RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 LELP1Q5T871 98 aa1.29□□□□□ -2.2
HERPUD1-212ENST00000567944 MT1HL1P0DM35 61 aa1.28□□□□□ -2.2
HERPUD1-212ENST00000567944 FCGBPQ9Y6R7 5405 aaPredicted RBP1.28□□□□□ -2.21
HERPUD1-212ENST00000567944 SPINK1P00995 79 aa1.27□□□□□ -2.21
HERPUD1-212ENST00000567944 DEFB1P60022 68 aa1.27□□□□□ -2.21
HERPUD1-212ENST00000567944 MUC2Q02817 5179 aa1.26□□□□□ -2.21
HERPUD1-212ENST00000567944 DEFB4AO15263 64 aa1.26□□□□□ -2.21
HERPUD1-212ENST00000567944 LPAP08519 4548 aa1.25□□□□□ -2.21
HERPUD1-212ENST00000567944 S4R3F8 94 aa1.25□□□□□ -2.21
HERPUD1-212ENST00000567944 SMR3BP02814 79 aaPredicted RBP1.24□□□□□ -2.21
HERPUD1-212ENST00000567944 C10orf95Q9H7T3 257 aa1.24□□□□□ -2.21
HERPUD1-212ENST00000567944 H3BNG1 76 aa1.23□□□□□ -2.21
HERPUD1-212ENST00000567944 M0QZ58 72 aa1.23□□□□□ -2.21
HERPUD1-212ENST00000567944 SPART-AS1P0CW21 52 aa1.23□□□□□ -2.21
HERPUD1-212ENST00000567944 FSIP2Q5CZC0 6907 aa1.22□□□□□ -2.21
HERPUD1-212ENST00000567944 A0A0D9SG42 100 aa1.2□□□□□ -2.22
HERPUD1-212ENST00000567944 LINC01556Q5JQF7 62 aa1.2□□□□□ -2.22
HERPUD1-212ENST00000567944 MUC17Q685J3 4493 aa1.19□□□□□ -2.22
HERPUD1-212ENST00000567944 A0A096LPF7 62 aa1.19□□□□□ -2.22
HERPUD1-212ENST00000567944 SPINK6Q6UWN8 80 aa1.18□□□□□ -2.22
HERPUD1-212ENST00000567944 A0A096LNI7 61 aa1.17□□□□□ -2.22
HERPUD1-212ENST00000567944 HTN3P15516 51 aa1.17□□□□□ -2.22
HERPUD1-212ENST00000567944 RPS29P62273 56 aaKnown RBP1.12□□□□□ -2.23
HERPUD1-212ENST00000567944 KRTAP19-2Q3LHN2 52 aa1.12□□□□□ -2.23
HERPUD1-212ENST00000567944 FLGP20930 4061 aaPredicted RBP1.12□□□□□ -2.23
HERPUD1-212ENST00000567944 SSPOA2VEC9 5147 aa1.11□□□□□ -2.23
HERPUD1-212ENST00000567944 TNP1P09430 55 aa1.11□□□□□ -2.23
HERPUD1-212ENST00000567944 USH2AO75445 5202 aa1.11□□□□□ -2.23
HERPUD1-212ENST00000567944 C9orf92A6NGG3 77 aa1.09□□□□□ -2.23
HERPUD1-212ENST00000567944 MT1HP80294 61 aa1.08□□□□□ -2.24
HERPUD1-212ENST00000567944 SYNE2Q8WXH0 6885 aaKnown RBP1.07□□□□□ -2.24
HERPUD1-212ENST00000567944 NEBP20929 6669 aa1.06□□□□□ -2.24
HERPUD1-212ENST00000567944 MACF1Q9UPN3 7388 aaKnown RBP1.06□□□□□ -2.24
HERPUD1-212ENST00000567944 KRTAP19-6Q3LI70 58 aa1.02□□□□□ -2.25
HERPUD1-212ENST00000567944 KRTAP20-1Q3LI63 56 aa1.01□□□□□ -2.25
HERPUD1-212ENST00000567944 MUC12Q9UKN1 5478 aa1.01□□□□□ -2.25
HERPUD1-212ENST00000567944 M0R2T5 61 aa0.99□□□□□ -2.25
HERPUD1-212ENST00000567944 KMT2DO14686 5537 aa0.97□□□□□ -2.25
HERPUD1-212ENST00000567944 MT2AP02795 61 aa0.97□□□□□ -2.25
