RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 KRTAP5-11Q6L8G4 156 aa3.63□□□□□ -1.83
LSM3P5-201ENST00000566307 USH2AO75445 5202 aa3.55□□□□□ -1.84
LSM3P5-201ENST00000566307 KRTAP2-2Q9BYT5 123 aa3.54□□□□□ -1.84
LSM3P5-201ENST00000566307 KRTAP19-6Q3LI70 58 aa3.53□□□□□ -1.84
LSM3P5-201ENST00000566307 KRTAP10-12P60413 245 aa3.5□□□□□ -1.85
LSM3P5-201ENST00000566307 KRTAP8-1Q8IUC2 63 aa3.48□□□□□ -1.85
LSM3P5-201ENST00000566307 LCE3AQ5TA76 89 aa3.47□□□□□ -1.85
LSM3P5-201ENST00000566307 SSPOA2VEC9 5147 aa3.44□□□□□ -1.86
LSM3P5-201ENST00000566307 LCE1FQ5T754 118 aa3.42□□□□□ -1.86
LSM3P5-201ENST00000566307 LCE1EQ5T753 118 aa3.39□□□□□ -1.87
LSM3P5-201ENST00000566307 KRTAP12-3P60328 96 aa3.35□□□□□ -1.87
LSM3P5-201ENST00000566307 KRTAP19-5Q3LI72 72 aa3.29□□□□□ -1.88
LSM3P5-201ENST00000566307 SPRR5A0A1B0GTR4 108 aa3.27□□□□□ -1.89
LSM3P5-201ENST00000566307 KRTAP19-7Q3SYF9 63 aa3.27□□□□□ -1.89
LSM3P5-201ENST00000566307 CRCT1Q9UGL9 99 aa3.26□□□□□ -1.89
LSM3P5-201ENST00000566307 FCGBPQ9Y6R7 5405 aaPredicted RBP3.26□□□□□ -1.89
LSM3P5-201ENST00000566307 MT1EP04732 61 aa3.21□□□□□ -1.9
LSM3P5-201ENST00000566307 LCE3CQ5T5A8 94 aa3.18□□□□□ -1.9
LSM3P5-201ENST00000566307 KRTAP5-1Q6L8H4 278 aa3.18□□□□□ -1.9
LSM3P5-201ENST00000566307 MT1LQ93083 61 aa3.16□□□□□ -1.9
LSM3P5-201ENST00000566307 FSIP2Q5CZC0 6907 aa3.16□□□□□ -1.9
LSM3P5-201ENST00000566307 KMT2DO14686 5537 aa3.15□□□□□ -1.9
LSM3P5-201ENST00000566307 LUZP6Q538Z0 58 aa3.15□□□□□ -1.91
LSM3P5-201ENST00000566307 KRTAP5-9P26371 169 aa3.11□□□□□ -1.91
LSM3P5-201ENST00000566307 KRTAP19-3Q7Z4W3 81 aa3.09□□□□□ -1.91
LSM3P5-201ENST00000566307 MT1GP13640 62 aa3.08□□□□□ -1.92
LSM3P5-201ENST00000566307 KRTAP5-4Q6L8H1 288 aa3.07□□□□□ -1.92
LSM3P5-201ENST00000566307 KRTAP4-4Q9BYR3 166 aa3.07□□□□□ -1.92
LSM3P5-201ENST00000566307 SPRR2FQ96RM1 72 aa3.06□□□□□ -1.92
LSM3P5-201ENST00000566307 KRTAP6-3Q3LI67 103 aa3.02□□□□□ -1.93
LSM3P5-201ENST00000566307 MT1MQ8N339 61 aa3.02□□□□□ -1.93
LSM3P5-201ENST00000566307 MACF1Q9UPN3 7388 aaKnown RBP2.98□□□□□ -1.93
LSM3P5-201ENST00000566307 KRTAP9-6A8MVA2 160 aa2.97□□□□□ -1.93
LSM3P5-201ENST00000566307 MUC12Q9UKN1 5478 aa2.94□□□□□ -1.94
LSM3P5-201ENST00000566307 LCE3EQ5T5B0 92 aa2.91□□□□□ -1.94
LSM3P5-201ENST00000566307 SPRR2EP22531 72 aa2.9□□□□□ -1.95
LSM3P5-201ENST00000566307 SPRR2BP35325 72 aa2.9□□□□□ -1.95
LSM3P5-201ENST00000566307 SPRR2AP35326 72 aa2.9□□□□□ -1.95
LSM3P5-201ENST00000566307 KRTAP4-3Q9BYR4 195 aa2.88□□□□□ -1.95
