RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, human

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMG1-213	ENST00000567737	COX7C	P15954	63 aa		4.83	□□□□□ -1.64
SMG1-213	ENST00000567737	KRTAP19-5	Q3LI72	72 aa		4.83	□□□□□ -1.64
SMG1-213	ENST00000567737	UQCRQ	O14949	82 aa		4.82	□□□□□ -1.64
SMG1-213	ENST00000567737	CCDC179	H3BU77	68 aa		4.8	□□□□□ -1.64
SMG1-213	ENST00000567737	MT1L	Q93083	61 aa		4.78	□□□□□ -1.64
SMG1-213	ENST00000567737	CAMK2N1	Q7Z7J9	78 aa		4.76	□□□□□ -1.65
SMG1-213	ENST00000567737	AHNAK	Q09666	5890 aa	Known RBP	4.74	□□□□□ -1.65
SMG1-213	ENST00000567737		H0Y9P7	68 aa		4.72	□□□□□ -1.65
SMG1-213	ENST00000567737	MP68	P56378	58 aa		4.72	□□□□□ -1.65
SMG1-213	ENST00000567737		A0A0D9SG42	100 aa		4.71	□□□□□ -1.66
SMG1-213	ENST00000567737	SNURF	Q9Y675	71 aa		4.71	□□□□□ -1.66
SMG1-213	ENST00000567737		H3BPC8	53 aa		4.7	□□□□□ -1.66
SMG1-213	ENST00000567737	KRTAP12-4	P60329	112 aa		4.7	□□□□□ -1.66
SMG1-213	ENST00000567737	MUC5AC	P98088	5654 aa		4.69	□□□□□ -1.66
SMG1-213	ENST00000567737	KRTAP9-6	A8MVA2	160 aa		4.69	□□□□□ -1.66
SMG1-213	ENST00000567737	LINC00208	Q96KT6	92 aa		4.68	□□□□□ -1.66
SMG1-213	ENST00000567737		H7BZZ5	65 aa		4.65	□□□□□ -1.67
SMG1-213	ENST00000567737	TMEM258	P61165	79 aa		4.64	□□□□□ -1.67
SMG1-213	ENST00000567737		A8MU10	97 aa		4.63	□□□□□ -1.67
SMG1-213	ENST00000567737	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.63	□□□□□ -1.67
SMG1-213	ENST00000567737	ATP5E	P56381	51 aa	Predicted RBP	4.59	□□□□□ -1.67
SMG1-213	ENST00000567737	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.58	□□□□□ -1.68
SMG1-213	ENST00000567737	KRTAP5-8	O75690	187 aa		4.56	□□□□□ -1.68
SMG1-213	ENST00000567737	SPANXA2-OT1	Q8N9U9	137 aa		4.56	□□□□□ -1.68
SMG1-213	ENST00000567737	DMAC1	Q96GE9	116 aa		4.53	□□□□□ -1.68
SMG1-213	ENST00000567737	SERP1	Q9Y6X1	66 aa		4.5	□□□□□ -1.69
SMG1-213	ENST00000567737	SYNE1	Q8NF91	8797 aa	Known RBP	4.5	□□□□□ -1.69
SMG1-213	ENST00000567737	RPS28	P62857	69 aa	Known RBP	4.49	□□□□□ -1.69
SMG1-213	ENST00000567737	LCE3E	Q5T5B0	92 aa		4.46	□□□□□ -1.7
SMG1-213	ENST00000567737	C10orf95	Q9H7T3	257 aa		4.46	□□□□□ -1.7
SMG1-213	ENST00000567737	ACYP2	P14621	99 aa		4.43	□□□□□ -1.7
SMG1-213	ENST00000567737	KRTAP13-4	Q3LI77	160 aa		4.43	□□□□□ -1.7
SMG1-213	ENST00000567737	COA5	Q86WW8	74 aa		4.42	□□□□□ -1.7
SMG1-213	ENST00000567737	SPTSSB	Q8NFR3	76 aa		4.42	□□□□□ -1.7
SMG1-213	ENST00000567737	SMIM26	A0A096LP01	95 aa		4.38	□□□□□ -1.71
SMG1-213	ENST00000567737	CHKB-CPT1B	H3BT56	60 aa		4.37	□□□□□ -1.71
SMG1-213	ENST00000567737	LCE3A	Q5TA76	89 aa		4.37	□□□□□ -1.71
SMG1-213	ENST00000567737	KRTAP5-2	Q701N4	177 aa		4.36	□□□□□ -1.71
