RNA–Protein interactions for RNA: ENST00000568865.2

CNN2-209, Transcript of calponin 2, humanhuman

TSL 5

Gene CNN2, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-209ENST00000568865 LCE3BQ5TA77 95 aa6.96□□□□□ -1.3
CNN2-209ENST00000568865 LCE5AQ5TCM9 118 aa6.94□□□□□ -1.3
CNN2-209ENST00000568865 KRTAP2-2Q9BYT5 123 aa6.94□□□□□ -1.3
CNN2-209ENST00000568865 KRTAP2-1Q9BYU5 128 aa6.94□□□□□ -1.3
CNN2-209ENST00000568865 KRTAP23-1A1A580 65 aa6.89□□□□□ -1.31
CNN2-209ENST00000568865 DSTQ03001 7570 aaKnown RBP6.83□□□□□ -1.32
CNN2-209ENST00000568865 KRTAP25-1Q3LHN0 102 aa6.82□□□□□ -1.32
CNN2-209ENST00000568865 MT1LQ93083 61 aa6.81□□□□□ -1.32
CNN2-209ENST00000568865 MT1GP13640 62 aa6.8□□□□□ -1.32
CNN2-209ENST00000568865 PP632Q6XCG6 107 aa6.77□□□□□ -1.32
CNN2-209ENST00000568865 KRTAP12-3P60328 96 aa6.75□□□□□ -1.33
CNN2-209ENST00000568865 MT1MQ8N339 61 aa6.75□□□□□ -1.33
CNN2-209ENST00000568865 CDC42SE1Q9NRR8 79 aa6.67□□□□□ -1.34
CNN2-209ENST00000568865 A0A0A0MQY5 61 aa6.58□□□□□ -1.36
CNN2-209ENST00000568865 KRTAP4-3Q9BYR4 195 aa6.58□□□□□ -1.36
CNN2-209ENST00000568865 ROMO1P60602 79 aa6.57□□□□□ -1.36
CNN2-209ENST00000568865 KRTAP19-4Q3LI73 84 aa6.54□□□□□ -1.36
CNN2-209ENST00000568865 KRTAP4-7Q9BYR0 210 aa6.5□□□□□ -1.37
CNN2-209ENST00000568865 KRTAP4-9Q9BYQ8 210 aa6.41□□□□□ -1.38
CNN2-209ENST00000568865 KRTAP15-1Q3LI76 137 aa6.36□□□□□ -1.39
CNN2-209ENST00000568865 LCE4AQ5TA78 99 aa6.33□□□□□ -1.4
CNN2-209ENST00000568865 LCE1DQ5T752 114 aa6.28□□□□□ -1.4
CNN2-209ENST00000568865 MT4P47944 62 aa6.27□□□□□ -1.41
CNN2-209ENST00000568865 BRK1Q8WUW1 75 aa6.25□□□□□ -1.41
CNN2-209ENST00000568865 KRTAP5-4Q6L8H1 288 aa6.25□□□□□ -1.41
CNN2-209ENST00000568865 HMCN1Q96RW7 5635 aa6.24□□□□□ -1.41
CNN2-209ENST00000568865 LCE3CQ5T5A8 94 aa6.21□□□□□ -1.42
CNN2-209ENST00000568865 LOC100996750A0A140TA64 210 aa6.15□□□□□ -1.43
CNN2-209ENST00000568865 GPR98Q8WXG9 6306 aa6.14□□□□□ -1.43
CNN2-209ENST00000568865 KRTAP5-5Q701N2 237 aaPredicted RBP6.13□□□□□ -1.43
CNN2-209ENST00000568865 KRTAP4-6Q9BYQ5 205 aa6.08□□□□□ -1.44
CNN2-209ENST00000568865 SYNE1Q8NF91 8797 aaKnown RBP5.99□□□□□ -1.45
CNN2-209ENST00000568865 AHNAK2Q8IVF2 5795 aa5.92□□□□□ -1.46
CNN2-209ENST00000568865 KRTAP12-4P60329 112 aa5.91□□□□□ -1.46
CNN2-209ENST00000568865 KRTAP20-2Q3LI61 65 aa5.91□□□□□ -1.46
CNN2-209ENST00000568865 SPRR5A0A1B0GTR4 108 aa5.87□□□□□ -1.47
CNN2-209ENST00000568865 KRTAP9-6A8MVA2 160 aa5.87□□□□□ -1.47
CNN2-209ENST00000568865 PMAIP1Q13794 54 aa5.84□□□□□ -1.47
