RNA–Protein interactions for RNA: ENST00000568881.1

NEIL1-220, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-220ENST00000568881 SPRR2DP22532 72 aa5.31□□□□□ -1.56
NEIL1-220ENST00000568881 TNP1P09430 55 aa5.3□□□□□ -1.56
NEIL1-220ENST00000568881 CDC42SE1Q9NRR8 79 aa5.29□□□□□ -1.56
NEIL1-220ENST00000568881 LCE3BQ5TA77 95 aa5.2□□□□□ -1.58
NEIL1-220ENST00000568881 KRTAP25-1Q3LHN0 102 aa5.16□□□□□ -1.58
NEIL1-220ENST00000568881 LCE3AQ5TA76 89 aa5.12□□□□□ -1.59
NEIL1-220ENST00000568881 KRTAP19-7Q3SYF9 63 aa5.11□□□□□ -1.59
NEIL1-220ENST00000568881 MT1EP04732 61 aa5.09□□□□□ -1.59
NEIL1-220ENST00000568881 ROMO1P60602 79 aa5.08□□□□□ -1.6
NEIL1-220ENST00000568881 KRTAP19-3Q7Z4W3 81 aa5.07□□□□□ -1.6
NEIL1-220ENST00000568881 KRTAP19-5Q3LI72 72 aa5.06□□□□□ -1.6
NEIL1-220ENST00000568881 LCE5AQ5TCM9 118 aa5.04□□□□□ -1.6
NEIL1-220ENST00000568881 KRTAP4-9Q9BYQ8 210 aa5.04□□□□□ -1.6
NEIL1-220ENST00000568881 PP632Q6XCG6 107 aa5□□□□□ -1.61
NEIL1-220ENST00000568881 DSTQ03001 7570 aaKnown RBP4.99□□□□□ -1.61
NEIL1-220ENST00000568881 KRTAP23-1A1A580 65 aa4.98□□□□□ -1.61
NEIL1-220ENST00000568881 MT1GP13640 62 aa4.97□□□□□ -1.61
NEIL1-220ENST00000568881 A0A0A0MQY5 61 aa4.94□□□□□ -1.62
NEIL1-220ENST00000568881 KRTAP12-3P60328 96 aa4.94□□□□□ -1.62
NEIL1-220ENST00000568881 MT1LQ93083 61 aa4.88□□□□□ -1.63
NEIL1-220ENST00000568881 MT1MQ8N339 61 aa4.84□□□□□ -1.63
NEIL1-220ENST00000568881 PRAC1Q96KF2 57 aa4.83□□□□□ -1.64
NEIL1-220ENST00000568881 LCE1DQ5T752 114 aa4.8□□□□□ -1.64
NEIL1-220ENST00000568881 KRTAP4-3Q9BYR4 195 aa4.79□□□□□ -1.64
NEIL1-220ENST00000568881 KRTAP5-10Q6L8G5 202 aa4.74□□□□□ -1.65
NEIL1-220ENST00000568881 KRTAP15-1Q3LI76 137 aa4.73□□□□□ -1.65
NEIL1-220ENST00000568881 MT4P47944 62 aa4.72□□□□□ -1.65
NEIL1-220ENST00000568881 KRTAP19-4Q3LI73 84 aa4.72□□□□□ -1.65
NEIL1-220ENST00000568881 LCE4AQ5TA78 99 aa4.71□□□□□ -1.66
NEIL1-220ENST00000568881 HMCN1Q96RW7 5635 aa4.71□□□□□ -1.66
NEIL1-220ENST00000568881 SPRR5A0A1B0GTR4 108 aa4.69□□□□□ -1.66
NEIL1-220ENST00000568881 KRTAP4-7Q9BYR0 210 aa4.68□□□□□ -1.66
NEIL1-220ENST00000568881 AHNAK2Q8IVF2 5795 aa4.68□□□□□ -1.66
NEIL1-220ENST00000568881 KRTAP5-7Q6L8G8 165 aa4.64□□□□□ -1.67
NEIL1-220ENST00000568881 LCE3CQ5T5A8 94 aa4.58□□□□□ -1.68
NEIL1-220ENST00000568881 KRTAP5-4Q6L8H1 288 aa4.56□□□□□ -1.68
NEIL1-220ENST00000568881 KRTAP4-6Q9BYQ5 205 aa4.53□□□□□ -1.68
NEIL1-220ENST00000568881 KRTAP5-3Q6L8H2 238 aa4.51□□□□□ -1.69
NEIL1-220ENST00000568881 LOC100996750A0A140TA64 210 aa4.42□□□□□ -1.7
