RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 LCE4AQ5TA78 99 aa7.26□□□□□ -1.25
LINC01238-205ENST00000567549 KRTAP12-1P59990 96 aa7.25□□□□□ -1.25
LINC01238-205ENST00000567549 SPINT4Q6UDR6 99 aa7.24□□□□□ -1.25
LINC01238-205ENST00000567549 CAMK2N1Q7Z7J9 78 aa7.24□□□□□ -1.25
LINC01238-205ENST00000567549 KRTAP9-9Q9BYP9 154 aa7.23□□□□□ -1.25
LINC01238-205ENST00000567549 KRTAP9-4Q9BYQ2 154 aa7.23□□□□□ -1.25
LINC01238-205ENST00000567549 ROMO1P60602 79 aa7.01□□□□□ -1.29
LINC01238-205ENST00000567549 LCE5AQ5TCM9 118 aa6.98□□□□□ -1.29
LINC01238-205ENST00000567549 LCE1DQ5T752 114 aa6.97□□□□□ -1.29
LINC01238-205ENST00000567549 KRTAP19-3Q7Z4W3 81 aa6.96□□□□□ -1.3
LINC01238-205ENST00000567549 KTN1-AS1Q86SY8 53 aa6.95□□□□□ -1.3
LINC01238-205ENST00000567549 SVIPQ8NHG7 77 aa6.95□□□□□ -1.3
LINC01238-205ENST00000567549 KRTAP19-7Q3SYF9 63 aa6.93□□□□□ -1.3
LINC01238-205ENST00000567549 MT1EP04732 61 aa6.92□□□□□ -1.3
LINC01238-205ENST00000567549 DSTQ03001 7570 aaKnown RBP6.9□□□□□ -1.3
LINC01238-205ENST00000567549 PP632Q6XCG6 107 aa6.86□□□□□ -1.31
LINC01238-205ENST00000567549 C10orf95Q9H7T3 257 aa6.85□□□□□ -1.31
LINC01238-205ENST00000567549 MT1GP13640 62 aa6.82□□□□□ -1.32
LINC01238-205ENST00000567549 GPR98Q8WXG9 6306 aa6.81□□□□□ -1.32
LINC01238-205ENST00000567549 KRTAP4-9Q9BYQ8 210 aa6.78□□□□□ -1.32
LINC01238-205ENST00000567549 KRTAP25-1Q3LHN0 102 aa6.76□□□□□ -1.33
LINC01238-205ENST00000567549 KRTAP4-7Q9BYR0 210 aa6.74□□□□□ -1.33
LINC01238-205ENST00000567549 KRTAP19-5Q3LI72 72 aa6.73□□□□□ -1.33
LINC01238-205ENST00000567549 TNP1P09430 55 aa6.72□□□□□ -1.33
LINC01238-205ENST00000567549 PRAC1Q96KF2 57 aa6.71□□□□□ -1.34
LINC01238-205ENST00000567549 KRTAP15-1Q3LI76 137 aa6.61□□□□□ -1.35
LINC01238-205ENST00000567549 MT1MQ8N339 61 aa6.61□□□□□ -1.35
LINC01238-205ENST00000567549 MT1LQ93083 61 aa6.58□□□□□ -1.36
LINC01238-205ENST00000567549 MT4P47944 62 aa6.55□□□□□ -1.36
LINC01238-205ENST00000567549 KRTAP4-11Q9BYQ6 195 aa6.54□□□□□ -1.36
LINC01238-205ENST00000567549 HMCN1Q96RW7 5635 aa6.51□□□□□ -1.37
LINC01238-205ENST00000567549 LCE3AQ5TA76 89 aa6.49□□□□□ -1.37
LINC01238-205ENST00000567549 KRTAP5-4Q6L8H1 288 aa6.43□□□□□ -1.38
LINC01238-205ENST00000567549 KRTAP4-2Q9BYR5 136 aa6.43□□□□□ -1.38
LINC01238-205ENST00000567549 KRTAP4-3Q9BYR4 195 aa6.35□□□□□ -1.39
LINC01238-205ENST00000567549 AHNAK2Q8IVF2 5795 aa6.34□□□□□ -1.39
LINC01238-205ENST00000567549 KRTAP12-3P60328 96 aa6.31□□□□□ -1.4
LINC01238-205ENST00000567549 KRTAP5-10Q6L8G5 202 aa6.26□□□□□ -1.41
LINC01238-205ENST00000567549 A0A0A0MQY5 61 aa6.12□□□□□ -1.43
