RNA–Protein interactions for RNA: ENST00000568799.1

GGA2-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 5

Gene GGA2, Length 1,403 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-212ENST00000568799 TNP1P09430 55 aa7.79□□□□□ -1.16
GGA2-212ENST00000568799 DSTQ03001 7570 aaKnown RBP7.78□□□□□ -1.16
GGA2-212ENST00000568799 BRK1Q8WUW1 75 aa7.74□□□□□ -1.17
GGA2-212ENST00000568799 KRTAP19-5Q3LI72 72 aa7.73□□□□□ -1.17
GGA2-212ENST00000568799 KRTAP25-1Q3LHN0 102 aa7.68□□□□□ -1.18
GGA2-212ENST00000568799 MT1GP13640 62 aa7.64□□□□□ -1.19
GGA2-212ENST00000568799 PP632Q6XCG6 107 aa7.64□□□□□ -1.19
GGA2-212ENST00000568799 ROMO1P60602 79 aa7.62□□□□□ -1.19
GGA2-212ENST00000568799 LCE3AQ5TA76 89 aa7.56□□□□□ -1.2
GGA2-212ENST00000568799 MT1LQ93083 61 aa7.5□□□□□ -1.21
GGA2-212ENST00000568799 MT1MQ8N339 61 aa7.48□□□□□ -1.21
GGA2-212ENST00000568799 KRTAP23-1A1A580 65 aa7.45□□□□□ -1.22
GGA2-212ENST00000568799 KRTAP4-9Q9BYQ8 210 aa7.44□□□□□ -1.22
GGA2-212ENST00000568799 PRO0628Q9UI54 55 aa7.33□□□□□ -1.24
GGA2-212ENST00000568799 GPR98Q8WXG9 6306 aa7.32□□□□□ -1.24
GGA2-212ENST00000568799 PMAIP1Q13794 54 aa7.32□□□□□ -1.24
GGA2-212ENST00000568799 KRTAP12-3P60328 96 aa7.3□□□□□ -1.24
GGA2-212ENST00000568799 LCE4AQ5TA78 99 aa7.3□□□□□ -1.24
GGA2-212ENST00000568799 LCE1DQ5T752 114 aa7.27□□□□□ -1.25
GGA2-212ENST00000568799 KRTAP4-3Q9BYR4 195 aa7.27□□□□□ -1.25
GGA2-212ENST00000568799 MT4P47944 62 aa7.22□□□□□ -1.25
GGA2-212ENST00000568799 HMCN1Q96RW7 5635 aa7.2□□□□□ -1.26
GGA2-212ENST00000568799 KRTAP4-7Q9BYR0 210 aa7.1□□□□□ -1.27
GGA2-212ENST00000568799 KRTAP5-4Q6L8H1 288 aa7.1□□□□□ -1.27
GGA2-212ENST00000568799 KRTAP15-1Q3LI76 137 aa7.01□□□□□ -1.29
GGA2-212ENST00000568799 KRTAP19-4Q3LI73 84 aa6.97□□□□□ -1.29
GGA2-212ENST00000568799 KRTAP4-6Q9BYQ5 205 aa6.96□□□□□ -1.3
GGA2-212ENST00000568799 AHNAK2Q8IVF2 5795 aa6.91□□□□□ -1.3
GGA2-212ENST00000568799 PRAC1Q96KF2 57 aa6.89□□□□□ -1.31
GGA2-212ENST00000568799 KTN1-AS1Q86SY8 53 aa6.85□□□□□ -1.31
GGA2-212ENST00000568799 KRTAP5-5Q701N2 237 aaPredicted RBP6.82□□□□□ -1.32
GGA2-212ENST00000568799 LCE3CQ5T5A8 94 aa6.77□□□□□ -1.33
GGA2-212ENST00000568799 KRTAP12-4P60329 112 aa6.76□□□□□ -1.33
GGA2-212ENST00000568799 LOC100996750A0A140TA64 210 aa6.74□□□□□ -1.33
GGA2-212ENST00000568799 KRTAP20-2Q3LI61 65 aa6.73□□□□□ -1.33
GGA2-212ENST00000568799 KRTAP5-10Q6L8G5 202 aa6.73□□□□□ -1.33
GGA2-212ENST00000568799 SPRR5A0A1B0GTR4 108 aa6.72□□□□□ -1.33
GGA2-212ENST00000568799 SYNE1Q8NF91 8797 aaKnown RBP6.64□□□□□ -1.35
