RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 PSPHP1O15172 72 aa4.9□□□□□ -1.63
CNOT1-213ENST00000568158 PCP4P48539 62 aa4.9□□□□□ -1.63
CNOT1-213ENST00000568158 Q1T7F1 81 aa4.9□□□□□ -1.63
CNOT1-213ENST00000568158 V9GYY9 64 aa4.9□□□□□ -1.63
CNOT1-213ENST00000568158 KRTAP2-3P0C7H8 128 aa4.89□□□□□ -1.63
CNOT1-213ENST00000568158 KRTAP2-4Q9BYR9 128 aa4.89□□□□□ -1.63
CNOT1-213ENST00000568158 MIR22HGQ0VDD5 57 aa4.88□□□□□ -1.63
CNOT1-213ENST00000568158 KRTAP19-7Q3SYF9 63 aa4.88□□□□□ -1.63
CNOT1-213ENST00000568158 SPRR2DP22532 72 aa4.86□□□□□ -1.63
CNOT1-213ENST00000568158 TNP1P09430 55 aa4.83□□□□□ -1.64
CNOT1-213ENST00000568158 KRTAP19-5Q3LI72 72 aa4.82□□□□□ -1.64
CNOT1-213ENST00000568158 MT1EP04732 61 aa4.81□□□□□ -1.64
CNOT1-213ENST00000568158 RPS28P62857 69 aaKnown RBP4.79□□□□□ -1.64
CNOT1-213ENST00000568158 LCE3AQ5TA76 89 aa4.78□□□□□ -1.64
CNOT1-213ENST00000568158 KRTAP19-3Q7Z4W3 81 aa4.74□□□□□ -1.65
CNOT1-213ENST00000568158 KRTAP2-2Q9BYT5 123 aa4.74□□□□□ -1.65
CNOT1-213ENST00000568158 KRTAP2-1Q9BYU5 128 aa4.74□□□□□ -1.65
CNOT1-213ENST00000568158 A6NED7 52 aa4.72□□□□□ -1.65
CNOT1-213ENST00000568158 K7ERS5 55 aa4.72□□□□□ -1.65
CNOT1-213ENST00000568158 MT1GP13640 62 aa4.65□□□□□ -1.67
CNOT1-213ENST00000568158 MT1LQ93083 61 aa4.64□□□□□ -1.67
CNOT1-213ENST00000568158 KRTAP25-1Q3LHN0 102 aa4.63□□□□□ -1.67
CNOT1-213ENST00000568158 DSTQ03001 7570 aaKnown RBP4.59□□□□□ -1.67
CNOT1-213ENST00000568158 KRTAP12-3P60328 96 aa4.58□□□□□ -1.68
CNOT1-213ENST00000568158 PP632Q6XCG6 107 aa4.58□□□□□ -1.68
CNOT1-213ENST00000568158 MT1MQ8N339 61 aa4.58□□□□□ -1.68
CNOT1-213ENST00000568158 KRTAP5-1Q6L8H4 278 aa4.53□□□□□ -1.68
CNOT1-213ENST00000568158 LCE1EQ5T753 118 aa4.52□□□□□ -1.69
CNOT1-213ENST00000568158 KRTAP4-3Q9BYR4 195 aa4.52□□□□□ -1.69
CNOT1-213ENST00000568158 CDC42SE1Q9NRR8 79 aa4.52□□□□□ -1.69
CNOT1-213ENST00000568158 ROMO1P60602 79 aa4.47□□□□□ -1.69
CNOT1-213ENST00000568158 KRTAP23-1A1A580 65 aa4.45□□□□□ -1.7
CNOT1-213ENST00000568158 KRTAP5-4Q6L8H1 288 aa4.45□□□□□ -1.7
CNOT1-213ENST00000568158 KRTAP4-4Q9BYR3 166 aa4.4□□□□□ -1.71
CNOT1-213ENST00000568158 MT4P47944 62 aa4.26□□□□□ -1.73
CNOT1-213ENST00000568158 LCE3CQ5T5A8 94 aa4.24□□□□□ -1.73
CNOT1-213ENST00000568158 BRK1Q8WUW1 75 aa4.23□□□□□ -1.73
CNOT1-213ENST00000568158 KRTAP5-5Q701N2 237 aaPredicted RBP4.17□□□□□ -1.74
CNOT1-213ENST00000568158 HMCN1Q96RW7 5635 aa4.12□□□□□ -1.75