CNN2-209ENST00000568865 MT1AP04731 61 aa5.8□□□□□ -1.48
CNN2-209ENST00000568865 KRTAP6-1Q3LI64 71 aa5.75□□□□□ -1.49
CNN2-209ENST00000568865 KRTAP4-12Q9BQ66 201 aa5.75□□□□□ -1.49
CNN2-209ENST00000568865 KRTAP5-10Q6L8G5 202 aa5.7□□□□□ -1.5
CNN2-209ENST00000568865 KRTAP5-3Q6L8H2 238 aa5.7□□□□□ -1.5
CNN2-209ENST00000568865 PRAC1Q96KF2 57 aa5.64□□□□□ -1.51
CNN2-209ENST00000568865 KRTAP9-4Q9BYQ2 154 aa5.61□□□□□ -1.51
CNN2-209ENST00000568865 PRO0628Q9UI54 55 aa5.58□□□□□ -1.52
CNN2-209ENST00000568865 KRTAP5-2Q701N4 177 aa5.52□□□□□ -1.53
CNN2-209ENST00000568865 KRTAP9-9Q9BYP9 154 aa5.52□□□□□ -1.53
CNN2-209ENST00000568865 KRTAP6-2Q3LI66 62 aa5.46□□□□□ -1.54
CNN2-209ENST00000568865 KRTAP5-7Q6L8G8 165 aa5.43□□□□□ -1.54
CNN2-209ENST00000568865 KTN1-AS1Q86SY8 53 aa5.33□□□□□ -1.56
CNN2-209ENST00000568865 KRTAP4-11Q9BYQ6 195 aa5.31□□□□□ -1.56
CNN2-209ENST00000568865 MT3P25713 68 aa5.27□□□□□ -1.57
CNN2-209ENST00000568865 OBSCNQ5VST9 7968 aa5.24□□□□□ -1.57
CNN2-209ENST00000568865 KRTAP5-8O75690 187 aa5.14□□□□□ -1.59
CNN2-209ENST00000568865 NDUFAF8A1L188 74 aa5.05□□□□□ -1.6
CNN2-209ENST00000568865 MUC5ACP98088 5654 aa4.9□□□□□ -1.62
CNN2-209ENST00000568865 KRTAP5-1Q6L8H4 278 aa4.9□□□□□ -1.63
CNN2-209ENST00000568865 MUC5BQ9HC84 5762 aaPredicted RBP4.84□□□□□ -1.63
CNN2-209ENST00000568865 AHNAKQ09666 5890 aaKnown RBP4.81□□□□□ -1.64
CNN2-209ENST00000568865 LCE1EQ5T753 118 aa4.75□□□□□ -1.65
CNN2-209ENST00000568865 LUZP6Q538Z0 58 aa4.7□□□□□ -1.66
CNN2-209ENST00000568865 KRTAP4-2Q9BYR5 136 aa4.65□□□□□ -1.67
CNN2-209ENST00000568865 LCE1BQ5T7P3 118 aa4.53□□□□□ -1.68
CNN2-209ENST00000568865 LCE3DQ9BYE3 92 aa4.52□□□□□ -1.69
CNN2-209ENST00000568865 LCE1CQ5T751 118 aa4.43□□□□□ -1.7
CNN2-209ENST00000568865 LCE3EQ5T5B0 92 aa4.3□□□□□ -1.72
CNN2-209ENST00000568865 LCE1FQ5T754 118 aa4.24□□□□□ -1.73
CNN2-209ENST00000568865 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.06□□□□□ -1.76
CNN2-209ENST00000568865 KRTAP5-11Q6L8G4 156 aa4□□□□□ -1.77
CNN2-209ENST00000568865 KRTAP21-2Q3LI59 83 aa3.77□□□□□ -1.81
CNN2-209ENST00000568865 KRTAP4-4Q9BYR3 166 aa3.45□□□□□ -1.86
CNN2-209ENST00000568865 PHGR1C9JFL3 82 aa3.44□□□□□ -1.86
CNN2-209ENST00000568865 PRM1P04553 51 aa3.4□□□□□ -1.87
CNN2-209ENST00000568865 MUC19Q7Z5P9 8384 aa3.22□□□□□ -1.89
CNN2-209ENST00000568865 INE1O15225 51 aa3.19□□□□□ -1.9
CNN2-209ENST00000568865 KRTAP21-1Q3LI58 79 aa2.5□□□□□ -2.01
CNN2-209ENST00000568865 MUC16Q8WXI7 14507 aa2.26□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 11.7 ms