RNA–Protein interactions for RNA: ENST00000567988.5

FANCA-229, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 915 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-229ENST00000567988 KRTAP2-1Q9BYU5 128 aa4.55□□□□□ -1.68
FANCA-229ENST00000567988 KRTAP19-5Q3LI72 72 aa4.51□□□□□ -1.69
FANCA-229ENST00000567988 KRTAP19-3Q7Z4W3 81 aa4.51□□□□□ -1.69
FANCA-229ENST00000567988 UQCR11O14957 56 aa4.49□□□□□ -1.69
FANCA-229ENST00000567988 LCE3BQ5TA77 95 aa4.49□□□□□ -1.69
FANCA-229ENST00000567988 A0A0A0MQY5 61 aa4.47□□□□□ -1.69
FANCA-229ENST00000567988 LCE3AQ5TA76 89 aa4.46□□□□□ -1.7
FANCA-229ENST00000567988 TNP1P09430 55 aa4.44□□□□□ -1.7
FANCA-229ENST00000567988 MT1LQ93083 61 aa4.41□□□□□ -1.7
FANCA-229ENST00000567988 MT1GP13640 62 aa4.4□□□□□ -1.71
FANCA-229ENST00000567988 DSTQ03001 7570 aaKnown RBP4.4□□□□□ -1.71
FANCA-229ENST00000567988 MIR22HGQ0VDD5 57 aa4.39□□□□□ -1.71
FANCA-229ENST00000567988 MT1MQ8N339 61 aa4.36□□□□□ -1.71
FANCA-229ENST00000567988 PRAC1Q96KF2 57 aa4.34□□□□□ -1.71
FANCA-229ENST00000567988 PP632Q6XCG6 107 aa4.3□□□□□ -1.72
FANCA-229ENST00000567988 KRTAP25-1Q3LHN0 102 aa4.28□□□□□ -1.72
FANCA-229ENST00000567988 KRTAP12-3P60328 96 aa4.27□□□□□ -1.73
FANCA-229ENST00000567988 ROMO1P60602 79 aa4.27□□□□□ -1.73
FANCA-229ENST00000567988 KRTAP4-3Q9BYR4 195 aa4.24□□□□□ -1.73
FANCA-229ENST00000567988 K7ERS5 55 aa4.2□□□□□ -1.74
FANCA-229ENST00000567988 HMCN1Q96RW7 5635 aa4.2□□□□□ -1.74
FANCA-229ENST00000567988 KRTAP23-1A1A580 65 aa4.18□□□□□ -1.74
FANCA-229ENST00000567988 KRTAP4-7Q9BYR0 210 aa4.18□□□□□ -1.74
FANCA-229ENST00000567988 KRTAP5-4Q6L8H1 288 aa4.16□□□□□ -1.74
FANCA-229ENST00000567988 KRTAP4-9Q9BYQ8 210 aa4.15□□□□□ -1.75
FANCA-229ENST00000567988 LCE4AQ5TA78 99 aa4.12□□□□□ -1.75
FANCA-229ENST00000567988 LCE1DQ5T752 114 aa4.1□□□□□ -1.75
FANCA-229ENST00000567988 KRTAP19-4Q3LI73 84 aa4.07□□□□□ -1.76
FANCA-229ENST00000567988 KRTAP5-5Q701N2 237 aaPredicted RBP4.06□□□□□ -1.76
FANCA-229ENST00000567988 GPR98Q8WXG9 6306 aa4.04□□□□□ -1.76
FANCA-229ENST00000567988 LUZP6Q538Z0 58 aa4.03□□□□□ -1.76
FANCA-229ENST00000567988 KRTAP15-1Q3LI76 137 aa4.02□□□□□ -1.77
FANCA-229ENST00000567988 MT4P47944 62 aa4□□□□□ -1.77
FANCA-229ENST00000567988 KRTAP4-6Q9BYQ5 205 aa3.98□□□□□ -1.77
FANCA-229ENST00000567988 AHNAK2Q8IVF2 5795 aa3.97□□□□□ -1.77
FANCA-229ENST00000567988 LOC100996750A0A140TA64 210 aa3.95□□□□□ -1.78
FANCA-229ENST00000567988 LCE3CQ5T5A8 94 aa3.95□□□□□ -1.78
FANCA-229ENST00000567988 NDUFAF8A1L188 74 aa3.94□□□□□ -1.78