CNOT1-213ENST00000568158 KRTAP9-6A8MVA2 160 aa4.03□□□□□ -1.76
CNOT1-213ENST00000568158 KRTAP12-4P60329 112 aa4.02□□□□□ -1.77
CNOT1-213ENST00000568158 KRTAP20-2Q3LI61 65 aa4.01□□□□□ -1.77
CNOT1-213ENST00000568158 SYNE1Q8NF91 8797 aaKnown RBP4□□□□□ -1.77
CNOT1-213ENST00000568158 SPRR5A0A1B0GTR4 108 aa3.99□□□□□ -1.77
CNOT1-213ENST00000568158 PMAIP1Q13794 54 aa3.99□□□□□ -1.77
CNOT1-213ENST00000568158 MT1AP04731 61 aa3.94□□□□□ -1.78
CNOT1-213ENST00000568158 KRTAP6-1Q3LI64 71 aa3.94□□□□□ -1.78
CNOT1-213ENST00000568158 AHNAK2Q8IVF2 5795 aa3.93□□□□□ -1.78
CNOT1-213ENST00000568158 GPR98Q8WXG9 6306 aa3.92□□□□□ -1.78
CNOT1-213ENST00000568158 KRTAP5-10Q6L8G5 202 aa3.86□□□□□ -1.79
CNOT1-213ENST00000568158 PRAC1Q96KF2 57 aa3.84□□□□□ -1.79
CNOT1-213ENST00000568158 OBSCNQ5VST9 7968 aa3.84□□□□□ -1.79
CNOT1-213ENST00000568158 KRTAP5-2Q701N4 177 aa3.81□□□□□ -1.8
CNOT1-213ENST00000568158 PRO0628Q9UI54 55 aa3.79□□□□□ -1.8
CNOT1-213ENST00000568158 KRTAP6-2Q3LI66 62 aa3.72□□□□□ -1.81
CNOT1-213ENST00000568158 KRTAP5-7Q6L8G8 165 aa3.68□□□□□ -1.82
CNOT1-213ENST00000568158 MT3P25713 68 aa3.6□□□□□ -1.83
CNOT1-213ENST00000568158 KTN1-AS1Q86SY8 53 aa3.58□□□□□ -1.84
CNOT1-213ENST00000568158 KRTAP5-8O75690 187 aa3.51□□□□□ -1.85
CNOT1-213ENST00000568158 SVIPQ8NHG7 77 aa3.43□□□□□ -1.86
CNOT1-213ENST00000568158 MUC5ACP98088 5654 aa3.21□□□□□ -1.9
CNOT1-213ENST00000568158 LCE1FQ5T754 118 aa3.2□□□□□ -1.9
CNOT1-213ENST00000568158 MUC5BQ9HC84 5762 aaPredicted RBP3.18□□□□□ -1.9
CNOT1-213ENST00000568158 LUZP6Q538Z0 58 aa3.16□□□□□ -1.9
CNOT1-213ENST00000568158 AHNAKQ09666 5890 aaKnown RBP3.13□□□□□ -1.91
CNOT1-213ENST00000568158 LCE1BQ5T7P3 118 aa3.09□□□□□ -1.91
CNOT1-213ENST00000568158 LCE3DQ9BYE3 92 aa3.09□□□□□ -1.91
CNOT1-213ENST00000568158 LCE1CQ5T751 118 aa3.02□□□□□ -1.93
CNOT1-213ENST00000568158 LCE3EQ5T5B0 92 aa2.94□□□□□ -1.94
CNOT1-213ENST00000568158 NDUFAF8A1L188 74 aa2.7□□□□□ -1.98
CNOT1-213ENST00000568158 KRTAP21-2Q3LI59 83 aa2.58□□□□□ -2
CNOT1-213ENST00000568158 MUC19Q7Z5P9 8384 aa2.49□□□□□ -2.01
CNOT1-213ENST00000568158 PHGR1C9JFL3 82 aa2.34□□□□□ -2.03
CNOT1-213ENST00000568158 PRM1P04553 51 aa2.31□□□□□ -2.04
CNOT1-213ENST00000568158 A0A0A0MQY5 61 aa2.16□□□□□ -2.06
CNOT1-213ENST00000568158 INE1O15225 51 aa2.15□□□□□ -2.07
CNOT1-213ENST00000568158 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
CNOT1-213ENST00000568158 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 6.4 ms