RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 KRTAP19-5Q3LI72 72 aa5.65□□□□□ -1.5
HERPUD1-215ENST00000568676 KRTAP5-10Q6L8G5 202 aa5.65□□□□□ -1.5
HERPUD1-215ENST00000568676 MT1MQ8N339 61 aa5.62□□□□□ -1.51
HERPUD1-215ENST00000568676 SMIM26A0A096LP01 95 aa5.61□□□□□ -1.51
HERPUD1-215ENST00000568676 KRTAP5-4Q6L8H1 288 aa5.61□□□□□ -1.51
HERPUD1-215ENST00000568676 AHNAK2Q8IVF2 5795 aa5.61□□□□□ -1.51
HERPUD1-215ENST00000568676 LINC01558Q9Y6Z2 57 aa5.6□□□□□ -1.51
HERPUD1-215ENST00000568676 SPINT4Q6UDR6 99 aa5.58□□□□□ -1.52
HERPUD1-215ENST00000568676 SVIPQ8NHG7 77 aa5.57□□□□□ -1.52
HERPUD1-215ENST00000568676 MT1LQ93083 61 aa5.56□□□□□ -1.52
HERPUD1-215ENST00000568676 KRTAP12-1P59990 96 aa5.51□□□□□ -1.53
HERPUD1-215ENST00000568676 KRTAP5-7Q6L8G8 165 aa5.51□□□□□ -1.53
HERPUD1-215ENST00000568676 A8MU10 97 aa5.47□□□□□ -1.53
HERPUD1-215ENST00000568676 UQCR11O14957 56 aa5.46□□□□□ -1.54
HERPUD1-215ENST00000568676 V9GYY9 64 aa5.46□□□□□ -1.54
HERPUD1-215ENST00000568676 KRTAP5-3Q6L8H2 238 aa5.43□□□□□ -1.54
HERPUD1-215ENST00000568676 KRTAP4-3Q9BYR4 195 aa5.43□□□□□ -1.54
HERPUD1-215ENST00000568676 PCP4P48539 62 aa5.39□□□□□ -1.55
HERPUD1-215ENST00000568676 KRTAP4-2Q9BYR5 136 aa5.39□□□□□ -1.55
HERPUD1-215ENST00000568676 H3BS24 57 aa5.38□□□□□ -1.55
HERPUD1-215ENST00000568676 C10orf95Q9H7T3 257 aa5.38□□□□□ -1.55
HERPUD1-215ENST00000568676 Q1T7F1 81 aa5.37□□□□□ -1.55
HERPUD1-215ENST00000568676 KRTAP4-11Q9BYQ6 195 aa5.35□□□□□ -1.55
HERPUD1-215ENST00000568676 LCE3AQ5TA76 89 aa5.34□□□□□ -1.55
HERPUD1-215ENST00000568676 MIR22HGQ0VDD5 57 aa5.33□□□□□ -1.56
HERPUD1-215ENST00000568676 PSPHP1O15172 72 aa5.32□□□□□ -1.56
HERPUD1-215ENST00000568676 TNP1P09430 55 aa5.31□□□□□ -1.56
HERPUD1-215ENST00000568676 KRTAP20-2Q3LI61 65 aa5.31□□□□□ -1.56
HERPUD1-215ENST00000568676 SPRR5A0A1B0GTR4 108 aa5.3□□□□□ -1.56
HERPUD1-215ENST00000568676 RPS28P62857 69 aaKnown RBP5.28□□□□□ -1.56
HERPUD1-215ENST00000568676 K7ERS5 55 aa5.27□□□□□ -1.57
HERPUD1-215ENST00000568676 KRTAP12-4P60329 112 aa5.22□□□□□ -1.57
HERPUD1-215ENST00000568676 KRTAP5-5Q701N2 237 aaPredicted RBP5.21□□□□□ -1.58
HERPUD1-215ENST00000568676 A6NED7 52 aa5.19□□□□□ -1.58
HERPUD1-215ENST00000568676 KRTAP12-3P60328 96 aa5.17□□□□□ -1.58
HERPUD1-215ENST00000568676 KRTAP25-1Q3LHN0 102 aa5.07□□□□□ -1.6
HERPUD1-215ENST00000568676 CDC42SE1Q9NRR8 79 aa4.99□□□□□ -1.61
HERPUD1-215ENST00000568676 SYNE1Q8NF91 8797 aaKnown RBP4.96□□□□□ -1.61
HERPUD1-215ENST00000568676 KRTAP23-1A1A580 65 aa4.9□□□□□ -1.63
