RNA–Protein interactions for RNA: ENST00000568006.1

GBP3-211, Transcript of guanylate binding protein 3, humanhuman

TSL 5

Gene GBP3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBP3-211ENST00000568006 SPRR5A0A1B0GTR4 108 aa3.28□□□□□ -1.88
GBP3-211ENST00000568006 CAMK2N1Q7Z7J9 78 aa3.28□□□□□ -1.88
GBP3-211ENST00000568006 MACF1Q9UPN3 7388 aaKnown RBP3.24□□□□□ -1.89
GBP3-211ENST00000568006 KRTAP10-5P60370 271 aa3.21□□□□□ -1.9
GBP3-211ENST00000568006 TNP1P09430 55 aa3.2□□□□□ -1.9
GBP3-211ENST00000568006 PRO2289Q9P1D8 64 aa3.2□□□□□ -1.9
GBP3-211ENST00000568006 INE1O15225 51 aa3.18□□□□□ -1.9
GBP3-211ENST00000568006 KRTAP2-2Q9BYT5 123 aa3.18□□□□□ -1.9
GBP3-211ENST00000568006 MT3P25713 68 aa3.17□□□□□ -1.9
GBP3-211ENST00000568006 SYNE2Q8WXH0 6885 aaKnown RBP3.16□□□□□ -1.9
GBP3-211ENST00000568006 KRTAP10-7P60409 375 aaPredicted RBP3.16□□□□□ -1.9
GBP3-211ENST00000568006 KRTAP6-3Q3LI67 103 aa3.16□□□□□ -1.9
GBP3-211ENST00000568006 MT1XP80297 61 aa3.11□□□□□ -1.91
GBP3-211ENST00000568006 KRTAP5-9P26371 169 aa3.07□□□□□ -1.92
GBP3-211ENST00000568006 LCE1EQ5T753 118 aa3.03□□□□□ -1.92
GBP3-211ENST00000568006 NEBP20929 6669 aa2.99□□□□□ -1.93
GBP3-211ENST00000568006 KRTAP5-11Q6L8G4 156 aa2.99□□□□□ -1.93
GBP3-211ENST00000568006 MUC12Q9UKN1 5478 aa2.98□□□□□ -1.93
GBP3-211ENST00000568006 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.98□□□□□ -1.93
GBP3-211ENST00000568006 KMT2DO14686 5537 aa2.96□□□□□ -1.94
GBP3-211ENST00000568006 KRTAP10-12P60413 245 aa2.96□□□□□ -1.94
GBP3-211ENST00000568006 KRTAP8-1Q8IUC2 63 aa2.93□□□□□ -1.94
GBP3-211ENST00000568006 SPRR2FQ96RM1 72 aa2.92□□□□□ -1.94
GBP3-211ENST00000568006 SPRR2EP22531 72 aa2.87□□□□□ -1.95
GBP3-211ENST00000568006 SPRR2BP35325 72 aa2.87□□□□□ -1.95
GBP3-211ENST00000568006 SPRR2AP35326 72 aa2.87□□□□□ -1.95
GBP3-211ENST00000568006 KRTAP20-1Q3LI63 56 aa2.86□□□□□ -1.95
GBP3-211ENST00000568006 LCE3AQ5TA76 89 aa2.86□□□□□ -1.95
GBP3-211ENST00000568006 MDN1Q9NU22 5596 aa2.85□□□□□ -1.95
GBP3-211ENST00000568006 KRTAP2-3P0C7H8 128 aa2.82□□□□□ -1.96
GBP3-211ENST00000568006 KRTAP2-4Q9BYR9 128 aa2.82□□□□□ -1.96
GBP3-211ENST00000568006 LCE1FQ5T754 118 aa2.8□□□□□ -1.96
GBP3-211ENST00000568006 KRTAP19-7Q3SYF9 63 aa2.79□□□□□ -1.96
GBP3-211ENST00000568006 KRTAP12-3P60328 96 aa2.78□□□□□ -1.96
GBP3-211ENST00000568006 SPRR2DP22532 72 aa2.77□□□□□ -1.97
GBP3-211ENST00000568006 MT1EP04732 61 aa2.75□□□□□ -1.97
GBP3-211ENST00000568006 KRTAP2-1Q9BYU5 128 aa2.74□□□□□ -1.97
GBP3-211ENST00000568006 KRTAP19-3Q7Z4W3 81 aa2.71□□□□□ -1.98