HERPUD1-212ENST00000567944 MT1FP04733 61 aa0.97□□□□□ -2.25
HERPUD1-212ENST00000567944 KRTAP2-3P0C7H8 128 aa0.96□□□□□ -2.26
HERPUD1-212ENST00000567944 KRTAP2-4Q9BYR9 128 aa0.96□□□□□ -2.26
HERPUD1-212ENST00000567944 MDN1Q9NU22 5596 aa0.96□□□□□ -2.26
HERPUD1-212ENST00000567944 GPR98Q8WXG9 6306 aa0.93□□□□□ -2.26
HERPUD1-212ENST00000567944 KRTAP2-1Q9BYU5 128 aa0.92□□□□□ -2.26
HERPUD1-212ENST00000567944 KRTAP8-1Q8IUC2 63 aa0.89□□□□□ -2.27
HERPUD1-212ENST00000567944 MT1BP07438 61 aa0.86□□□□□ -2.27
HERPUD1-212ENST00000567944 SPRR2EP22531 72 aa0.85□□□□□ -2.27
HERPUD1-212ENST00000567944 SPRR2BP35325 72 aa0.85□□□□□ -2.27
HERPUD1-212ENST00000567944 SPRR2AP35326 72 aa0.85□□□□□ -2.27
HERPUD1-212ENST00000567944 KRTAP19-8Q3LI54 63 aa0.85□□□□□ -2.27
HERPUD1-212ENST00000567944 KRTAP5-10Q6L8G5 202 aa0.85□□□□□ -2.27
HERPUD1-212ENST00000567944 SPRR2FQ96RM1 72 aa0.83□□□□□ -2.28
HERPUD1-212ENST00000567944 SPRR2GQ9BYE4 73 aa0.83□□□□□ -2.28
HERPUD1-212ENST00000567944 AHNAK2Q8IVF2 5795 aa0.82□□□□□ -2.28
HERPUD1-212ENST00000567944 SPRR2DP22532 72 aa0.82□□□□□ -2.28
HERPUD1-212ENST00000567944 DSTQ03001 7570 aaKnown RBP0.81□□□□□ -2.28
HERPUD1-212ENST00000567944 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.28
HERPUD1-212ENST00000567944 MT1XP80297 61 aa0.77□□□□□ -2.29
HERPUD1-212ENST00000567944 PRM1P04553 51 aa0.74□□□□□ -2.29
HERPUD1-212ENST00000567944 MT1AP04731 61 aa0.74□□□□□ -2.29
HERPUD1-212ENST00000567944 MT4P47944 62 aa0.72□□□□□ -2.29
HERPUD1-212ENST00000567944 AHNAKQ09666 5890 aaKnown RBP0.72□□□□□ -2.29
HERPUD1-212ENST00000567944 KRTAP19-5Q3LI72 72 aa0.71□□□□□ -2.3
HERPUD1-212ENST00000567944 KRTAP19-3Q7Z4W3 81 aa0.71□□□□□ -2.3
HERPUD1-212ENST00000567944 MUC5ACP98088 5654 aa0.7□□□□□ -2.3
HERPUD1-212ENST00000567944 KRTAP19-7Q3SYF9 63 aa0.7□□□□□ -2.3
HERPUD1-212ENST00000567944 MUC5BQ9HC84 5762 aaPredicted RBP0.69□□□□□ -2.3
HERPUD1-212ENST00000567944 MT1EP04732 61 aa0.69□□□□□ -2.3
HERPUD1-212ENST00000567944 KRTAP20-2Q3LI61 65 aa0.69□□□□□ -2.3
HERPUD1-212ENST00000567944 MT1GP13640 62 aa0.67□□□□□ -2.3
HERPUD1-212ENST00000567944 MT1MQ8N339 61 aa0.66□□□□□ -2.3
HERPUD1-212ENST00000567944 MT1LQ93083 61 aa0.65□□□□□ -2.31
HERPUD1-212ENST00000567944 SYNE1Q8NF91 8797 aaKnown RBP0.61□□□□□ -2.31
HERPUD1-212ENST00000567944 KRTAP6-2Q3LI66 62 aa0.61□□□□□ -2.31
HERPUD1-212ENST00000567944 KRTAP21-1Q3LI58 79 aa0.53□□□□□ -2.32
HERPUD1-212ENST00000567944 KRTAP6-1Q3LI64 71 aa0.53□□□□□ -2.32
HERPUD1-212ENST00000567944 PHGR1C9JFL3 82 aa0.45□□□□□ -2.34
Retrieved 78 of 20,778 RNA–protein pairs in 8 ms