RNA–Protein interactions for RNA: ENST00000567880.5

TCF4-236, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-236ENST00000567880 TNP1P09430 55 aa4.21□□□□□ -1.74
TCF4-236ENST00000567880 CRCT1Q9UGL9 99 aa4.2□□□□□ -1.74
TCF4-236ENST00000567880 KRTAP10-7P60409 375 aaPredicted RBP4.18□□□□□ -1.74
TCF4-236ENST00000567880 FCGBPQ9Y6R7 5405 aaPredicted RBP4.18□□□□□ -1.74
TCF4-236ENST00000567880 LCE1AQ5T7P2 110 aa4.17□□□□□ -1.74
TCF4-236ENST00000567880 LCE1FQ5T754 118 aa4.15□□□□□ -1.75
TCF4-236ENST00000567880 KRTAP2-2Q9BYT5 123 aa4.12□□□□□ -1.75
TCF4-236ENST00000567880 KRTAP10-12P60413 245 aa4.1□□□□□ -1.75
TCF4-236ENST00000567880 KMT2DO14686 5537 aa4.09□□□□□ -1.75
TCF4-236ENST00000567880 SPRR5A0A1B0GTR4 108 aa4.07□□□□□ -1.76
TCF4-236ENST00000567880 LCE3AQ5TA76 89 aa4.06□□□□□ -1.76
TCF4-236ENST00000567880 INE1O15225 51 aa4.05□□□□□ -1.76
TCF4-236ENST00000567880 MACF1Q9UPN3 7388 aaKnown RBP4.04□□□□□ -1.76
TCF4-236ENST00000567880 MT3P25713 68 aa4.02□□□□□ -1.77
TCF4-236ENST00000567880 KRTAP8-1Q8IUC2 63 aa3.95□□□□□ -1.78
TCF4-236ENST00000567880 SYNE2Q8WXH0 6885 aaKnown RBP3.95□□□□□ -1.78
TCF4-236ENST00000567880 KRTAP19-5Q3LI72 72 aa3.91□□□□□ -1.78
TCF4-236ENST00000567880 KRTAP12-3P60328 96 aa3.89□□□□□ -1.79
TCF4-236ENST00000567880 KRTAP19-7Q3SYF9 63 aa3.87□□□□□ -1.79
TCF4-236ENST00000567880 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.87□□□□□ -1.79
TCF4-236ENST00000567880 SPRR2FQ96RM1 72 aa3.83□□□□□ -1.8
TCF4-236ENST00000567880 LCE3CQ5T5A8 94 aa3.81□□□□□ -1.8
TCF4-236ENST00000567880 MT1EP04732 61 aa3.8□□□□□ -1.8
TCF4-236ENST00000567880 MUC12Q9UKN1 5478 aa3.8□□□□□ -1.8
TCF4-236ENST00000567880 KRTAP5-9P26371 169 aa3.77□□□□□ -1.81
TCF4-236ENST00000567880 KRTAP6-3Q3LI67 103 aa3.74□□□□□ -1.81
TCF4-236ENST00000567880 MT1LQ93083 61 aa3.72□□□□□ -1.81
TCF4-236ENST00000567880 MDN1Q9NU22 5596 aa3.69□□□□□ -1.82
TCF4-236ENST00000567880 KRTAP19-3Q7Z4W3 81 aa3.68□□□□□ -1.82
TCF4-236ENST00000567880 SPRR2EP22531 72 aa3.66□□□□□ -1.82
TCF4-236ENST00000567880 SPRR2BP35325 72 aa3.66□□□□□ -1.82
TCF4-236ENST00000567880 SPRR2AP35326 72 aa3.66□□□□□ -1.82
TCF4-236ENST00000567880 MT1GP13640 62 aa3.63□□□□□ -1.83
TCF4-236ENST00000567880 MT1MQ8N339 61 aa3.59□□□□□ -1.83
TCF4-236ENST00000567880 DSTQ03001 7570 aaKnown RBP3.57□□□□□ -1.84
TCF4-236ENST00000567880 KRTAP4-3Q9BYR4 195 aa3.56□□□□□ -1.84
TCF4-236ENST00000567880 NEBP20929 6669 aa3.54□□□□□ -1.84
TCF4-236ENST00000567880 SPRR2DP22532 72 aa3.52□□□□□ -1.85