NEIL1-220ENST00000568881 LUZP6Q538Z0 58 aa4.41□□□□□ -1.7
NEIL1-220ENST00000568881 KRTAP5-5Q701N2 237 aaPredicted RBP4.41□□□□□ -1.7
NEIL1-220ENST00000568881 KRTAP12-4P60329 112 aa4.39□□□□□ -1.71
NEIL1-220ENST00000568881 SYNE1Q8NF91 8797 aaKnown RBP4.38□□□□□ -1.71
NEIL1-220ENST00000568881 NDUFAF8A1L188 74 aa4.35□□□□□ -1.71
NEIL1-220ENST00000568881 KRTAP20-2Q3LI61 65 aa4.31□□□□□ -1.72
NEIL1-220ENST00000568881 KRTAP9-6A8MVA2 160 aa4.27□□□□□ -1.73
NEIL1-220ENST00000568881 MT1AP04731 61 aa4.17□□□□□ -1.74
NEIL1-220ENST00000568881 KRTAP6-1Q3LI64 71 aa4.1□□□□□ -1.75
NEIL1-220ENST00000568881 AHNAKQ09666 5890 aaKnown RBP4.06□□□□□ -1.76
NEIL1-220ENST00000568881 KRTAP9-4Q9BYQ2 154 aa4.02□□□□□ -1.77
NEIL1-220ENST00000568881 KRTAP5-2Q701N4 177 aa4□□□□□ -1.77
NEIL1-220ENST00000568881 MUC5ACP98088 5654 aa4□□□□□ -1.77
NEIL1-220ENST00000568881 KRTAP4-11Q9BYQ6 195 aa3.98□□□□□ -1.77
NEIL1-220ENST00000568881 KRTAP6-2Q3LI66 62 aa3.92□□□□□ -1.78
NEIL1-220ENST00000568881 KRTAP5-8O75690 187 aa3.91□□□□□ -1.78
NEIL1-220ENST00000568881 MUC5BQ9HC84 5762 aaPredicted RBP3.91□□□□□ -1.78
NEIL1-220ENST00000568881 MT3P25713 68 aa3.86□□□□□ -1.79
NEIL1-220ENST00000568881 KRTAP9-9Q9BYP9 154 aa3.82□□□□□ -1.8
NEIL1-220ENST00000568881 OBSCNQ5VST9 7968 aa3.78□□□□□ -1.8
NEIL1-220ENST00000568881 INE1O15225 51 aa3.72□□□□□ -1.81
NEIL1-220ENST00000568881 KRTAP5-1Q6L8H4 278 aa3.6□□□□□ -1.83
NEIL1-220ENST00000568881 LCE1EQ5T753 118 aa3.51□□□□□ -1.85
NEIL1-220ENST00000568881 LCE3DQ9BYE3 92 aa3.38□□□□□ -1.87
NEIL1-220ENST00000568881 LCE1BQ5T7P3 118 aa3.28□□□□□ -1.88
NEIL1-220ENST00000568881 KRTAP4-2Q9BYR5 136 aa3.28□□□□□ -1.88
NEIL1-220ENST00000568881 LCE1CQ5T751 118 aa3.25□□□□□ -1.89
NEIL1-220ENST00000568881 LCE3EQ5T5B0 92 aa3.24□□□□□ -1.89
NEIL1-220ENST00000568881 KRTAP4-12Q9BQ66 201 aa3.02□□□□□ -1.93
NEIL1-220ENST00000568881 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.95□□□□□ -1.94
NEIL1-220ENST00000568881 KRTAP5-11Q6L8G4 156 aa2.93□□□□□ -1.94
NEIL1-220ENST00000568881 LCE1FQ5T754 118 aa2.87□□□□□ -1.95
NEIL1-220ENST00000568881 PHGR1C9JFL3 82 aa2.86□□□□□ -1.95
NEIL1-220ENST00000568881 KRTAP21-2Q3LI59 83 aa2.7□□□□□ -1.98
NEIL1-220ENST00000568881 PRM1P04553 51 aa2.61□□□□□ -1.99
NEIL1-220ENST00000568881 KRTAP4-4Q9BYR3 166 aa2.54□□□□□ -2
NEIL1-220ENST00000568881 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
NEIL1-220ENST00000568881 KRTAP21-1Q3LI58 79 aa2.15□□□□□ -2.07
NEIL1-220ENST00000568881 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 87.9 ms