GGA2-212ENST00000568799 KRTAP5-3Q6L8H2 238 aa6.59□□□□□ -1.35
GGA2-212ENST00000568799 KRTAP5-7Q6L8G8 165 aa6.48□□□□□ -1.37
GGA2-212ENST00000568799 SVIPQ8NHG7 77 aa6.43□□□□□ -1.38
GGA2-212ENST00000568799 MT1AP04731 61 aa6.4□□□□□ -1.39
GGA2-212ENST00000568799 KRTAP9-6A8MVA2 160 aa6.37□□□□□ -1.39
GGA2-212ENST00000568799 KRTAP6-1Q3LI64 71 aa6.33□□□□□ -1.4
GGA2-212ENST00000568799 KRTAP5-2Q701N4 177 aa6.22□□□□□ -1.41
GGA2-212ENST00000568799 KRTAP9-4Q9BYQ2 154 aa6.17□□□□□ -1.42
GGA2-212ENST00000568799 KRTAP4-11Q9BYQ6 195 aa6.16□□□□□ -1.42
GGA2-212ENST00000568799 KRTAP6-2Q3LI66 62 aa6.08□□□□□ -1.44
GGA2-212ENST00000568799 OBSCNQ5VST9 7968 aa5.94□□□□□ -1.46
GGA2-212ENST00000568799 KRTAP5-8O75690 187 aa5.91□□□□□ -1.46
GGA2-212ENST00000568799 MT3P25713 68 aa5.89□□□□□ -1.47
GGA2-212ENST00000568799 MUC5BQ9HC84 5762 aaPredicted RBP5.73□□□□□ -1.49
GGA2-212ENST00000568799 LUZP6Q538Z0 58 aa5.73□□□□□ -1.49
GGA2-212ENST00000568799 AHNAKQ09666 5890 aaKnown RBP5.72□□□□□ -1.49
GGA2-212ENST00000568799 KRTAP9-9Q9BYP9 154 aa5.68□□□□□ -1.5
GGA2-212ENST00000568799 MUC5ACP98088 5654 aa5.68□□□□□ -1.5
GGA2-212ENST00000568799 KRTAP5-1Q6L8H4 278 aa5.57□□□□□ -1.52
GGA2-212ENST00000568799 LCE1EQ5T753 118 aa5.38□□□□□ -1.55
GGA2-212ENST00000568799 NDUFAF8A1L188 74 aa5.18□□□□□ -1.58
GGA2-212ENST00000568799 LCE1BQ5T7P3 118 aa5.1□□□□□ -1.59
GGA2-212ENST00000568799 KRTAP4-2Q9BYR5 136 aa5.04□□□□□ -1.6
GGA2-212ENST00000568799 LCE1CQ5T751 118 aa4.99□□□□□ -1.61
GGA2-212ENST00000568799 LCE3DQ9BYE3 92 aa4.99□□□□□ -1.61
GGA2-212ENST00000568799 LCE3EQ5T5B0 92 aa4.8□□□□□ -1.64
GGA2-212ENST00000568799 KRTAP4-12Q9BQ66 201 aa4.6□□□□□ -1.67
GGA2-212ENST00000568799 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.52□□□□□ -1.69
GGA2-212ENST00000568799 KRTAP5-11Q6L8G4 156 aa4.51□□□□□ -1.69
GGA2-212ENST00000568799 A0A0A0MQY5 61 aa4.42□□□□□ -1.7
GGA2-212ENST00000568799 LCE1FQ5T754 118 aa4.41□□□□□ -1.7
GGA2-212ENST00000568799 INE1O15225 51 aa4.3□□□□□ -1.72
GGA2-212ENST00000568799 KRTAP21-2Q3LI59 83 aa4.16□□□□□ -1.74
GGA2-212ENST00000568799 PHGR1C9JFL3 82 aa3.96□□□□□ -1.77
GGA2-212ENST00000568799 PRM1P04553 51 aa3.92□□□□□ -1.78
GGA2-212ENST00000568799 KRTAP4-4Q9BYR3 166 aa3.83□□□□□ -1.8
GGA2-212ENST00000568799 MUC19Q7Z5P9 8384 aa3.66□□□□□ -1.82
GGA2-212ENST00000568799 H3BS24 57 aa3.64□□□□□ -1.83
GGA2-212ENST00000568799 KRTAP21-1Q3LI58 79 aa3.02□□□□□ -1.93
GGA2-212ENST00000568799 MUC16Q8WXI7 14507 aa2.53□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 80.3 ms