LINC01238-205ENST00000567549 SPRR5A0A1B0GTR4 108 aa6.12□□□□□ -1.43
LINC01238-205ENST00000567549 KRTAP12-4P60329 112 aa6.11□□□□□ -1.43
LINC01238-205ENST00000567549 KRTAP5-7Q6L8G8 165 aa6.1□□□□□ -1.43
LINC01238-205ENST00000567549 KRTAP20-2Q3LI61 65 aa6.09□□□□□ -1.43
LINC01238-205ENST00000567549 KRTAP5-3Q6L8H2 238 aa6.09□□□□□ -1.43
LINC01238-205ENST00000567549 KRTAP5-5Q701N2 237 aaPredicted RBP6.05□□□□□ -1.44
LINC01238-205ENST00000567549 SYNE1Q8NF91 8797 aaKnown RBP5.79□□□□□ -1.48
LINC01238-205ENST00000567549 LCE3CQ5T5A8 94 aa5.78□□□□□ -1.48
LINC01238-205ENST00000567549 MT1AP04731 61 aa5.64□□□□□ -1.51
LINC01238-205ENST00000567549 LUZP6Q538Z0 58 aa5.61□□□□□ -1.51
LINC01238-205ENST00000567549 KRTAP5-2Q701N4 177 aa5.58□□□□□ -1.52
LINC01238-205ENST00000567549 KRTAP6-1Q3LI64 71 aa5.54□□□□□ -1.52
LINC01238-205ENST00000567549 KRTAP5-8O75690 187 aa5.4□□□□□ -1.54
LINC01238-205ENST00000567549 NDUFAF8A1L188 74 aa5.37□□□□□ -1.55
LINC01238-205ENST00000567549 KRTAP6-2Q3LI66 62 aa5.36□□□□□ -1.55
LINC01238-205ENST00000567549 KRTAP9-6A8MVA2 160 aa5.33□□□□□ -1.56
LINC01238-205ENST00000567549 AHNAKQ09666 5890 aaKnown RBP5.29□□□□□ -1.56
LINC01238-205ENST00000567549 MUC5ACP98088 5654 aa5.28□□□□□ -1.56
LINC01238-205ENST00000567549 OBSCNQ5VST9 7968 aa5.27□□□□□ -1.57
LINC01238-205ENST00000567549 MUC5BQ9HC84 5762 aaPredicted RBP5.24□□□□□ -1.57
LINC01238-205ENST00000567549 MT3P25713 68 aa5.23□□□□□ -1.57
LINC01238-205ENST00000567549 KRTAP5-1Q6L8H4 278 aa5.02□□□□□ -1.61
LINC01238-205ENST00000567549 LCE1EQ5T753 118 aa4.85□□□□□ -1.63
LINC01238-205ENST00000567549 LCE1FQ5T754 118 aa4.68□□□□□ -1.66
LINC01238-205ENST00000567549 INE1O15225 51 aa4.53□□□□□ -1.68
LINC01238-205ENST00000567549 LCE1BQ5T7P3 118 aa4.53□□□□□ -1.68
LINC01238-205ENST00000567549 LCE1CQ5T751 118 aa4.48□□□□□ -1.69
LINC01238-205ENST00000567549 KRTAP5-11Q6L8G4 156 aa4.4□□□□□ -1.71
LINC01238-205ENST00000567549 LCE3DQ9BYE3 92 aa4.32□□□□□ -1.72
LINC01238-205ENST00000567549 LCE3EQ5T5B0 92 aa4.21□□□□□ -1.74
LINC01238-205ENST00000567549 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.16□□□□□ -1.74
LINC01238-205ENST00000567549 PHGR1C9JFL3 82 aa3.7□□□□□ -1.82
LINC01238-205ENST00000567549 KRTAP21-2Q3LI59 83 aa3.65□□□□□ -1.83
LINC01238-205ENST00000567549 PRM1P04553 51 aa3.61□□□□□ -1.83
LINC01238-205ENST00000567549 KRTAP4-4Q9BYR3 166 aa3.45□□□□□ -1.86
LINC01238-205ENST00000567549 MUC19Q7Z5P9 8384 aa3.24□□□□□ -1.89
LINC01238-205ENST00000567549 KRTAP21-1Q3LI58 79 aa2.87□□□□□ -1.95
LINC01238-205ENST00000567549 MUC16Q8WXI7 14507 aa2.33□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 11.3 ms