RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 MT1EP04732 61 aa4.81□□□□□ -1.64
TSC2-220ENST00000568238 LCE5AQ5TCM9 118 aa4.8□□□□□ -1.64
TSC2-220ENST00000568238 KRTAP19-3Q7Z4W3 81 aa4.79□□□□□ -1.64
TSC2-220ENST00000568238 LCE3AQ5TA76 89 aa4.75□□□□□ -1.65
TSC2-220ENST00000568238 BRK1Q8WUW1 75 aa4.74□□□□□ -1.65
TSC2-220ENST00000568238 GPR98Q8WXG9 6306 aa4.73□□□□□ -1.65
TSC2-220ENST00000568238 KRTAP25-1Q3LHN0 102 aa4.71□□□□□ -1.66
TSC2-220ENST00000568238 KRTAP19-5Q3LI72 72 aa4.71□□□□□ -1.66
TSC2-220ENST00000568238 ROMO1P60602 79 aa4.65□□□□□ -1.67
TSC2-220ENST00000568238 MT1GP13640 62 aa4.64□□□□□ -1.67
TSC2-220ENST00000568238 KRTAP4-9Q9BYQ8 210 aa4.64□□□□□ -1.67
TSC2-220ENST00000568238 PP632Q6XCG6 107 aa4.63□□□□□ -1.67
TSC2-220ENST00000568238 PRO0628Q9UI54 55 aa4.59□□□□□ -1.67
TSC2-220ENST00000568238 MT1MQ8N339 61 aa4.58□□□□□ -1.68
TSC2-220ENST00000568238 HMCN1Q96RW7 5635 aa4.58□□□□□ -1.68
TSC2-220ENST00000568238 MT1LQ93083 61 aa4.57□□□□□ -1.68
TSC2-220ENST00000568238 KRTAP12-3P60328 96 aa4.55□□□□□ -1.68
TSC2-220ENST00000568238 LCE1DQ5T752 114 aa4.54□□□□□ -1.68
TSC2-220ENST00000568238 KRTAP23-1A1A580 65 aa4.51□□□□□ -1.69
TSC2-220ENST00000568238 LCE4AQ5TA78 99 aa4.51□□□□□ -1.69
TSC2-220ENST00000568238 MT4P47944 62 aa4.48□□□□□ -1.69
TSC2-220ENST00000568238 AHNAK2Q8IVF2 5795 aa4.47□□□□□ -1.69
TSC2-220ENST00000568238 KRTAP4-3Q9BYR4 195 aa4.46□□□□□ -1.7
TSC2-220ENST00000568238 PMAIP1Q13794 54 aa4.45□□□□□ -1.7
TSC2-220ENST00000568238 KRTAP5-4Q6L8H1 288 aa4.4□□□□□ -1.71
TSC2-220ENST00000568238 KRTAP15-1Q3LI76 137 aa4.34□□□□□ -1.71
TSC2-220ENST00000568238 KRTAP4-7Q9BYR0 210 aa4.34□□□□□ -1.71
TSC2-220ENST00000568238 KRTAP4-6Q9BYQ5 205 aa4.32□□□□□ -1.72
TSC2-220ENST00000568238 KTN1-AS1Q86SY8 53 aa4.27□□□□□ -1.73
TSC2-220ENST00000568238 PRAC1Q96KF2 57 aa4.27□□□□□ -1.73
TSC2-220ENST00000568238 KRTAP5-10Q6L8G5 202 aa4.26□□□□□ -1.73
TSC2-220ENST00000568238 KRTAP19-4Q3LI73 84 aa4.23□□□□□ -1.73
TSC2-220ENST00000568238 LCE3CQ5T5A8 94 aa4.22□□□□□ -1.73
TSC2-220ENST00000568238 KRTAP5-5Q701N2 237 aaPredicted RBP4.21□□□□□ -1.74
TSC2-220ENST00000568238 KRTAP20-2Q3LI61 65 aa4.18□□□□□ -1.74
TSC2-220ENST00000568238 SPRR5A0A1B0GTR4 108 aa4.14□□□□□ -1.75
TSC2-220ENST00000568238 KRTAP5-3Q6L8H2 238 aa4.14□□□□□ -1.75
TSC2-220ENST00000568238 KRTAP12-4P60329 112 aa4.13□□□□□ -1.75
TSC2-220ENST00000568238 SYNE1Q8NF91 8797 aaKnown RBP4.13□□□□□ -1.75