HERPUD1-215ENST00000568676 ROMO1P60602 79 aa4.88□□□□□ -1.63
HERPUD1-215ENST00000568676 KRTAP5-2Q701N4 177 aa4.85□□□□□ -1.63
HERPUD1-215ENST00000568676 KRTAP5-8O75690 187 aa4.78□□□□□ -1.64
HERPUD1-215ENST00000568676 MUC5ACP98088 5654 aa4.76□□□□□ -1.65
HERPUD1-215ENST00000568676 MT1AP04731 61 aa4.74□□□□□ -1.65
HERPUD1-215ENST00000568676 LCE3CQ5T5A8 94 aa4.72□□□□□ -1.65
HERPUD1-215ENST00000568676 AHNAKQ09666 5890 aaKnown RBP4.71□□□□□ -1.66
HERPUD1-215ENST00000568676 KRTAP6-1Q3LI64 71 aa4.7□□□□□ -1.66
HERPUD1-215ENST00000568676 KRTAP15-1Q3LI76 137 aa4.7□□□□□ -1.66
HERPUD1-215ENST00000568676 MUC5BQ9HC84 5762 aaPredicted RBP4.69□□□□□ -1.66
HERPUD1-215ENST00000568676 BRK1Q8WUW1 75 aa4.67□□□□□ -1.66
HERPUD1-215ENST00000568676 KRTAP6-2Q3LI66 62 aa4.57□□□□□ -1.68
HERPUD1-215ENST00000568676 OBSCNQ5VST9 7968 aa4.56□□□□□ -1.68
HERPUD1-215ENST00000568676 PMAIP1Q13794 54 aa4.42□□□□□ -1.7
HERPUD1-215ENST00000568676 KRTAP9-6A8MVA2 160 aa4.4□□□□□ -1.71
HERPUD1-215ENST00000568676 KRTAP5-1Q6L8H4 278 aa4.4□□□□□ -1.71
HERPUD1-215ENST00000568676 MT3P25713 68 aa4.38□□□□□ -1.71
HERPUD1-215ENST00000568676 A0A0A0MQY5 61 aa4.24□□□□□ -1.73
HERPUD1-215ENST00000568676 PRO0628Q9UI54 55 aa4.24□□□□□ -1.73
HERPUD1-215ENST00000568676 LCE1EQ5T753 118 aa4.15□□□□□ -1.75
HERPUD1-215ENST00000568676 PRAC1Q96KF2 57 aa4.14□□□□□ -1.75
HERPUD1-215ENST00000568676 KTN1-AS1Q86SY8 53 aa4.02□□□□□ -1.77
HERPUD1-215ENST00000568676 LCE1BQ5T7P3 118 aa3.85□□□□□ -1.79
HERPUD1-215ENST00000568676 LCE1CQ5T751 118 aa3.83□□□□□ -1.8
HERPUD1-215ENST00000568676 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.61□□□□□ -1.83
HERPUD1-215ENST00000568676 LUZP6Q538Z0 58 aa3.59□□□□□ -1.83
HERPUD1-215ENST00000568676 LCE1FQ5T754 118 aa3.54□□□□□ -1.84
HERPUD1-215ENST00000568676 KRTAP5-11Q6L8G4 156 aa3.53□□□□□ -1.84
HERPUD1-215ENST00000568676 LCE3DQ9BYE3 92 aa3.35□□□□□ -1.87
HERPUD1-215ENST00000568676 PHGR1C9JFL3 82 aa3.31□□□□□ -1.88
HERPUD1-215ENST00000568676 LCE3EQ5T5B0 92 aa3.19□□□□□ -1.9
HERPUD1-215ENST00000568676 KRTAP21-2Q3LI59 83 aa3.11□□□□□ -1.91
HERPUD1-215ENST00000568676 NDUFAF8A1L188 74 aa2.99□□□□□ -1.93
HERPUD1-215ENST00000568676 KRTAP4-4Q9BYR3 166 aa2.99□□□□□ -1.93
HERPUD1-215ENST00000568676 MUC19Q7Z5P9 8384 aa2.82□□□□□ -1.96
HERPUD1-215ENST00000568676 KRTAP21-1Q3LI58 79 aa2.56□□□□□ -2
HERPUD1-215ENST00000568676 INE1O15225 51 aa2.49□□□□□ -2.01
HERPUD1-215ENST00000568676 PRM1P04553 51 aa2.49□□□□□ -2.01
HERPUD1-215ENST00000568676 MUC16Q8WXI7 14507 aa2.01□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 7.5 ms