LSM3P5-201ENST00000566307 OBSCNQ5VST9 7968 aa2.85□□□□□ -1.95
LSM3P5-201ENST00000566307 SYNE2Q8WXH0 6885 aaKnown RBP2.84□□□□□ -1.95
LSM3P5-201ENST00000566307 KRTAP2-3P0C7H8 128 aa2.81□□□□□ -1.96
LSM3P5-201ENST00000566307 KRTAP2-4Q9BYR9 128 aa2.81□□□□□ -1.96
LSM3P5-201ENST00000566307 KRTAP2-1Q9BYU5 128 aa2.81□□□□□ -1.96
LSM3P5-201ENST00000566307 SPRR2DP22532 72 aa2.8□□□□□ -1.96
LSM3P5-201ENST00000566307 MDN1Q9NU22 5596 aa2.79□□□□□ -1.96
LSM3P5-201ENST00000566307 KRTAP5-5Q701N2 237 aaPredicted RBP2.75□□□□□ -1.97
LSM3P5-201ENST00000566307 MT1AP04731 61 aa2.71□□□□□ -1.98
LSM3P5-201ENST00000566307 NEBP20929 6669 aa2.69□□□□□ -1.98
LSM3P5-201ENST00000566307 KRTAP6-1Q3LI64 71 aa2.63□□□□□ -1.99
LSM3P5-201ENST00000566307 INE1O15225 51 aa2.61□□□□□ -1.99
LSM3P5-201ENST00000566307 DSTQ03001 7570 aaKnown RBP2.59□□□□□ -1.99
LSM3P5-201ENST00000566307 KRTAP5-2Q701N4 177 aa2.58□□□□□ -2
LSM3P5-201ENST00000566307 KRTAP12-4P60329 112 aa2.52□□□□□ -2.01
LSM3P5-201ENST00000566307 KRTAP20-1Q3LI63 56 aa2.52□□□□□ -2.01
LSM3P5-201ENST00000566307 LCE3DQ9BYE3 92 aa2.52□□□□□ -2.01
LSM3P5-201ENST00000566307 SYNE1Q8NF91 8797 aaKnown RBP2.49□□□□□ -2.01
LSM3P5-201ENST00000566307 KRTAP20-2Q3LI61 65 aa2.4□□□□□ -2.03
LSM3P5-201ENST00000566307 KRTAP6-2Q3LI66 62 aa2.4□□□□□ -2.03
LSM3P5-201ENST00000566307 MT4P47944 62 aa2.37□□□□□ -2.03
LSM3P5-201ENST00000566307 HMCN1Q96RW7 5635 aa2.31□□□□□ -2.04
LSM3P5-201ENST00000566307 LCE1CQ5T751 118 aa2.2□□□□□ -2.06
LSM3P5-201ENST00000566307 LCE1BQ5T7P3 118 aa2.2□□□□□ -2.06
LSM3P5-201ENST00000566307 KRTAP5-8O75690 187 aa2.13□□□□□ -2.07
LSM3P5-201ENST00000566307 AHNAK2Q8IVF2 5795 aa2.04□□□□□ -2.08
LSM3P5-201ENST00000566307 KRTAP5-10Q6L8G5 202 aa2.03□□□□□ -2.08
LSM3P5-201ENST00000566307 KRTAP5-7Q6L8G8 165 aa2.02□□□□□ -2.09
LSM3P5-201ENST00000566307 PRM1P04553 51 aa2□□□□□ -2.09
LSM3P5-201ENST00000566307 MUC19Q7Z5P9 8384 aa1.92□□□□□ -2.1
LSM3P5-201ENST00000566307 MUC5ACP98088 5654 aa1.91□□□□□ -2.1
LSM3P5-201ENST00000566307 KRTAP21-2Q3LI59 83 aa1.75□□□□□ -2.13
LSM3P5-201ENST00000566307 GPR98Q8WXG9 6306 aa1.74□□□□□ -2.13
LSM3P5-201ENST00000566307 MUC5BQ9HC84 5762 aaPredicted RBP1.69□□□□□ -2.14
LSM3P5-201ENST00000566307 AHNAKQ09666 5890 aaKnown RBP1.55□□□□□ -2.16
LSM3P5-201ENST00000566307 PHGR1C9JFL3 82 aa1.49□□□□□ -2.17
LSM3P5-201ENST00000566307 KRTAP21-1Q3LI58 79 aa1.29□□□□□ -2.2
LSM3P5-201ENST00000566307 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 57.2 ms