TCF4-236ENST00000567880 LCE3EQ5T5B0 92 aa3.52□□□□□ -1.85
TCF4-236ENST00000567880 LCE1EQ5T753 118 aa3.52□□□□□ -1.85
TCF4-236ENST00000567880 KRTAP9-6A8MVA2 160 aa3.43□□□□□ -1.86
TCF4-236ENST00000567880 KRTAP5-4Q6L8H1 288 aa3.34□□□□□ -1.87
TCF4-236ENST00000567880 KRTAP2-3P0C7H8 128 aa3.3□□□□□ -1.88
TCF4-236ENST00000567880 KRTAP2-4Q9BYR9 128 aa3.3□□□□□ -1.88
TCF4-236ENST00000567880 HMCN1Q96RW7 5635 aa3.3□□□□□ -1.88
TCF4-236ENST00000567880 KRTAP20-1Q3LI63 56 aa3.28□□□□□ -1.88
TCF4-236ENST00000567880 KRTAP2-1Q9BYU5 128 aa3.27□□□□□ -1.89
TCF4-236ENST00000567880 KRTAP5-5Q701N2 237 aaPredicted RBP3.23□□□□□ -1.89
TCF4-236ENST00000567880 LCE3DQ9BYE3 92 aa3.22□□□□□ -1.89
TCF4-236ENST00000567880 MT1AP04731 61 aa3.15□□□□□ -1.9
TCF4-236ENST00000567880 KRTAP6-1Q3LI64 71 aa3.15□□□□□ -1.91
TCF4-236ENST00000567880 KRTAP4-4Q9BYR3 166 aa3.13□□□□□ -1.91
TCF4-236ENST00000567880 SYNE1Q8NF91 8797 aaKnown RBP3.12□□□□□ -1.91
TCF4-236ENST00000567880 KRTAP12-4P60329 112 aa3.11□□□□□ -1.91
TCF4-236ENST00000567880 KRTAP5-1Q6L8H4 278 aa3.11□□□□□ -1.91
TCF4-236ENST00000567880 MT4P47944 62 aa3.08□□□□□ -1.92
TCF4-236ENST00000567880 KRTAP5-2Q701N4 177 aa3.01□□□□□ -1.93
TCF4-236ENST00000567880 KRTAP20-2Q3LI61 65 aa2.94□□□□□ -1.94
TCF4-236ENST00000567880 KRTAP5-11Q6L8G4 156 aa2.94□□□□□ -1.94
TCF4-236ENST00000567880 KRTAP6-2Q3LI66 62 aa2.91□□□□□ -1.94
TCF4-236ENST00000567880 KRTAP5-8O75690 187 aa2.87□□□□□ -1.95
TCF4-236ENST00000567880 OBSCNQ5VST9 7968 aa2.82□□□□□ -1.96
TCF4-236ENST00000567880 GPR98Q8WXG9 6306 aa2.69□□□□□ -1.98
TCF4-236ENST00000567880 AHNAK2Q8IVF2 5795 aa2.67□□□□□ -1.98
TCF4-236ENST00000567880 PRM1P04553 51 aa2.58□□□□□ -2
TCF4-236ENST00000567880 KRTAP5-10Q6L8G5 202 aa2.53□□□□□ -2
TCF4-236ENST00000567880 LCE1BQ5T7P3 118 aa2.39□□□□□ -2.03
TCF4-236ENST00000567880 KRTAP5-7Q6L8G8 165 aa2.38□□□□□ -2.03
TCF4-236ENST00000567880 MUC5ACP98088 5654 aa2.36□□□□□ -2.03
TCF4-236ENST00000567880 LCE1CQ5T751 118 aa2.32□□□□□ -2.04
TCF4-236ENST00000567880 MUC5BQ9HC84 5762 aaPredicted RBP2.15□□□□□ -2.06
TCF4-236ENST00000567880 KRTAP21-2Q3LI59 83 aa2.05□□□□□ -2.08
TCF4-236ENST00000567880 AHNAKQ09666 5890 aaKnown RBP2.04□□□□□ -2.08
TCF4-236ENST00000567880 MUC19Q7Z5P9 8384 aa1.84□□□□□ -2.12
TCF4-236ENST00000567880 PHGR1C9JFL3 82 aa1.78□□□□□ -2.13
TCF4-236ENST00000567880 KRTAP21-1Q3LI58 79 aa1.71□□□□□ -2.14
TCF4-236ENST00000567880 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 153.9 ms