RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 SPRR2DP22532 72 aa6.04□□□□□ -1.44
COMMD4-224ENST00000568877 KRTAP20-1Q3LI63 56 aa6.03□□□□□ -1.44
COMMD4-224ENST00000568877 LCE5AQ5TCM9 118 aa6.01□□□□□ -1.45
COMMD4-224ENST00000568877 MT1LQ93083 61 aa5.98□□□□□ -1.45
COMMD4-224ENST00000568877 MT1GP13640 62 aa5.96□□□□□ -1.46
COMMD4-224ENST00000568877 KRTAP2-3P0C7H8 128 aa5.95□□□□□ -1.46
COMMD4-224ENST00000568877 PP632Q6XCG6 107 aa5.95□□□□□ -1.46
COMMD4-224ENST00000568877 KRTAP2-4Q9BYR9 128 aa5.95□□□□□ -1.46
COMMD4-224ENST00000568877 PMAIP1Q13794 54 aa5.87□□□□□ -1.47
COMMD4-224ENST00000568877 MT1MQ8N339 61 aa5.86□□□□□ -1.47
COMMD4-224ENST00000568877 LCE3BQ5TA77 95 aa5.84□□□□□ -1.47
COMMD4-224ENST00000568877 KRTAP15-1Q3LI76 137 aa5.8□□□□□ -1.48
COMMD4-224ENST00000568877 PRO0628Q9UI54 55 aa5.79□□□□□ -1.48
COMMD4-224ENST00000568877 KRTAP2-2Q9BYT5 123 aa5.78□□□□□ -1.48
COMMD4-224ENST00000568877 KRTAP2-1Q9BYU5 128 aa5.78□□□□□ -1.48
COMMD4-224ENST00000568877 DSTQ03001 7570 aaKnown RBP5.74□□□□□ -1.49
COMMD4-224ENST00000568877 KRTAP19-4Q3LI73 84 aa5.73□□□□□ -1.49
COMMD4-224ENST00000568877 KRTAP4-7Q9BYR0 210 aa5.72□□□□□ -1.49
COMMD4-224ENST00000568877 KRTAP4-3Q9BYR4 195 aa5.71□□□□□ -1.5
COMMD4-224ENST00000568877 LCE3CQ5T5A8 94 aa5.61□□□□□ -1.51
COMMD4-224ENST00000568877 PRAC1Q96KF2 57 aa5.55□□□□□ -1.52
COMMD4-224ENST00000568877 KTN1-AS1Q86SY8 53 aa5.44□□□□□ -1.54
COMMD4-224ENST00000568877 LOC100996750A0A140TA64 210 aa5.39□□□□□ -1.55
COMMD4-224ENST00000568877 LCE4AQ5TA78 99 aa5.37□□□□□ -1.55
COMMD4-224ENST00000568877 KRTAP5-4Q6L8H1 288 aa5.34□□□□□ -1.55
COMMD4-224ENST00000568877 KRTAP5-5Q701N2 237 aaPredicted RBP5.34□□□□□ -1.55
COMMD4-224ENST00000568877 KRTAP4-9Q9BYQ8 210 aa5.32□□□□□ -1.56
COMMD4-224ENST00000568877 KRTAP9-6A8MVA2 160 aa5.28□□□□□ -1.56
COMMD4-224ENST00000568877 MT4P47944 62 aa5.25□□□□□ -1.57
COMMD4-224ENST00000568877 LCE1DQ5T752 114 aa5.25□□□□□ -1.57
COMMD4-224ENST00000568877 SVIPQ8NHG7 77 aa5.15□□□□□ -1.59
COMMD4-224ENST00000568877 KRTAP4-6Q9BYQ5 205 aa5.15□□□□□ -1.59
COMMD4-224ENST00000568877 HMCN1Q96RW7 5635 aa5.15□□□□□ -1.59
COMMD4-224ENST00000568877 GPR98Q8WXG9 6306 aa5.12□□□□□ -1.59
COMMD4-224ENST00000568877 KRTAP12-4P60329 112 aa5.1□□□□□ -1.59
COMMD4-224ENST00000568877 MT1AP04731 61 aa5.09□□□□□ -1.59
COMMD4-224ENST00000568877 SYNE1Q8NF91 8797 aaKnown RBP5.08□□□□□ -1.6
COMMD4-224ENST00000568877 SPRR5A0A1B0GTR4 108 aa5.05□□□□□ -1.6
COMMD4-224ENST00000568877 KRTAP6-1Q3LI64 71 aa5.04□□□□□ -1.6
