RNA–Protein interactions for RNA: ENST00000565908.6

TCF4-230, Transcript of transcription factor 4, humanhuman

TSL 3

Gene TCF4, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-230ENST00000565908 C10orf95Q9H7T3 257 aa8.75□□□□□ -1.01
TCF4-230ENST00000565908 K7ERS5 55 aa8.7□□□□□ -1.02
TCF4-230ENST00000565908 MT1GP13640 62 aa8.68□□□□□ -1.02
TCF4-230ENST00000565908 DSTQ03001 7570 aaKnown RBP8.67□□□□□ -1.02
TCF4-230ENST00000565908 LCE3AQ5TA76 89 aa8.65□□□□□ -1.02
TCF4-230ENST00000565908 PP632Q6XCG6 107 aa8.63□□□□□ -1.03
TCF4-230ENST00000565908 BRK1Q8WUW1 75 aa8.63□□□□□ -1.03
TCF4-230ENST00000565908 MT1LQ93083 61 aa8.56□□□□□ -1.04
TCF4-230ENST00000565908 MT1MQ8N339 61 aa8.51□□□□□ -1.05
TCF4-230ENST00000565908 KRTAP4-9Q9BYQ8 210 aa8.36□□□□□ -1.07
TCF4-230ENST00000565908 KRTAP12-3P60328 96 aa8.34□□□□□ -1.07
TCF4-230ENST00000565908 KRTAP25-1Q3LHN0 102 aa8.29□□□□□ -1.08
TCF4-230ENST00000565908 KRTAP4-3Q9BYR4 195 aa8.28□□□□□ -1.08
TCF4-230ENST00000565908 PRO0628Q9UI54 55 aa8.27□□□□□ -1.09
TCF4-230ENST00000565908 ROMO1P60602 79 aa8.25□□□□□ -1.09
TCF4-230ENST00000565908 LCE4AQ5TA78 99 aa8.24□□□□□ -1.09
TCF4-230ENST00000565908 LCE1DQ5T752 114 aa8.2□□□□□ -1.1
TCF4-230ENST00000565908 PMAIP1Q13794 54 aa8.15□□□□□ -1.1
TCF4-230ENST00000565908 KRTAP4-7Q9BYR0 210 aa8.12□□□□□ -1.11
TCF4-230ENST00000565908 MT4P47944 62 aa8.11□□□□□ -1.11
TCF4-230ENST00000565908 GPR98Q8WXG9 6306 aa8.09□□□□□ -1.12
TCF4-230ENST00000565908 KRTAP5-4Q6L8H1 288 aa8.08□□□□□ -1.12
TCF4-230ENST00000565908 HMCN1Q96RW7 5635 aa8.07□□□□□ -1.12
TCF4-230ENST00000565908 KRTAP23-1A1A580 65 aa8□□□□□ -1.13
TCF4-230ENST00000565908 KRTAP19-4Q3LI73 84 aa7.92□□□□□ -1.14
TCF4-230ENST00000565908 KRTAP4-6Q9BYQ5 205 aa7.88□□□□□ -1.15
TCF4-230ENST00000565908 KRTAP15-1Q3LI76 137 aa7.82□□□□□ -1.16
TCF4-230ENST00000565908 KRTAP5-5Q701N2 237 aaPredicted RBP7.79□□□□□ -1.16
TCF4-230ENST00000565908 AHNAK2Q8IVF2 5795 aa7.76□□□□□ -1.17
TCF4-230ENST00000565908 KTN1-AS1Q86SY8 53 aa7.72□□□□□ -1.17
TCF4-230ENST00000565908 LOC100996750A0A140TA64 210 aa7.68□□□□□ -1.18
TCF4-230ENST00000565908 LCE3CQ5T5A8 94 aa7.68□□□□□ -1.18
TCF4-230ENST00000565908 PRAC1Q96KF2 57 aa7.65□□□□□ -1.18
TCF4-230ENST00000565908 KRTAP20-2Q3LI61 65 aa7.62□□□□□ -1.19
TCF4-230ENST00000565908 SPRR5A0A1B0GTR4 108 aa7.61□□□□□ -1.19
TCF4-230ENST00000565908 KRTAP12-4P60329 112 aa7.61□□□□□ -1.19
TCF4-230ENST00000565908 KRTAP5-10Q6L8G5 202 aa7.58□□□□□ -1.2
TCF4-230ENST00000565908 SYNE1Q8NF91 8797 aaKnown RBP7.52□□□□□ -1.21