SMG1-213	ENST00000567737		Q1T7F1	81 aa		4.29	□□□□□ -1.72
SMG1-213	ENST00000567737	KRTAP5-1	Q6L8H4	278 aa		4.29	□□□□□ -1.72
SMG1-213	ENST00000567737		V9GYY9	64 aa		4.29	□□□□□ -1.72
SMG1-213	ENST00000567737	SPINT4	Q6UDR6	99 aa		4.28	□□□□□ -1.72
SMG1-213	ENST00000567737	LINC01558	Q9Y6Z2	57 aa		4.25	□□□□□ -1.73
SMG1-213	ENST00000567737	OBSCN	Q5VST9	7968 aa		4.25	□□□□□ -1.73
SMG1-213	ENST00000567737	PRR15L	Q9BU68	103 aa		4.21	□□□□□ -1.74
SMG1-213	ENST00000567737	PSPHP1	O15172	72 aa		4.2	□□□□□ -1.74
SMG1-213	ENST00000567737	KRTAP12-3	P60328	96 aa		4.2	□□□□□ -1.74
SMG1-213	ENST00000567737		A0A1B0GU69	56 aa		4.18	□□□□□ -1.74
SMG1-213	ENST00000567737	TNP1	P09430	55 aa		4.17	□□□□□ -1.74
SMG1-213	ENST00000567737	KRTAP4-4	Q9BYR3	166 aa		4.17	□□□□□ -1.74
SMG1-213	ENST00000567737	KRTAP12-1	P59990	96 aa		4.13	□□□□□ -1.75
SMG1-213	ENST00000567737		A6NED7	52 aa		4.09	□□□□□ -1.75
SMG1-213	ENST00000567737	KRTAP6-1	Q3LI64	71 aa		4.09	□□□□□ -1.75
SMG1-213	ENST00000567737	SPATA8	Q6RVD6	105 aa		4.09	□□□□□ -1.75
SMG1-213	ENST00000567737	PRO0628	Q9UI54	55 aa		4.09	□□□□□ -1.75
SMG1-213	ENST00000567737	UQCR11	O14957	56 aa		4.06	□□□□□ -1.76
SMG1-213	ENST00000567737	MT1A	P04731	61 aa		4.06	□□□□□ -1.76
SMG1-213	ENST00000567737		A0A1B0GU33	70 aa		4.05	□□□□□ -1.76
SMG1-213	ENST00000567737	KRTAP6-2	Q3LI66	62 aa		4.05	□□□□□ -1.76
SMG1-213	ENST00000567737	BRK1	Q8WUW1	75 aa		4.04	□□□□□ -1.76
SMG1-213	ENST00000567737	CDC42SE1	Q9NRR8	79 aa		4.02	□□□□□ -1.77
SMG1-213	ENST00000567737	MIR22HG	Q0VDD5	57 aa		4.01	□□□□□ -1.77
SMG1-213	ENST00000567737	PMAIP1	Q13794	54 aa		3.91	□□□□□ -1.78
SMG1-213	ENST00000567737	LUZP6	Q538Z0	58 aa		3.89	□□□□□ -1.79
SMG1-213	ENST00000567737		K7ERS5	55 aa		3.85	□□□□□ -1.79
SMG1-213	ENST00000567737	KRTAP25-1	Q3LHN0	102 aa		3.83	□□□□□ -1.8
SMG1-213	ENST00000567737	LCE3D	Q9BYE3	92 aa		3.73	□□□□□ -1.81
SMG1-213	ENST00000567737	KTN1-AS1	Q86SY8	53 aa		3.69	□□□□□ -1.82
SMG1-213	ENST00000567737	ROMO1	P60602	79 aa		3.68	□□□□□ -1.82
SMG1-213	ENST00000567737	LCE1B	Q5T7P3	118 aa		3.5	□□□□□ -1.85
SMG1-213	ENST00000567737	LCE1C	Q5T751	118 aa		3.46	□□□□□ -1.86
SMG1-213	ENST00000567737	PHGR1	C9JFL3	82 aa		3.29	□□□□□ -1.88
SMG1-213	ENST00000567737	KRTAP21-2	Q3LI59	83 aa		2.69	□□□□□ -1.98
SMG1-213	ENST00000567737	MUC19	Q7Z5P9	8384 aa		2.68	□□□□□ -1.98
SMG1-213	ENST00000567737	INE1	O15225	51 aa		2.58	□□□□□ -2
SMG1-213	ENST00000567737	KRTAP21-1	Q3LI58	79 aa		2.51	□□□□□ -2.01
SMG1-213	ENST00000567737	PRM1	P04553	51 aa		1.91	□□□□□ -2.1
SMG1-213	ENST00000567737	MUC16	Q8WXI7	14507 aa		1.88	□□□□□ -2.11

Retrieved 78 of 20,778 RNA–protein pairs in 108.4 ms