FANCA-229ENST00000567988 SYNE1Q8NF91 8797 aaKnown RBP3.87□□□□□ -1.79
FANCA-229ENST00000567988 SPRR5A0A1B0GTR4 108 aa3.86□□□□□ -1.79
FANCA-229ENST00000567988 KRTAP20-2Q3LI61 65 aa3.86□□□□□ -1.79
FANCA-229ENST00000567988 KRTAP9-6A8MVA2 160 aa3.81□□□□□ -1.8
FANCA-229ENST00000567988 KRTAP5-10Q6L8G5 202 aa3.81□□□□□ -1.8
FANCA-229ENST00000567988 KRTAP5-3Q6L8H2 238 aa3.79□□□□□ -1.8
FANCA-229ENST00000567988 KRTAP12-4P60329 112 aa3.78□□□□□ -1.8
FANCA-229ENST00000567988 MT1AP04731 61 aa3.74□□□□□ -1.81
FANCA-229ENST00000567988 KRTAP6-1Q3LI64 71 aa3.72□□□□□ -1.81
FANCA-229ENST00000567988 KRTAP5-2Q701N4 177 aa3.67□□□□□ -1.82
FANCA-229ENST00000567988 KRTAP5-7Q6L8G8 165 aa3.63□□□□□ -1.83
FANCA-229ENST00000567988 KRTAP9-4Q9BYQ2 154 aa3.6□□□□□ -1.83
FANCA-229ENST00000567988 KRTAP6-2Q3LI66 62 aa3.51□□□□□ -1.85
FANCA-229ENST00000567988 KRTAP4-11Q9BYQ6 195 aa3.49□□□□□ -1.85
FANCA-229ENST00000567988 INE1O15225 51 aa3.42□□□□□ -1.86
FANCA-229ENST00000567988 KRTAP5-8O75690 187 aa3.4□□□□□ -1.87
FANCA-229ENST00000567988 MT3P25713 68 aa3.38□□□□□ -1.87
FANCA-229ENST00000567988 OBSCNQ5VST9 7968 aa3.34□□□□□ -1.87
FANCA-229ENST00000567988 MUC5ACP98088 5654 aa3.32□□□□□ -1.88
FANCA-229ENST00000567988 MUC5BQ9HC84 5762 aaPredicted RBP3.31□□□□□ -1.88
FANCA-229ENST00000567988 KRTAP5-1Q6L8H4 278 aa3.26□□□□□ -1.89
FANCA-229ENST00000567988 AHNAKQ09666 5890 aaKnown RBP3.25□□□□□ -1.89
FANCA-229ENST00000567988 LCE1EQ5T753 118 aa3.14□□□□□ -1.91
FANCA-229ENST00000567988 KRTAP4-12Q9BQ66 201 aa3.14□□□□□ -1.91
FANCA-229ENST00000567988 KRTAP9-9Q9BYP9 154 aa3.11□□□□□ -1.91
FANCA-229ENST00000567988 KRTAP4-2Q9BYR5 136 aa2.98□□□□□ -1.93
FANCA-229ENST00000567988 LCE1CQ5T751 118 aa2.91□□□□□ -1.94
FANCA-229ENST00000567988 LCE1BQ5T7P3 118 aa2.91□□□□□ -1.94
FANCA-229ENST00000567988 LCE3DQ9BYE3 92 aa2.84□□□□□ -1.95
FANCA-229ENST00000567988 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.71□□□□□ -1.98
FANCA-229ENST00000567988 LCE3EQ5T5B0 92 aa2.69□□□□□ -1.98
FANCA-229ENST00000567988 KRTAP5-11Q6L8G4 156 aa2.64□□□□□ -1.99
FANCA-229ENST00000567988 LCE1FQ5T754 118 aa2.52□□□□□ -2.01
FANCA-229ENST00000567988 KRTAP21-2Q3LI59 83 aa2.49□□□□□ -2.01
FANCA-229ENST00000567988 PHGR1C9JFL3 82 aa2.27□□□□□ -2.05
FANCA-229ENST00000567988 KRTAP4-4Q9BYR3 166 aa2.17□□□□□ -2.06
FANCA-229ENST00000567988 PRM1P04553 51 aa2.07□□□□□ -2.08
FANCA-229ENST00000567988 MUC19Q7Z5P9 8384 aa2.06□□□□□ -2.08
FANCA-229ENST00000567988 KRTAP21-1Q3LI58 79 aa1.64□□□□□ -2.15
FANCA-229ENST00000567988 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 88 ms