TCF4-230ENST00000565908 KRTAP5-3Q6L8H2 238 aa7.43□□□□□ -1.22
TCF4-230ENST00000565908 MT1AP04731 61 aa7.29□□□□□ -1.24
TCF4-230ENST00000565908 KRTAP5-7Q6L8G8 165 aa7.29□□□□□ -1.24
TCF4-230ENST00000565908 SVIPQ8NHG7 77 aa7.28□□□□□ -1.24
TCF4-230ENST00000565908 KRTAP6-1Q3LI64 71 aa7.23□□□□□ -1.25
TCF4-230ENST00000565908 KRTAP9-6A8MVA2 160 aa7.21□□□□□ -1.26
TCF4-230ENST00000565908 KRTAP5-2Q701N4 177 aa7.1□□□□□ -1.27
TCF4-230ENST00000565908 KRTAP9-4Q9BYQ2 154 aa7.04□□□□□ -1.28
TCF4-230ENST00000565908 KRTAP4-11Q9BYQ6 195 aa6.95□□□□□ -1.3
TCF4-230ENST00000565908 KRTAP6-2Q3LI66 62 aa6.9□□□□□ -1.3
TCF4-230ENST00000565908 KRTAP5-8O75690 187 aa6.7□□□□□ -1.34
TCF4-230ENST00000565908 MT3P25713 68 aa6.68□□□□□ -1.34
TCF4-230ENST00000565908 OBSCNQ5VST9 7968 aa6.57□□□□□ -1.36
TCF4-230ENST00000565908 MUC5BQ9HC84 5762 aaPredicted RBP6.39□□□□□ -1.39
TCF4-230ENST00000565908 KRTAP9-9Q9BYP9 154 aa6.37□□□□□ -1.39
TCF4-230ENST00000565908 AHNAKQ09666 5890 aaKnown RBP6.36□□□□□ -1.39
TCF4-230ENST00000565908 LUZP6Q538Z0 58 aa6.34□□□□□ -1.39
TCF4-230ENST00000565908 KRTAP5-1Q6L8H4 278 aa6.34□□□□□ -1.39
TCF4-230ENST00000565908 MUC5ACP98088 5654 aa6.32□□□□□ -1.4
TCF4-230ENST00000565908 KRTAP4-12Q9BQ66 201 aa6.22□□□□□ -1.41
TCF4-230ENST00000565908 LCE1EQ5T753 118 aa6.13□□□□□ -1.43
TCF4-230ENST00000565908 NDUFAF8A1L188 74 aa5.88□□□□□ -1.47
TCF4-230ENST00000565908 LCE1BQ5T7P3 118 aa5.75□□□□□ -1.49
TCF4-230ENST00000565908 KRTAP4-2Q9BYR5 136 aa5.75□□□□□ -1.49
TCF4-230ENST00000565908 LCE1CQ5T751 118 aa5.68□□□□□ -1.5
TCF4-230ENST00000565908 LCE3DQ9BYE3 92 aa5.55□□□□□ -1.52
TCF4-230ENST00000565908 H3BS24 57 aa5.32□□□□□ -1.56
TCF4-230ENST00000565908 LCE3EQ5T5B0 92 aa5.24□□□□□ -1.57
TCF4-230ENST00000565908 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.18□□□□□ -1.58
TCF4-230ENST00000565908 KRTAP5-11Q6L8G4 156 aa5.14□□□□□ -1.59
TCF4-230ENST00000565908 A0A0A0MQY5 61 aa5.11□□□□□ -1.59
TCF4-230ENST00000565908 LCE1FQ5T754 118 aa5□□□□□ -1.61
TCF4-230ENST00000565908 INE1O15225 51 aa4.9□□□□□ -1.63
TCF4-230ENST00000565908 KRTAP21-2Q3LI59 83 aa4.76□□□□□ -1.65
TCF4-230ENST00000565908 PHGR1C9JFL3 82 aa4.42□□□□□ -1.7
TCF4-230ENST00000565908 KRTAP4-4Q9BYR3 166 aa4.33□□□□□ -1.72
TCF4-230ENST00000565908 PRM1P04553 51 aa4.26□□□□□ -1.73
TCF4-230ENST00000565908 MUC19Q7Z5P9 8384 aa4.06□□□□□ -1.76
TCF4-230ENST00000565908 KRTAP21-1Q3LI58 79 aa3.37□□□□□ -1.87
TCF4-230ENST00000565908 MUC16Q8WXI7 14507 aa2.91□□□□□ -1.94
Retrieved 78 of 20,778 RNA–protein pairs in 143.3 ms