COMMD4-224ENST00000568877 KRTAP20-2Q3LI61 65 aa5.01□□□□□ -1.61
COMMD4-224ENST00000568877 KRTAP9-4Q9BYQ2 154 aa4.9□□□□□ -1.63
COMMD4-224ENST00000568877 KRTAP5-3Q6L8H2 238 aa4.85□□□□□ -1.63
COMMD4-224ENST00000568877 AHNAK2Q8IVF2 5795 aa4.83□□□□□ -1.64
COMMD4-224ENST00000568877 KRTAP5-10Q6L8G5 202 aa4.76□□□□□ -1.65
COMMD4-224ENST00000568877 KRTAP5-2Q701N4 177 aa4.75□□□□□ -1.65
COMMD4-224ENST00000568877 KRTAP6-2Q3LI66 62 aa4.74□□□□□ -1.65
COMMD4-224ENST00000568877 MT3P25713 68 aa4.65□□□□□ -1.67
COMMD4-224ENST00000568877 LUZP6Q538Z0 58 aa4.62□□□□□ -1.67
COMMD4-224ENST00000568877 KRTAP5-7Q6L8G8 165 aa4.59□□□□□ -1.67
COMMD4-224ENST00000568877 KRTAP4-11Q9BYQ6 195 aa4.47□□□□□ -1.69
COMMD4-224ENST00000568877 OBSCNQ5VST9 7968 aa4.4□□□□□ -1.71
COMMD4-224ENST00000568877 KRTAP5-8O75690 187 aa4.31□□□□□ -1.72
COMMD4-224ENST00000568877 KRTAP5-1Q6L8H4 278 aa4.19□□□□□ -1.74
COMMD4-224ENST00000568877 LCE1EQ5T753 118 aa4.17□□□□□ -1.74
COMMD4-224ENST00000568877 LCE3DQ9BYE3 92 aa4.13□□□□□ -1.75
COMMD4-224ENST00000568877 NDUFAF8A1L188 74 aa4.11□□□□□ -1.75
COMMD4-224ENST00000568877 MUC5ACP98088 5654 aa4.07□□□□□ -1.76
COMMD4-224ENST00000568877 KRTAP9-9Q9BYP9 154 aa4.02□□□□□ -1.77
COMMD4-224ENST00000568877 MUC5BQ9HC84 5762 aaPredicted RBP4.01□□□□□ -1.77
COMMD4-224ENST00000568877 AHNAKQ09666 5890 aaKnown RBP3.97□□□□□ -1.77
COMMD4-224ENST00000568877 LCE3EQ5T5B0 92 aa3.96□□□□□ -1.78
COMMD4-224ENST00000568877 KRTAP4-2Q9BYR5 136 aa3.9□□□□□ -1.79
COMMD4-224ENST00000568877 LCE1BQ5T7P3 118 aa3.89□□□□□ -1.79
COMMD4-224ENST00000568877 LCE1CQ5T751 118 aa3.86□□□□□ -1.79
COMMD4-224ENST00000568877 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.57□□□□□ -1.84
COMMD4-224ENST00000568877 A0A0A0MQY5 61 aa3.47□□□□□ -1.85
COMMD4-224ENST00000568877 KRTAP5-11Q6L8G4 156 aa3.46□□□□□ -1.86
COMMD4-224ENST00000568877 INE1O15225 51 aa3.38□□□□□ -1.87
COMMD4-224ENST00000568877 KRTAP4-12Q9BQ66 201 aa3.38□□□□□ -1.87
COMMD4-224ENST00000568877 KRTAP21-2Q3LI59 83 aa3.32□□□□□ -1.88
COMMD4-224ENST00000568877 LCE1FQ5T754 118 aa3.27□□□□□ -1.89
COMMD4-224ENST00000568877 PRM1P04553 51 aa3.21□□□□□ -1.9
COMMD4-224ENST00000568877 H3BS24 57 aa3.02□□□□□ -1.93
COMMD4-224ENST00000568877 PHGR1C9JFL3 82 aa2.98□□□□□ -1.93
COMMD4-224ENST00000568877 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
COMMD4-224ENST00000568877 MUC19Q7Z5P9 8384 aa2.69□□□□□ -1.98
COMMD4-224ENST00000568877 KRTAP21-1Q3LI58 79 aa2.11□□□□□ -2.07
COMMD4-224ENST00000568877 MUC16Q8WXI7 14507 aa1.87□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 177.5 ms