RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 KRTAP23-1A1A580 65 aa5.77□□□□□ -1.49
SPG7-218ENST00000568205 KRTAP12-3P60328 96 aa5.71□□□□□ -1.5
SPG7-218ENST00000568205 PMAIP1Q13794 54 aa5.67□□□□□ -1.5
SPG7-218ENST00000568205 PP632Q6XCG6 107 aa5.67□□□□□ -1.5
SPG7-218ENST00000568205 KRTAP19-3Q7Z4W3 81 aa5.66□□□□□ -1.5
SPG7-218ENST00000568205 PRO0628Q9UI54 55 aa5.65□□□□□ -1.5
SPG7-218ENST00000568205 MT1LQ93083 61 aa5.63□□□□□ -1.51
SPG7-218ENST00000568205 SPRR2DP22532 72 aa5.61□□□□□ -1.51
SPG7-218ENST00000568205 LCE5AQ5TCM9 118 aa5.61□□□□□ -1.51
SPG7-218ENST00000568205 MT1GP13640 62 aa5.58□□□□□ -1.52
SPG7-218ENST00000568205 KRTAP2-3P0C7H8 128 aa5.53□□□□□ -1.52
SPG7-218ENST00000568205 KRTAP2-4Q9BYR9 128 aa5.53□□□□□ -1.52
SPG7-218ENST00000568205 MT1MQ8N339 61 aa5.49□□□□□ -1.53
SPG7-218ENST00000568205 KRTAP15-1Q3LI76 137 aa5.48□□□□□ -1.53
SPG7-218ENST00000568205 LCE3BQ5TA77 95 aa5.42□□□□□ -1.54
SPG7-218ENST00000568205 KRTAP19-4Q3LI73 84 aa5.4□□□□□ -1.54
SPG7-218ENST00000568205 H3BS24 57 aa5.37□□□□□ -1.55
SPG7-218ENST00000568205 PRAC1Q96KF2 57 aa5.37□□□□□ -1.55
SPG7-218ENST00000568205 KRTAP4-7Q9BYR0 210 aa5.37□□□□□ -1.55
SPG7-218ENST00000568205 KRTAP4-12Q9BQ66 201 aa5.36□□□□□ -1.55
SPG7-218ENST00000568205 KRTAP4-3Q9BYR4 195 aa5.35□□□□□ -1.55
SPG7-218ENST00000568205 KRTAP2-2Q9BYT5 123 aa5.34□□□□□ -1.55
SPG7-218ENST00000568205 KRTAP2-1Q9BYU5 128 aa5.34□□□□□ -1.55
SPG7-218ENST00000568205 DSTQ03001 7570 aaKnown RBP5.3□□□□□ -1.56
SPG7-218ENST00000568205 LCE3CQ5T5A8 94 aa5.29□□□□□ -1.56
SPG7-218ENST00000568205 KTN1-AS1Q86SY8 53 aa5.29□□□□□ -1.56
SPG7-218ENST00000568205 GPR98Q8WXG9 6306 aa5.15□□□□□ -1.58
SPG7-218ENST00000568205 KRTAP9-9Q9BYP9 154 aa5.12□□□□□ -1.59
SPG7-218ENST00000568205 KRTAP9-4Q9BYQ2 154 aa5.12□□□□□ -1.59
SPG7-218ENST00000568205 SVIPQ8NHG7 77 aa5.02□□□□□ -1.61
SPG7-218ENST00000568205 KRTAP9-6A8MVA2 160 aa4.99□□□□□ -1.61
SPG7-218ENST00000568205 LCE1DQ5T752 114 aa4.99□□□□□ -1.61
SPG7-218ENST00000568205 LCE4AQ5TA78 99 aa4.99□□□□□ -1.61
SPG7-218ENST00000568205 KRTAP5-5Q701N2 237 aaPredicted RBP4.99□□□□□ -1.61
SPG7-218ENST00000568205 KRTAP5-4Q6L8H1 288 aa4.98□□□□□ -1.61
SPG7-218ENST00000568205 KRTAP4-9Q9BYQ8 210 aa4.92□□□□□ -1.62
SPG7-218ENST00000568205 MT4P47944 62 aa4.87□□□□□ -1.63
SPG7-218ENST00000568205 SPRR5A0A1B0GTR4 108 aa4.84□□□□□ -1.63
SPG7-218ENST00000568205 SYNE1Q8NF91 8797 aaKnown RBP4.82□□□□□ -1.64
