□□□ -1.75
CNEP1R1-210ENST00000568890 MUC5ACP98088 5654 aa4.06□□□□□ -1.76
CNEP1R1-210ENST00000568890 LCE3DQ9BYE3 92 aa4.03□□□□□ -1.76
CNEP1R1-210ENST00000568890 MUC5BQ9HC84 5762 aaPredicted RBP3.97□□□□□ -1.77
CNEP1R1-210ENST00000568890 LCE1BQ5T7P3 118 aa3.88□□□□□ -1.79
CNEP1R1-210ENST00000568890 NDUFAF8A1L188 74 aa3.85□□□□□ -1.79
CNEP1R1-210ENST00000568890 LCE1CQ5T751 118 aa3.85□□□□□ -1.79
CNEP1R1-210ENST00000568890 LCE3EQ5T5B0 92 aa3.83□□□□□ -1.8
CNEP1R1-210ENST00000568890 AHNAKQ09666 5890 aaKnown RBP3.81□□□□□ -1.8
CNEP1R1-210ENST00000568890 KRTAP5-11Q6L8G4 156 aa3.5□□□□□ -1.85
CNEP1R1-210ENST00000568890 KRTAP4-4Q9BYR3 166 aa3.45□□□□□ -1.86
CNEP1R1-210ENST00000568890 KRTAP21-2Q3LI59 83 aa3.33□□□□□ -1.88
CNEP1R1-210ENST00000568890 INE1O15225 51 aa3.31□□□□□ -1.88
CNEP1R1-210ENST00000568890 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
CNEP1R1-210ENST00000568890 PRM1P04553 51 aa3.09□□□□□ -1.91
CNEP1R1-210ENST00000568890 PHGR1C9JFL3 82 aa2.98□□□□□ -1.93
CNEP1R1-210ENST00000568890 MUC19Q7Z5P9 8384 aa2.8□□□□□ -1.96
CNEP1R1-210ENST00000568890 KRTAP21-1Q3LI58 79 aa2.02□□□□□ -2.09
CNEP1R1-210ENST00000568890 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 53.9 ms