GBP3-211ENST00000568006 KRTAP19-5Q3LI72 72 aa2.7□□□□□ -1.98
GBP3-211ENST00000568006 MT1GP13640 62 aa2.65□□□□□ -1.99
GBP3-211ENST00000568006 KRTAP9-6A8MVA2 160 aa2.64□□□□□ -1.99
GBP3-211ENST00000568006 LCE3CQ5T5A8 94 aa2.64□□□□□ -1.99
GBP3-211ENST00000568006 MT1LQ93083 61 aa2.63□□□□□ -1.99
GBP3-211ENST00000568006 MT1MQ8N339 61 aa2.61□□□□□ -1.99
GBP3-211ENST00000568006 KRTAP5-1Q6L8H4 278 aa2.59□□□□□ -1.99
GBP3-211ENST00000568006 DSTQ03001 7570 aaKnown RBP2.57□□□□□ -2
GBP3-211ENST00000568006 KRTAP4-3Q9BYR4 195 aa2.53□□□□□ -2
GBP3-211ENST00000568006 KRTAP5-4Q6L8H1 288 aa2.49□□□□□ -2.01
GBP3-211ENST00000568006 KRTAP4-4Q9BYR3 166 aa2.46□□□□□ -2.02
GBP3-211ENST00000568006 KRTAP5-5Q701N2 237 aaPredicted RBP2.42□□□□□ -2.02
GBP3-211ENST00000568006 MT4P47944 62 aa2.41□□□□□ -2.02
GBP3-211ENST00000568006 LCE3EQ5T5B0 92 aa2.35□□□□□ -2.03
GBP3-211ENST00000568006 HMCN1Q96RW7 5635 aa2.32□□□□□ -2.04
GBP3-211ENST00000568006 KRTAP20-2Q3LI61 65 aa2.31□□□□□ -2.04
GBP3-211ENST00000568006 KRTAP5-10Q6L8G5 202 aa2.28□□□□□ -2.04
GBP3-211ENST00000568006 GPR98Q8WXG9 6306 aa2.28□□□□□ -2.04
GBP3-211ENST00000568006 SYNE1Q8NF91 8797 aaKnown RBP2.28□□□□□ -2.04
GBP3-211ENST00000568006 KRTAP12-4P60329 112 aa2.27□□□□□ -2.05
GBP3-211ENST00000568006 MT1AP04731 61 aa2.25□□□□□ -2.05
GBP3-211ENST00000568006 AHNAK2Q8IVF2 5795 aa2.24□□□□□ -2.05
GBP3-211ENST00000568006 OBSCNQ5VST9 7968 aa2.24□□□□□ -2.05
GBP3-211ENST00000568006 KRTAP6-1Q3LI64 71 aa2.22□□□□□ -2.05
GBP3-211ENST00000568006 KRTAP5-2Q701N4 177 aa2.2□□□□□ -2.06
GBP3-211ENST00000568006 KRTAP5-7Q6L8G8 165 aa2.18□□□□□ -2.06
GBP3-211ENST00000568006 KRTAP6-2Q3LI66 62 aa2.09□□□□□ -2.07
GBP3-211ENST00000568006 LCE3DQ9BYE3 92 aa2.07□□□□□ -2.08
GBP3-211ENST00000568006 KRTAP5-8O75690 187 aa2.04□□□□□ -2.08
GBP3-211ENST00000568006 PRM1P04553 51 aa2.02□□□□□ -2.09
GBP3-211ENST00000568006 LCE1CQ5T751 118 aa1.99□□□□□ -2.09
GBP3-211ENST00000568006 LCE1BQ5T7P3 118 aa1.99□□□□□ -2.09
GBP3-211ENST00000568006 MUC5ACP98088 5654 aa1.82□□□□□ -2.12
GBP3-211ENST00000568006 MUC5BQ9HC84 5762 aaPredicted RBP1.78□□□□□ -2.12
GBP3-211ENST00000568006 AHNAKQ09666 5890 aaKnown RBP1.78□□□□□ -2.13
GBP3-211ENST00000568006 MUC19Q7Z5P9 8384 aa1.61□□□□□ -2.15
GBP3-211ENST00000568006 KRTAP21-2Q3LI59 83 aa1.48□□□□□ -2.17
GBP3-211ENST00000568006 KRTAP21-1Q3LI58 79 aa1.38□□□□□ -2.19
GBP3-211ENST00000568006 PHGR1C9JFL3 82 aa1.36□□□□□ -2.19
GBP3-211ENST00000568006 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 50 ms