SPG7-218ENST00000568205 HMCN1Q96RW7 5635 aa4.81□□□□□ -1.64
SPG7-218ENST00000568205 MT1AP04731 61 aa4.8□□□□□ -1.64
SPG7-218ENST00000568205 KRTAP12-4P60329 112 aa4.75□□□□□ -1.65
SPG7-218ENST00000568205 KRTAP6-1Q3LI64 71 aa4.73□□□□□ -1.65
SPG7-218ENST00000568205 KRTAP20-2Q3LI61 65 aa4.67□□□□□ -1.66
SPG7-218ENST00000568205 KRTAP4-11Q9BYQ6 195 aa4.65□□□□□ -1.67
SPG7-218ENST00000568205 KRTAP4-2Q9BYR5 136 aa4.62□□□□□ -1.67
SPG7-218ENST00000568205 AHNAK2Q8IVF2 5795 aa4.61□□□□□ -1.67
SPG7-218ENST00000568205 KRTAP5-10Q6L8G5 202 aa4.53□□□□□ -1.68
SPG7-218ENST00000568205 KRTAP5-3Q6L8H2 238 aa4.51□□□□□ -1.69
SPG7-218ENST00000568205 KRTAP6-2Q3LI66 62 aa4.44□□□□□ -1.7
SPG7-218ENST00000568205 LUZP6Q538Z0 58 aa4.44□□□□□ -1.7
SPG7-218ENST00000568205 KRTAP5-2Q701N4 177 aa4.44□□□□□ -1.7
SPG7-218ENST00000568205 KRTAP5-7Q6L8G8 165 aa4.4□□□□□ -1.71
SPG7-218ENST00000568205 MT3P25713 68 aa4.36□□□□□ -1.71
SPG7-218ENST00000568205 OBSCNQ5VST9 7968 aa4.04□□□□□ -1.76
SPG7-218ENST00000568205 NDUFAF8A1L188 74 aa4.02□□□□□ -1.77
SPG7-218ENST00000568205 KRTAP5-8O75690 187 aa4□□□□□ -1.77
SPG7-218ENST00000568205 AHNAKQ09666 5890 aaKnown RBP3.92□□□□□ -1.78
SPG7-218ENST00000568205 LCE3DQ9BYE3 92 aa3.9□□□□□ -1.79
SPG7-218ENST00000568205 LCE1EQ5T753 118 aa3.89□□□□□ -1.79
SPG7-218ENST00000568205 KRTAP5-1Q6L8H4 278 aa3.89□□□□□ -1.79
SPG7-218ENST00000568205 MUC5ACP98088 5654 aa3.87□□□□□ -1.79
SPG7-218ENST00000568205 MUC5BQ9HC84 5762 aaPredicted RBP3.82□□□□□ -1.8
SPG7-218ENST00000568205 LCE3EQ5T5B0 92 aa3.75□□□□□ -1.81
SPG7-218ENST00000568205 LCE1BQ5T7P3 118 aa3.64□□□□□ -1.83
SPG7-218ENST00000568205 LCE1CQ5T751 118 aa3.61□□□□□ -1.83
SPG7-218ENST00000568205 A0A0A0MQY5 61 aa3.41□□□□□ -1.86
SPG7-218ENST00000568205 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.34□□□□□ -1.87
SPG7-218ENST00000568205 INE1O15225 51 aa3.3□□□□□ -1.88
SPG7-218ENST00000568205 KRTAP5-11Q6L8G4 156 aa3.24□□□□□ -1.89
SPG7-218ENST00000568205 KRTAP21-2Q3LI59 83 aa3.11□□□□□ -1.91
SPG7-218ENST00000568205 PRM1P04553 51 aa3.07□□□□□ -1.92
SPG7-218ENST00000568205 LCE1FQ5T754 118 aa3.03□□□□□ -1.92
SPG7-218ENST00000568205 KRTAP4-4Q9BYR3 166 aa2.79□□□□□ -1.96
SPG7-218ENST00000568205 PHGR1C9JFL3 82 aa2.78□□□□□ -1.96
SPG7-218ENST00000568205 MUC19Q7Z5P9 8384 aa2.51□□□□□ -2.01
SPG7-218ENST00000568205 KRTAP21-1Q3LI58 79 aa2.02□□□□□ -2.09
SPG7-218ENST00000568205 MUC16Q8WXI7 14507 aa1.82□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 25.2 ms