TSC2-220ENST00000568238 LOC100996750A0A140TA64 210 aa4.11□□□□□ -1.75
TSC2-220ENST00000568238 KRTAP5-7Q6L8G8 165 aa4.11□□□□□ -1.75
TSC2-220ENST00000568238 KRTAP9-6A8MVA2 160 aa3.98□□□□□ -1.77
TSC2-220ENST00000568238 MT1AP04731 61 aa3.89□□□□□ -1.79
TSC2-220ENST00000568238 KRTAP6-1Q3LI64 71 aa3.87□□□□□ -1.79
TSC2-220ENST00000568238 KRTAP5-2Q701N4 177 aa3.85□□□□□ -1.79
TSC2-220ENST00000568238 KRTAP4-11Q9BYQ6 195 aa3.83□□□□□ -1.8
TSC2-220ENST00000568238 KRTAP9-4Q9BYQ2 154 aa3.75□□□□□ -1.81
TSC2-220ENST00000568238 KRTAP6-2Q3LI66 62 aa3.72□□□□□ -1.81
TSC2-220ENST00000568238 AHNAKQ09666 5890 aaKnown RBP3.72□□□□□ -1.81
TSC2-220ENST00000568238 MUC5BQ9HC84 5762 aaPredicted RBP3.69□□□□□ -1.82
TSC2-220ENST00000568238 KRTAP5-8O75690 187 aa3.69□□□□□ -1.82
TSC2-220ENST00000568238 MUC5ACP98088 5654 aa3.66□□□□□ -1.82
TSC2-220ENST00000568238 OBSCNQ5VST9 7968 aa3.65□□□□□ -1.83
TSC2-220ENST00000568238 MT3P25713 68 aa3.56□□□□□ -1.84
TSC2-220ENST00000568238 KRTAP9-9Q9BYP9 154 aa3.54□□□□□ -1.84
TSC2-220ENST00000568238 KRTAP5-1Q6L8H4 278 aa3.47□□□□□ -1.85
TSC2-220ENST00000568238 LUZP6Q538Z0 58 aa3.44□□□□□ -1.86
TSC2-220ENST00000568238 NDUFAF8A1L188 74 aa3.34□□□□□ -1.87
TSC2-220ENST00000568238 H3BS24 57 aa3.34□□□□□ -1.87
TSC2-220ENST00000568238 LCE1EQ5T753 118 aa3.28□□□□□ -1.88
TSC2-220ENST00000568238 KRTAP4-2Q9BYR5 136 aa3.12□□□□□ -1.91
TSC2-220ENST00000568238 LCE1BQ5T7P3 118 aa3.11□□□□□ -1.91
TSC2-220ENST00000568238 LCE3DQ9BYE3 92 aa3.1□□□□□ -1.91
TSC2-220ENST00000568238 LCE1CQ5T751 118 aa3.05□□□□□ -1.92
TSC2-220ENST00000568238 LCE3EQ5T5B0 92 aa2.95□□□□□ -1.94
TSC2-220ENST00000568238 A0A0A0MQY5 61 aa2.86□□□□□ -1.95
TSC2-220ENST00000568238 KRTAP4-12Q9BQ66 201 aa2.85□□□□□ -1.95
TSC2-220ENST00000568238 KRTAP5-11Q6L8G4 156 aa2.79□□□□□ -1.96
TSC2-220ENST00000568238 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.77□□□□□ -1.97
TSC2-220ENST00000568238 LCE1FQ5T754 118 aa2.72□□□□□ -1.97
TSC2-220ENST00000568238 INE1O15225 51 aa2.69□□□□□ -1.98
TSC2-220ENST00000568238 KRTAP21-2Q3LI59 83 aa2.55□□□□□ -2
TSC2-220ENST00000568238 PHGR1C9JFL3 82 aa2.52□□□□□ -2.01
TSC2-220ENST00000568238 PRM1P04553 51 aa2.41□□□□□ -2.02
TSC2-220ENST00000568238 KRTAP4-4Q9BYR3 166 aa2.34□□□□□ -2.03
TSC2-220ENST00000568238 MUC19Q7Z5P9 8384 aa2.28□□□□□ -2.04
TSC2-220ENST00000568238 KRTAP21-1Q3LI58 79 aa1.91□□□□□ -2.1
TSC2-220ENST00000568238 MUC16Q8WXI7 14507 aa1.64□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 36 ms